Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 MIR429-201ENST00000362106 83 ntBASIC-1.3□□□□□ -2.62
SDC3O75056 RNU6-668P-201ENST00000364180 107 ntBASIC-1.3□□□□□ -2.62
SDC3O75056 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.3□□□□□ -2.62
SDC3O75056 MIR8053-201ENST00000613344 75 ntBASIC-1.3□□□□□ -2.62
SDC3O75056 RNU6-315P-201ENST00000362666 107 ntBASIC-1.31□□□□□ -2.62
SDC3O75056 MIR8485-201ENST00000401372 91 ntBASIC-1.31□□□□□ -2.62
SDC3O75056 RNU6-789P-201ENST00000517105 102 ntBASIC-1.31□□□□□ -2.62
SDC3O75056 MIR3165-201ENST00000579874 75 ntBASIC-1.31□□□□□ -2.62
SDC3O75056 RNU6-598P-201ENST00000364017 105 ntBASIC-1.32□□□□□ -2.62
SDC3O75056 U2.18-201ENST00000622185 84 ntBASIC-1.32□□□□□ -2.62
SDC3O75056 RNU6-979P-201ENST00000383896 107 ntBASIC-1.33□□□□□ -2.62
SDC3O75056 AC090616.4-201ENST00000448026 115 ntBASIC-1.33□□□□□ -2.62
SDC3O75056 AC091912.2-201ENST00000624798 167 ntBASIC-1.33□□□□□ -2.62
SDC3O75056 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.34□□□□□ -2.62
SDC3O75056 RNU6-164P-201ENST00000364604 103 ntBASIC-1.34□□□□□ -2.62
SDC3O75056 RNU6-630P-201ENST00000391258 106 ntBASIC-1.34□□□□□ -2.62
SDC3O75056 RNY4P30-201ENST00000410216 95 ntBASIC-1.34□□□□□ -2.62
SDC3O75056 RNU6-406P-201ENST00000516470 107 ntBASIC-1.34□□□□□ -2.62
SDC3O75056 MIR6874-201ENST00000635894 71 ntBASIC-1.34□□□□□ -2.62
SDC3O75056 SNORD113-2-201ENST00000391082 72 ntBASIC-1.35□□□□□ -2.63
SDC3O75056 MIR889-201ENST00000401280 79 ntBASIC-1.35□□□□□ -2.63
SDC3O75056 MIR3115-201ENST00000577915 68 ntBASIC-1.35□□□□□ -2.63
SDC3O75056 RNA5SP215-201ENST00000363440 122 ntBASIC-1.36□□□□□ -2.63
SDC3O75056 RNU6-706P-201ENST00000517229 104 ntBASIC-1.36□□□□□ -2.63
SDC3O75056 MIR4712-201ENST00000583750 82 ntBASIC-1.36□□□□□ -2.63
SDC3O75056 MIR494-201ENST00000349529 81 ntBASIC-1.37□□□□□ -2.63
SDC3O75056 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.37□□□□□ -2.63
SDC3O75056 MIR548AI-201ENST00000579940 88 ntBASIC-1.37□□□□□ -2.63
SDC3O75056 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.38□□□□□ -2.63
SDC3O75056 MIR520D-201ENST00000385002 87 ntBASIC-1.38□□□□□ -2.63
SDC3O75056 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.38□□□□□ -2.63
SDC3O75056 RNU7-171P-201ENST00000459581 62 ntBASIC-1.38□□□□□ -2.63
SDC3O75056 AC138207.3-201ENST00000585289 166 ntBASIC-1.38□□□□□ -2.63
SDC3O75056 SNORD116-16-201ENST00000384533 92 ntBASIC-1.39□□□□□ -2.63
SDC3O75056 RNU6-70P-201ENST00000516438 60 ntBASIC-1.39□□□□□ -2.63
SDC3O75056 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.4□□□□□ -2.63
SDC3O75056 RNU6-608P-201ENST00000383927 104 ntBASIC-1.4□□□□□ -2.63
SDC3O75056 SNORA41B-201ENST00000384785 128 ntBASIC-1.4□□□□□ -2.63
SDC3O75056 MIR154-201ENST00000385243 84 ntBASIC-1.4□□□□□ -2.63
SDC3O75056 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.4□□□□□ -2.63
SDC3O75056 MIR1245B-201ENST00000636115 69 ntBASIC-1.4□□□□□ -2.63
SDC3O75056 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.41□□□□□ -2.64
SDC3O75056 MIR4723-201ENST00000585070 81 ntBASIC-1.41□□□□□ -2.64
SDC3O75056 RNA5SP173-201ENST00000364857 136 ntBASIC-1.42□□□□□ -2.64
SDC3O75056 RNU6-895P-201ENST00000384125 103 ntBASIC-1.42□□□□□ -2.64
SDC3O75056 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.42□□□□□ -2.64
SDC3O75056 RNA5SP461-201ENST00000516451 104 ntBASIC-1.42□□□□□ -2.64
SDC3O75056 U2.22-201ENST00000636441 106 ntBASIC-1.42□□□□□ -2.64
SDC3O75056 SNORD1B-201ENST00000363091 84 ntBASIC-1.43□□□□□ -2.64
SDC3O75056 RNU6-153P-201ENST00000364422 104 ntBASIC-1.43□□□□□ -2.64
SDC3O75056 AC018880.2-201ENST00000414265 201 ntBASIC-1.43□□□□□ -2.64
SDC3O75056 RNU6-242P-201ENST00000384359 107 ntBASIC-1.44□□□□□ -2.64
SDC3O75056 SNORD116-24-201ENST00000384549 92 ntBASIC-1.44□□□□□ -2.64
SDC3O75056 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.44□□□□□ -2.64
SDC3O75056 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.45□□□□□ -2.64
SDC3O75056 SNORD115-31-201ENST00000365318 82 ntBASIC-1.45□□□□□ -2.64
SDC3O75056 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.45□□□□□ -2.64
SDC3O75056 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.45□□□□□ -2.64
SDC3O75056 MIR548AA1-201ENST00000384971 97 ntBASIC-1.45□□□□□ -2.64
SDC3O75056 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.45□□□□□ -2.64
SDC3O75056 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.45□□□□□ -2.64
SDC3O75056 MIR4520-1-201ENST00000582609 70 ntBASIC-1.45□□□□□ -2.64
SDC3O75056 MIR3170-201ENST00000582699 77 ntBASIC-1.45□□□□□ -2.64
SDC3O75056 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.45□□□□□ -2.64
SDC3O75056 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.45□□□□□ -2.64
SDC3O75056 U4.2-201ENST00000618561 85 ntBASIC-1.45□□□□□ -2.64
SDC3O75056 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.46□□□□□ -2.64
SDC3O75056 MIR3134-201ENST00000579433 74 ntBASIC-1.46□□□□□ -2.64
SDC3O75056 RNU6-294P-201ENST00000364999 102 ntBASIC-1.47□□□□□ -2.64
SDC3O75056 MIR450A2-201ENST00000385022 100 ntBASIC-1.47□□□□□ -2.64
SDC3O75056 HLA-S-202ENST00000425174 53 ntBASIC-1.47□□□□□ -2.64
SDC3O75056 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.47□□□□□ -2.64
SDC3O75056 MIR5591-201ENST00000578248 65 ntBASIC-1.47□□□□□ -2.64
SDC3O75056 MIR6502-201ENST00000617296 76 ntBASIC-1.47□□□□□ -2.64
SDC3O75056 RNU6-247P-201ENST00000362636 107 ntBASIC-1.48□□□□□ -2.65
SDC3O75056 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.48□□□□□ -2.65
SDC3O75056 MIR579-201ENST00000385221 98 ntBASIC-1.49□□□□□ -2.65
SDC3O75056 MIR365A-201ENST00000362260 87 ntBASIC-1.5□□□□□ -2.65
SDC3O75056 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.5□□□□□ -2.65
SDC3O75056 RNA5SP180-201ENST00000516181 101 ntBASIC-1.5□□□□□ -2.65
SDC3O75056 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.5□□□□□ -2.65
SDC3O75056 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.5□□□□□ -2.65
SDC3O75056 MIR4666B-201ENST00000578142 81 ntBASIC-1.5□□□□□ -2.65
SDC3O75056 MIR1285-2-201ENST00000408311 88 ntBASIC-1.51□□□□□ -2.65
SDC3O75056 RNU6-172P-201ENST00000411000 93 ntBASIC-1.51□□□□□ -2.65
SDC3O75056 RNU7-151P-201ENST00000516930 53 ntBASIC-1.51□□□□□ -2.65
SDC3O75056 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.51□□□□□ -2.65
SDC3O75056 RNU6-258P-201ENST00000390884 101 ntBASIC-1.52□□□□□ -2.65
SDC3O75056 RNU6-995P-201ENST00000391244 107 ntBASIC-1.52□□□□□ -2.65
SDC3O75056 RNU6-687P-201ENST00000516443 89 ntBASIC-1.52□□□□□ -2.65
SDC3O75056 MIR4770-201ENST00000579149 58 ntBASIC-1.52□□□□□ -2.65
SDC3O75056 RNU6-787P-201ENST00000384032 107 ntBASIC-1.53□□□□□ -2.65
SDC3O75056 MIR5582-201ENST00000579697 68 ntBASIC-1.53□□□□□ -2.65
SDC3O75056 RNU6-79P-201ENST00000362511 107 ntBASIC-1.54□□□□□ -2.66
SDC3O75056 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.54□□□□□ -2.66
SDC3O75056 RNU6-400P-201ENST00000391173 106 ntBASIC-1.54□□□□□ -2.66
SDC3O75056 SNORD114-3-201ENST00000364969 75 ntBASIC-1.55□□□□□ -2.66
SDC3O75056 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.55□□□□□ -2.66
SDC3O75056 MIR4441-201ENST00000582623 100 ntBASIC-1.55□□□□□ -2.66
SDC3O75056 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.56□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 227.4 ms