Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 RNU7-88P-201ENST00000458752 63 ntBASIC0.6□□□□□ -2.31
PRIM1P49642 MIR4514-201ENST00000581410 57 ntBASIC0.59□□□□□ -2.31
PRIM1P49642 MIR6854-201ENST00000614935 69 ntBASIC0.59□□□□□ -2.31
PRIM1P49642 AL627230.5-201ENST00000619807 58 ntBASIC0.59□□□□□ -2.31
PRIM1P49642 RNA5SP63-201ENST00000391225 112 ntBASIC0.58□□□□□ -2.32
PRIM1P49642 MIR548AL-201ENST00000578416 97 ntBASIC0.58□□□□□ -2.32
PRIM1P49642 MIR6507-201ENST00000613630 70 ntBASIC0.58□□□□□ -2.32
PRIM1P49642 RNU6-1111P-201ENST00000391118 107 ntBASIC0.56□□□□□ -2.32
PRIM1P49642 SNORA50A-201ENST00000384225 134 ntBASIC0.55□□□□□ -2.32
PRIM1P49642 Y_RNA.139-201ENST00000363464 102 ntBASIC0.54□□□□□ -2.32
PRIM1P49642 RNU7-159P-201ENST00000459284 62 ntBASIC0.54□□□□□ -2.32
PRIM1P49642 RNU6-732P-201ENST00000516033 103 ntBASIC0.53□□□□□ -2.32
PRIM1P49642 RNU7-165P-201ENST00000458864 60 ntBASIC0.52□□□□□ -2.33
PRIM1P49642 RNU6-1238P-201ENST00000517215 102 ntBASIC0.52□□□□□ -2.33
PRIM1P49642 MIR545-201ENST00000385085 106 ntBASIC0.51□□□□□ -2.33
PRIM1P49642 MIR548H2-201ENST00000408874 88 ntBASIC0.51□□□□□ -2.33
PRIM1P49642 SNORA42.1-201ENST00000363515 137 ntBASIC0.5□□□□□ -2.33
PRIM1P49642 RNU6-1204P-201ENST00000363948 107 ntBASIC0.5□□□□□ -2.33
PRIM1P49642 MIR3170-201ENST00000582699 77 ntBASIC0.5□□□□□ -2.33
PRIM1P49642 AC023932.2-201ENST00000603176 175 ntBASIC0.5□□□□□ -2.33
PRIM1P49642 RNU6-1233P-201ENST00000362922 102 ntBASIC0.49□□□□□ -2.33
PRIM1P49642 RNU6-46P-201ENST00000383860 107 ntBASIC0.49□□□□□ -2.33
PRIM1P49642 SNORD63.2-201ENST00000516303 64 ntBASIC0.47□□□□□ -2.33
PRIM1P49642 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.47□□□□□ -2.33
PRIM1P49642 snoU13.19-201ENST00000459148 104 ntBASIC0.46□□□□□ -2.34
PRIM1P49642 SNORD74.6-201ENST00000364796 70 ntBASIC0.45□□□□□ -2.34
PRIM1P49642 MIR593-201ENST00000384856 100 ntBASIC0.45□□□□□ -2.34
PRIM1P49642 MIR5704-201ENST00000584029 77 ntBASIC0.45□□□□□ -2.34
PRIM1P49642 MIR145-201ENST00000384967 88 ntBASIC0.44□□□□□ -2.34
PRIM1P49642 MIR124-2-201ENST00000385081 109 ntBASIC0.44□□□□□ -2.34
PRIM1P49642 AC244250.2-201ENST00000418731 148 ntBASIC0.44□□□□□ -2.34
PRIM1P49642 AC104692.1-201ENST00000472406 90 ntBASIC0.44□□□□□ -2.34
PRIM1P49642 RNA5SP134-201ENST00000516492 96 ntBASIC0.44□□□□□ -2.34
PRIM1P49642 MIR4636-201ENST00000582271 80 ntBASIC0.44□□□□□ -2.34
PRIM1P49642 MIR1468-201ENST00000410600 86 ntBASIC0.43□□□□□ -2.34
PRIM1P49642 MIR6718-201ENST00000616153 80 ntBASIC0.43□□□□□ -2.34
PRIM1P49642 MTRNR2L9-201ENST00000622562 75 ntBASIC0.43□□□□□ -2.34
PRIM1P49642 MIR6759-201ENST00000638110 65 ntBASIC0.43□□□□□ -2.34
PRIM1P49642 SNORD56B-201ENST00000384713 71 ntBASIC0.42□□□□□ -2.34
PRIM1P49642 MIR548Q-201ENST00000408404 100 ntBASIC0.42□□□□□ -2.34
PRIM1P49642 MIR5589-201ENST00000579442 60 ntBASIC0.42□□□□□ -2.34
PRIM1P49642 RNA5SP214-201ENST00000363378 118 ntBASIC0.4□□□□□ -2.35
PRIM1P49642 RNU6-30P-201ENST00000384561 107 ntBASIC0.4□□□□□ -2.35
PRIM1P49642 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.4□□□□□ -2.35
PRIM1P49642 Y_RNA.699-201ENST00000516803 93 ntBASIC0.4□□□□□ -2.35
PRIM1P49642 AC114755.3-201ENST00000481111 251 ntBASIC0.39□□□□□ -2.35
PRIM1P49642 SNORA27.2-201ENST00000363365 126 ntBASIC0.38□□□□□ -2.35
PRIM1P49642 MIR8068-201ENST00000618032 68 ntBASIC0.38□□□□□ -2.35
PRIM1P49642 Y_RNA.185-201ENST00000363894 100 ntBASIC0.37□□□□□ -2.35
PRIM1P49642 MIR29B1-201ENST00000385015 81 ntBASIC0.36□□□□□ -2.35
PRIM1P49642 MIR655-201ENST00000362159 97 ntBASIC0.35□□□□□ -2.35
PRIM1P49642 SNORD49B-201ENST00000365172 72 ntBASIC0.35□□□□□ -2.35
PRIM1P49642 MIR4263-201ENST00000584745 83 ntBASIC0.34□□□□□ -2.36
PRIM1P49642 SNORD114-9-201ENST00000364370 72 ntBASIC0.33□□□□□ -2.36
PRIM1P49642 MIR4280-201ENST00000582178 76 ntBASIC0.33□□□□□ -2.36
PRIM1P49642 MIR6851-201ENST00000617060 67 ntBASIC0.33□□□□□ -2.36
PRIM1P49642 RNU6-530P-201ENST00000391180 107 ntBASIC0.32□□□□□ -2.36
PRIM1P49642 SNORA13-201ENST00000458790 133 ntBASIC0.32□□□□□ -2.36
PRIM1P49642 RNU6-742P-201ENST00000365289 107 ntBASIC0.31□□□□□ -2.36
PRIM1P49642 RNU6-974P-201ENST00000384099 108 ntBASIC0.31□□□□□ -2.36
PRIM1P49642 AL445193.1-201ENST00000441183 141 ntBASIC0.31□□□□□ -2.36
PRIM1P49642 RNA5SP66-201ENST00000517178 101 ntBASIC0.31□□□□□ -2.36
PRIM1P49642 MIR1295B-201ENST00000636144 60 ntBASIC0.31□□□□□ -2.36
PRIM1P49642 Z95118.1-201ENST00000421372 247 ntBASIC0.3□□□□□ -2.36
PRIM1P49642 AL353691.2-201ENST00000443795 59 ntBASIC0.3□□□□□ -2.36
PRIM1P49642 SNORD18.2-201ENST00000459604 70 ntBASIC0.3□□□□□ -2.36
PRIM1P49642 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.3□□□□□ -2.36
PRIM1P49642 SNORD115-33-201ENST00000363723 82 ntBASIC0.29□□□□□ -2.36
PRIM1P49642 SNORA26.4-201ENST00000391188 123 ntBASIC0.29□□□□□ -2.36
PRIM1P49642 MIR4802-201ENST00000581881 80 ntBASIC0.29□□□□□ -2.36
PRIM1P49642 MIR518B-201ENST00000385127 83 ntBASIC0.28□□□□□ -2.36
PRIM1P49642 SNORD19-201ENST00000391191 68 ntBASIC0.28□□□□□ -2.36
PRIM1P49642 MIR5093-201ENST00000583199 100 ntBASIC0.28□□□□□ -2.36
PRIM1P49642 AC093726.3-201ENST00000637588 150 ntBASIC0.28□□□□□ -2.36
PRIM1P49642 MIR5190-201ENST00000581537 80 ntBASIC0.27□□□□□ -2.37
PRIM1P49642 RNU6-822P-201ENST00000362707 106 ntBASIC0.26□□□□□ -2.37
PRIM1P49642 RNU6-721P-201ENST00000410155 105 ntBASIC0.26□□□□□ -2.37
PRIM1P49642 RNA5SP169-201ENST00000517268 117 ntBASIC0.25□□□□□ -2.37
PRIM1P49642 SNORD114-5-201ENST00000362928 70 ntBASIC0.24□□□□□ -2.37
PRIM1P49642 MIR371B-201ENST00000638082 66 ntBASIC0.24□□□□□ -2.37
PRIM1P49642 RNA5SP368-201ENST00000364298 116 ntBASIC0.23□□□□□ -2.37
PRIM1P49642 RNU6-1250P-201ENST00000391218 107 ntBASIC0.23□□□□□ -2.37
PRIM1P49642 RNA5SP25-201ENST00000410815 110 ntBASIC0.23□□□□□ -2.37
PRIM1P49642 RNU6-758P-201ENST00000516292 89 ntBASIC0.23□□□□□ -2.37
PRIM1P49642 MIR4768-201ENST00000585270 74 ntBASIC0.23□□□□□ -2.37
PRIM1P49642 MIR5683-201ENST00000636514 76 ntBASIC0.23□□□□□ -2.37
PRIM1P49642 SNORA18.1-201ENST00000363418 128 ntBASIC0.21□□□□□ -2.38
PRIM1P49642 RNA5SP67-201ENST00000516422 131 ntBASIC0.21□□□□□ -2.38
PRIM1P49642 RNU6-986P-201ENST00000363133 102 ntBASIC0.2□□□□□ -2.38
PRIM1P49642 SNORD114-15-201ENST00000364687 72 ntBASIC0.2□□□□□ -2.38
PRIM1P49642 RNY1P9-201ENST00000532431 109 ntBASIC0.2□□□□□ -2.38
PRIM1P49642 RNU6-929P-201ENST00000384429 107 ntBASIC0.19□□□□□ -2.38
PRIM1P49642 MIR520D-201ENST00000385002 87 ntBASIC0.19□□□□□ -2.38
PRIM1P49642 SNORD38.3-201ENST00000516599 73 ntBASIC0.19□□□□□ -2.38
PRIM1P49642 IGLVI-20-201ENST00000519296 130 ntBASIC0.19□□□□□ -2.38
PRIM1P49642 MIR4290-201ENST00000583807 95 ntBASIC0.19□□□□□ -2.38
PRIM1P49642 MIR4317-201ENST00000637586 65 ntBASIC0.19□□□□□ -2.38
PRIM1P49642 SNORD114-31-201ENST00000363219 75 ntBASIC0.18□□□□□ -2.38
PRIM1P49642 MIR1295A-201ENST00000408463 79 ntBASIC0.18□□□□□ -2.38
PRIM1P49642 RNU6-176P-201ENST00000517196 105 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 174.2 ms