Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 RNU6-1233P-201ENST00000362922 102 ntBASIC0.81□□□□□ -2.28
FOXC1Q12948 MIR124-2-201ENST00000385081 109 ntBASIC0.81□□□□□ -2.28
FOXC1Q12948 CR383656.4-201ENST00000546909 122 ntBASIC0.81□□□□□ -2.28
FOXC1Q12948 MIR6835-201ENST00000621552 64 ntBASIC0.81□□□□□ -2.28
FOXC1Q12948 MIR548H2-201ENST00000408874 88 ntBASIC0.8□□□□□ -2.28
FOXC1Q12948 PSMC1P5-201ENST00000512850 177 ntBASIC0.8□□□□□ -2.28
FOXC1Q12948 AP002795.1-201ENST00000534879 84 ntBASIC0.8□□□□□ -2.28
FOXC1Q12948 RNU6-485P-201ENST00000363475 107 ntBASIC0.79□□□□□ -2.28
FOXC1Q12948 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.79□□□□□ -2.28
FOXC1Q12948 MIR6514-201ENST00000622549 70 ntBASIC0.79□□□□□ -2.28
FOXC1Q12948 MIR103A1-201ENST00000362165 78 ntBASIC0.78□□□□□ -2.28
FOXC1Q12948 SNORD56B-201ENST00000384713 71 ntBASIC0.78□□□□□ -2.28
FOXC1Q12948 RNU6-180P-201ENST00000516697 61 ntBASIC0.78□□□□□ -2.28
FOXC1Q12948 AL627230.5-201ENST00000619807 58 ntBASIC0.78□□□□□ -2.28
FOXC1Q12948 MIR148A-201ENST00000362215 68 ntBASIC0.77□□□□□ -2.29
FOXC1Q12948 RNA5SP193-201ENST00000410353 107 ntBASIC0.77□□□□□ -2.29
FOXC1Q12948 RNU6-300P-201ENST00000459080 104 ntBASIC0.77□□□□□ -2.29
FOXC1Q12948 MIR4711-201ENST00000578274 70 ntBASIC0.77□□□□□ -2.29
FOXC1Q12948 AC103810.9-201ENST00000606688 112 ntBASIC0.77□□□□□ -2.29
FOXC1Q12948 MIR202-201ENST00000362219 110 ntBASIC0.76□□□□□ -2.29
FOXC1Q12948 RNU6-608P-201ENST00000383927 104 ntBASIC0.76□□□□□ -2.29
FOXC1Q12948 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.76□□□□□ -2.29
FOXC1Q12948 RNA5SP169-201ENST00000517268 117 ntBASIC0.76□□□□□ -2.29
FOXC1Q12948 RNA5SP347-201ENST00000362445 119 ntBASIC0.75□□□□□ -2.29
FOXC1Q12948 SNORA17.4-201ENST00000391287 132 ntBASIC0.75□□□□□ -2.29
FOXC1Q12948 RNY3P8-201ENST00000411366 126 ntBASIC0.75□□□□□ -2.29
FOXC1Q12948 RPL39P28-201ENST00000465655 155 ntBASIC0.75□□□□□ -2.29
FOXC1Q12948 SNORA68.3-201ENST00000515906 83 ntBASIC0.75□□□□□ -2.29
FOXC1Q12948 RNU6-815P-201ENST00000384080 113 ntBASIC0.74□□□□□ -2.29
FOXC1Q12948 RNA5SP285-201ENST00000516619 119 ntBASIC0.74□□□□□ -2.29
FOXC1Q12948 MIR6866-201ENST00000638146 69 ntBASIC0.74□□□□□ -2.29
FOXC1Q12948 RNY1P9-201ENST00000532431 109 ntBASIC0.73□□□□□ -2.29
FOXC1Q12948 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.72□□□□□ -2.29
FOXC1Q12948 RNU6-176P-201ENST00000517196 105 ntBASIC0.72□□□□□ -2.29
FOXC1Q12948 SNORD114-2-201ENST00000363953 78 ntBASIC0.71□□□□□ -2.3
FOXC1Q12948 MIR5087-201ENST00000635826 76 ntBASIC0.71□□□□□ -2.3
FOXC1Q12948 MIR643-201ENST00000385267 97 ntBASIC0.7□□□□□ -2.3
FOXC1Q12948 MIR4653-201ENST00000585107 83 ntBASIC0.7□□□□□ -2.3
FOXC1Q12948 MIRLET7D-201ENST00000362263 87 ntBASIC0.69□□□□□ -2.3
FOXC1Q12948 MIR4280-201ENST00000582178 76 ntBASIC0.69□□□□□ -2.3
FOXC1Q12948 MIR2909-201ENST00000617113 69 ntBASIC0.69□□□□□ -2.3
FOXC1Q12948 MIR5683-201ENST00000636514 76 ntBASIC0.69□□□□□ -2.3
FOXC1Q12948 MIR655-201ENST00000362159 97 ntBASIC0.68□□□□□ -2.3
FOXC1Q12948 RNA5SP163-201ENST00000410304 99 ntBASIC0.68□□□□□ -2.3
FOXC1Q12948 AC244250.2-201ENST00000418731 148 ntBASIC0.68□□□□□ -2.3
FOXC1Q12948 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
FOXC1Q12948 SNORA26.4-201ENST00000391188 123 ntBASIC0.67□□□□□ -2.3
FOXC1Q12948 SNORA62.5-201ENST00000516634 120 ntBASIC0.67□□□□□ -2.3
FOXC1Q12948 AC069113.3-201ENST00000521019 150 ntBASIC0.67□□□□□ -2.3
FOXC1Q12948 RNU6-901P-201ENST00000384593 106 ntBASIC0.66□□□□□ -2.3
FOXC1Q12948 MIR146A-201ENST00000385201 99 ntBASIC0.66□□□□□ -2.3
FOXC1Q12948 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.66□□□□□ -2.3
FOXC1Q12948 MIR892B-201ENST00000401279 77 ntBASIC0.66□□□□□ -2.3
FOXC1Q12948 RNU6-351P-201ENST00000516097 100 ntBASIC0.66□□□□□ -2.3
FOXC1Q12948 VTRNA1-3-201ENST00000365645 89 ntBASIC0.65□□□□□ -2.31
FOXC1Q12948 MIR548N-201ENST00000408742 75 ntBASIC0.63□□□□□ -2.31
FOXC1Q12948 AL353691.2-201ENST00000443795 59 ntBASIC0.63□□□□□ -2.31
FOXC1Q12948 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
FOXC1Q12948 SNORD115-33-201ENST00000363723 82 ntBASIC0.62□□□□□ -2.31
FOXC1Q12948 MIR4514-201ENST00000581410 57 ntBASIC0.61□□□□□ -2.31
FOXC1Q12948 MIR4636-201ENST00000582271 80 ntBASIC0.61□□□□□ -2.31
FOXC1Q12948 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
FOXC1Q12948 SNORD60-201ENST00000383903 83 ntBASIC0.6□□□□□ -2.31
FOXC1Q12948 RNA5SP499-201ENST00000363982 119 ntBASIC0.59□□□□□ -2.31
FOXC1Q12948 SNORD74.6-201ENST00000364796 70 ntBASIC0.59□□□□□ -2.31
FOXC1Q12948 RNA5SP63-201ENST00000391225 112 ntBASIC0.59□□□□□ -2.31
FOXC1Q12948 MIR4743-201ENST00000584576 69 ntBASIC0.59□□□□□ -2.31
FOXC1Q12948 RNU7-165P-201ENST00000458864 60 ntBASIC0.58□□□□□ -2.32
FOXC1Q12948 MIR6851-201ENST00000617060 67 ntBASIC0.58□□□□□ -2.32
FOXC1Q12948 AL445193.1-201ENST00000441183 141 ntBASIC0.55□□□□□ -2.32
FOXC1Q12948 SNORD18.2-201ENST00000459604 70 ntBASIC0.55□□□□□ -2.32
FOXC1Q12948 SNORD38.3-201ENST00000516599 73 ntBASIC0.55□□□□□ -2.32
FOXC1Q12948 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC0.55□□□□□ -2.32
FOXC1Q12948 RNU6-30P-201ENST00000384561 107 ntBASIC0.54□□□□□ -2.32
FOXC1Q12948 MIR5589-201ENST00000579442 60 ntBASIC0.54□□□□□ -2.32
FOXC1Q12948 MIR6759-201ENST00000638110 65 ntBASIC0.54□□□□□ -2.32
FOXC1Q12948 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
FOXC1Q12948 AC090625.1-201ENST00000357130 210 ntBASIC0.53□□□□□ -2.32
FOXC1Q12948 RNU6-1327P-201ENST00000365302 105 ntBASIC0.53□□□□□ -2.32
FOXC1Q12948 MIR593-201ENST00000384856 100 ntBASIC0.53□□□□□ -2.32
FOXC1Q12948 MIR581-201ENST00000384895 96 ntBASIC0.53□□□□□ -2.32
FOXC1Q12948 RNU6-68P-201ENST00000516576 104 ntBASIC0.53□□□□□ -2.32
FOXC1Q12948 MIR4315-1-201ENST00000636800 73 ntBASIC0.53□□□□□ -2.32
FOXC1Q12948 MIR4315-2-201ENST00000640925 73 ntBASIC0.53□□□□□ -2.32
FOXC1Q12948 Y_RNA.382-201ENST00000365672 114 ntBASIC0.52□□□□□ -2.33
FOXC1Q12948 AC114737.2-201ENST00000421583 173 ntBASIC0.52□□□□□ -2.33
FOXC1Q12948 snoU13.19-201ENST00000459148 104 ntBASIC0.52□□□□□ -2.33
FOXC1Q12948 MIR145-201ENST00000384967 88 ntBASIC0.5□□□□□ -2.33
FOXC1Q12948 MIR610-201ENST00000385139 96 ntBASIC0.5□□□□□ -2.33
FOXC1Q12948 RPL35AP4-201ENST00000412007 102 ntBASIC0.5□□□□□ -2.33
FOXC1Q12948 MIR4802-201ENST00000581881 80 ntBASIC0.5□□□□□ -2.33
FOXC1Q12948 AC023932.2-201ENST00000603176 175 ntBASIC0.5□□□□□ -2.33
FOXC1Q12948 AC013734.1-201ENST00000619329 111 ntBASIC0.5□□□□□ -2.33
FOXC1Q12948 Y_RNA.134-201ENST00000363435 105 ntBASIC0.47□□□□□ -2.33
FOXC1Q12948 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.47□□□□□ -2.33
FOXC1Q12948 RNU7-159P-201ENST00000459284 62 ntBASIC0.47□□□□□ -2.33
FOXC1Q12948 Y_RNA.129-201ENST00000363392 110 ntBASIC0.46□□□□□ -2.34
FOXC1Q12948 MIR518B-201ENST00000385127 83 ntBASIC0.46□□□□□ -2.34
FOXC1Q12948 MIR92A1-201ENST00000385233 78 ntBASIC0.46□□□□□ -2.34
FOXC1Q12948 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 236.4 ms