Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 RNU6-972P-201ENST00000391208 107 ntBASIC-1.55□□□□□ -2.66
TREX1Q9NSU2 U4.4-201ENST00000620626 117 ntBASIC-1.55□□□□□ -2.66
TREX1Q9NSU2 RNU6-766P-201ENST00000362478 107 ntBASIC-1.56□□□□□ -2.66
TREX1Q9NSU2 RNU6-698P-201ENST00000363523 107 ntBASIC-1.56□□□□□ -2.66
TREX1Q9NSU2 RNU6-34P-201ENST00000364874 107 ntBASIC-1.56□□□□□ -2.66
TREX1Q9NSU2 MIR548AA1-201ENST00000384971 97 ntBASIC-1.56□□□□□ -2.66
TREX1Q9NSU2 RNU6-772P-201ENST00000516042 105 ntBASIC-1.56□□□□□ -2.66
TREX1Q9NSU2 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.56□□□□□ -2.66
TREX1Q9NSU2 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.56□□□□□ -2.66
TREX1Q9NSU2 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.56□□□□□ -2.66
TREX1Q9NSU2 MIR548W-201ENST00000581970 74 ntBASIC-1.56□□□□□ -2.66
TREX1Q9NSU2 AC013734.1-201ENST00000619329 111 ntBASIC-1.56□□□□□ -2.66
TREX1Q9NSU2 SNORD115-31-201ENST00000365318 82 ntBASIC-1.57□□□□□ -2.66
TREX1Q9NSU2 RNU6-887P-201ENST00000410660 100 ntBASIC-1.57□□□□□ -2.66
TREX1Q9NSU2 RNU7-153P-201ENST00000516455 62 ntBASIC-1.57□□□□□ -2.66
TREX1Q9NSU2 RNU6-118P-201ENST00000516552 102 ntBASIC-1.57□□□□□ -2.66
TREX1Q9NSU2 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.57□□□□□ -2.66
TREX1Q9NSU2 MIR3139-201ENST00000579145 76 ntBASIC-1.57□□□□□ -2.66
TREX1Q9NSU2 SNORD77.2-201ENST00000391045 68 ntBASIC-1.58□□□□□ -2.66
TREX1Q9NSU2 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.58□□□□□ -2.66
TREX1Q9NSU2 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.58□□□□□ -2.66
TREX1Q9NSU2 snoU13.10-201ENST00000459301 103 ntBASIC-1.58□□□□□ -2.66
TREX1Q9NSU2 RNU6-426P-201ENST00000516464 97 ntBASIC-1.58□□□□□ -2.66
TREX1Q9NSU2 MIR4748-201ENST00000578076 82 ntBASIC-1.58□□□□□ -2.66
TREX1Q9NSU2 MIR466-201ENST00000580653 84 ntBASIC-1.58□□□□□ -2.66
TREX1Q9NSU2 AC005520.4-201ENST00000604337 90 ntBASIC-1.58□□□□□ -2.66
TREX1Q9NSU2 SNORD116-10-201ENST00000363791 102 ntBASIC-1.59□□□□□ -2.66
TREX1Q9NSU2 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.59□□□□□ -2.66
TREX1Q9NSU2 RNU6-537P-201ENST00000517277 103 ntBASIC-1.59□□□□□ -2.66
TREX1Q9NSU2 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.59□□□□□ -2.66
TREX1Q9NSU2 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.59□□□□□ -2.66
TREX1Q9NSU2 RNU6-247P-201ENST00000362636 107 ntBASIC-1.6□□□□□ -2.67
TREX1Q9NSU2 MIR548V-201ENST00000584165 80 ntBASIC-1.6□□□□□ -2.67
TREX1Q9NSU2 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.6□□□□□ -2.67
TREX1Q9NSU2 SNORA27.2-201ENST00000363365 126 ntBASIC-1.61□□□□□ -2.67
TREX1Q9NSU2 RNU6-379P-201ENST00000363813 104 ntBASIC-1.61□□□□□ -2.67
TREX1Q9NSU2 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.61□□□□□ -2.67
TREX1Q9NSU2 SNORD116-16-201ENST00000384533 92 ntBASIC-1.61□□□□□ -2.67
TREX1Q9NSU2 MTND4LP9-201ENST00000427694 174 ntBASIC-1.61□□□□□ -2.67
TREX1Q9NSU2 RNU6-388P-201ENST00000517012 105 ntBASIC-1.61□□□□□ -2.67
TREX1Q9NSU2 RNU6-389P-201ENST00000517048 105 ntBASIC-1.61□□□□□ -2.67
TREX1Q9NSU2 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.62□□□□□ -2.67
TREX1Q9NSU2 U6.97-201ENST00000636904 101 ntBASIC-1.62□□□□□ -2.67
TREX1Q9NSU2 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.63□□□□□ -2.67
TREX1Q9NSU2 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.63□□□□□ -2.67
TREX1Q9NSU2 SCARNA23-201ENST00000516060 130 ntBASIC-1.63□□□□□ -2.67
TREX1Q9NSU2 RNU6-982P-201ENST00000516216 102 ntBASIC-1.63□□□□□ -2.67
TREX1Q9NSU2 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.63□□□□□ -2.67
TREX1Q9NSU2 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.63□□□□□ -2.67
TREX1Q9NSU2 FTX_4.1-201ENST00000616291 147 ntBASIC-1.63□□□□□ -2.67
TREX1Q9NSU2 SNORD1B-201ENST00000363091 84 ntBASIC-1.64□□□□□ -2.67
TREX1Q9NSU2 RNU6-463P-201ENST00000384340 107 ntBASIC-1.64□□□□□ -2.67
TREX1Q9NSU2 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.64□□□□□ -2.67
TREX1Q9NSU2 MT-TM-201ENST00000387377 68 ntBASIC-1.64□□□□□ -2.67
TREX1Q9NSU2 SNORD113-2-201ENST00000391082 72 ntBASIC-1.64□□□□□ -2.67
TREX1Q9NSU2 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.64□□□□□ -2.67
TREX1Q9NSU2 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.64□□□□□ -2.67
TREX1Q9NSU2 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.64□□□□□ -2.67
TREX1Q9NSU2 MTND5P41-201ENST00000517498 206 ntBASIC-1.64□□□□□ -2.67
TREX1Q9NSU2 MIR3675-201ENST00000583661 73 ntBASIC-1.64□□□□□ -2.67
TREX1Q9NSU2 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.64□□□□□ -2.67
TREX1Q9NSU2 SNORD18C-201ENST00000362704 69 ntBASIC-1.65□□□□□ -2.67
TREX1Q9NSU2 RNU6-669P-201ENST00000365575 107 ntBASIC-1.65□□□□□ -2.67
TREX1Q9NSU2 SNORA40-201ENST00000388090 126 ntBASIC-1.65□□□□□ -2.67
TREX1Q9NSU2 RNU7-107P-201ENST00000459121 61 ntBASIC-1.65□□□□□ -2.67
TREX1Q9NSU2 AC097484.2-201ENST00000509147 251 ntBASIC-1.65□□□□□ -2.67
TREX1Q9NSU2 RNU6-904P-201ENST00000516206 101 ntBASIC-1.65□□□□□ -2.67
TREX1Q9NSU2 RNU6-330P-201ENST00000363015 107 ntBASIC-1.66□□□□□ -2.68
TREX1Q9NSU2 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.66□□□□□ -2.68
TREX1Q9NSU2 MIR630-201ENST00000384957 97 ntBASIC-1.66□□□□□ -2.68
TREX1Q9NSU2 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.66□□□□□ -2.68
TREX1Q9NSU2 RNU6-604P-201ENST00000390917 100 ntBASIC-1.66□□□□□ -2.68
TREX1Q9NSU2 RNY3P8-201ENST00000411366 126 ntBASIC-1.66□□□□□ -2.68
TREX1Q9NSU2 RNU7-151P-201ENST00000516930 53 ntBASIC-1.66□□□□□ -2.68
TREX1Q9NSU2 RNU6-624P-201ENST00000363411 107 ntBASIC-1.67□□□□□ -2.68
TREX1Q9NSU2 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.67□□□□□ -2.68
TREX1Q9NSU2 SNORA41B-201ENST00000384785 128 ntBASIC-1.67□□□□□ -2.68
TREX1Q9NSU2 MIR519C-201ENST00000385053 87 ntBASIC-1.67□□□□□ -2.68
TREX1Q9NSU2 RNU6-995P-201ENST00000391244 107 ntBASIC-1.67□□□□□ -2.68
TREX1Q9NSU2 SNORD63.2-201ENST00000516303 64 ntBASIC-1.67□□□□□ -2.68
TREX1Q9NSU2 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.68□□□□□ -2.68
TREX1Q9NSU2 RNA5SP215-201ENST00000363440 122 ntBASIC-1.68□□□□□ -2.68
TREX1Q9NSU2 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.68□□□□□ -2.68
TREX1Q9NSU2 RNU6-523P-201ENST00000516304 54 ntBASIC-1.68□□□□□ -2.68
TREX1Q9NSU2 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.68□□□□□ -2.68
TREX1Q9NSU2 MIR7978-201ENST00000636158 59 ntBASIC-1.68□□□□□ -2.68
TREX1Q9NSU2 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.69□□□□□ -2.68
TREX1Q9NSU2 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.69□□□□□ -2.68
TREX1Q9NSU2 RNU6-694P-201ENST00000364071 147 ntBASIC-1.69□□□□□ -2.68
TREX1Q9NSU2 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.69□□□□□ -2.68
TREX1Q9NSU2 RNU6-119P-201ENST00000364882 107 ntBASIC-1.69□□□□□ -2.68
TREX1Q9NSU2 SNORA8.1-201ENST00000384250 140 ntBASIC-1.69□□□□□ -2.68
TREX1Q9NSU2 MIR125B1-201ENST00000385236 88 ntBASIC-1.69□□□□□ -2.68
TREX1Q9NSU2 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.69□□□□□ -2.68
TREX1Q9NSU2 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.69□□□□□ -2.68
TREX1Q9NSU2 RNU7-61P-201ENST00000515897 61 ntBASIC-1.69□□□□□ -2.68
TREX1Q9NSU2 RNU6-182P-201ENST00000516970 105 ntBASIC-1.69□□□□□ -2.68
TREX1Q9NSU2 AL353621.2-201ENST00000605340 133 ntBASIC-1.69□□□□□ -2.68
TREX1Q9NSU2 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.69□□□□□ -2.68
TREX1Q9NSU2 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.69□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 220.9 ms