Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.38□□□□□ -2.35
KRTAP3-1Q9BYR8 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
KRTAP3-1Q9BYR8 RNA5SP325-201ENST00000363756 130 ntBASIC0.37□□□□□ -2.35
KRTAP3-1Q9BYR8 RNA5SP99-201ENST00000364020 114 ntBASIC0.37□□□□□ -2.35
KRTAP3-1Q9BYR8 RNU6-180P-201ENST00000516697 61 ntBASIC0.37□□□□□ -2.35
KRTAP3-1Q9BYR8 MIR5704-201ENST00000584029 77 ntBASIC0.37□□□□□ -2.35
KRTAP3-1Q9BYR8 MIR6857-201ENST00000613267 93 ntBASIC0.37□□□□□ -2.35
KRTAP3-1Q9BYR8 MTRNR2L9-201ENST00000622562 75 ntBASIC0.37□□□□□ -2.35
KRTAP3-1Q9BYR8 AC090625.1-201ENST00000357130 210 ntBASIC0.36□□□□□ -2.35
KRTAP3-1Q9BYR8 MIR610-201ENST00000385139 96 ntBASIC0.36□□□□□ -2.35
KRTAP3-1Q9BYR8 MIR6767-201ENST00000637302 66 ntBASIC0.36□□□□□ -2.35
KRTAP3-1Q9BYR8 RNU6-1233P-201ENST00000362922 102 ntBASIC0.35□□□□□ -2.35
KRTAP3-1Q9BYR8 SNORD114-27-201ENST00000363766 70 ntBASIC0.35□□□□□ -2.35
KRTAP3-1Q9BYR8 Y_RNA.327-201ENST00000365201 102 ntBASIC0.35□□□□□ -2.35
KRTAP3-1Q9BYR8 RNU6-1327P-201ENST00000365302 105 ntBASIC0.35□□□□□ -2.35
KRTAP3-1Q9BYR8 MIR548Q-201ENST00000408404 100 ntBASIC0.35□□□□□ -2.35
KRTAP3-1Q9BYR8 MIR6507-201ENST00000613630 70 ntBASIC0.35□□□□□ -2.35
KRTAP3-1Q9BYR8 MIR6866-201ENST00000638146 69 ntBASIC0.35□□□□□ -2.35
KRTAP3-1Q9BYR8 RNU6-986P-201ENST00000363133 102 ntBASIC0.34□□□□□ -2.36
KRTAP3-1Q9BYR8 MIR29B1-201ENST00000385015 81 ntBASIC0.34□□□□□ -2.36
KRTAP3-1Q9BYR8 MIR124-2-201ENST00000385081 109 ntBASIC0.34□□□□□ -2.36
KRTAP3-1Q9BYR8 MIR4743-201ENST00000584576 69 ntBASIC0.34□□□□□ -2.36
KRTAP3-1Q9BYR8 RNU6-974P-201ENST00000384099 108 ntBASIC0.33□□□□□ -2.36
KRTAP3-1Q9BYR8 MIR548H2-201ENST00000408874 88 ntBASIC0.33□□□□□ -2.36
KRTAP3-1Q9BYR8 MIR4315-1-201ENST00000636800 73 ntBASIC0.33□□□□□ -2.36
KRTAP3-1Q9BYR8 MIR4315-2-201ENST00000640925 73 ntBASIC0.33□□□□□ -2.36
KRTAP3-1Q9BYR8 RNU6-392P-201ENST00000364926 101 ntBASIC0.32□□□□□ -2.36
KRTAP3-1Q9BYR8 SNORD56B-201ENST00000384713 71 ntBASIC0.32□□□□□ -2.36
KRTAP3-1Q9BYR8 RNU6-530P-201ENST00000391180 107 ntBASIC0.32□□□□□ -2.36
KRTAP3-1Q9BYR8 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.32□□□□□ -2.36
KRTAP3-1Q9BYR8 RNU7-159P-201ENST00000459284 62 ntBASIC0.32□□□□□ -2.36
KRTAP3-1Q9BYR8 RNA5SP102-201ENST00000516865 106 ntBASIC0.32□□□□□ -2.36
KRTAP3-1Q9BYR8 MIR8068-201ENST00000618032 68 ntBASIC0.32□□□□□ -2.36
KRTAP3-1Q9BYR8 MIR96-201ENST00000362288 78 ntBASIC0.31□□□□□ -2.36
KRTAP3-1Q9BYR8 SNORA42.1-201ENST00000363515 137 ntBASIC0.31□□□□□ -2.36
KRTAP3-1Q9BYR8 RNU6-742P-201ENST00000365289 107 ntBASIC0.31□□□□□ -2.36
KRTAP3-1Q9BYR8 MIR593-201ENST00000384856 100 ntBASIC0.31□□□□□ -2.36
KRTAP3-1Q9BYR8 RNU6-1250P-201ENST00000391218 107 ntBASIC0.31□□□□□ -2.36
KRTAP3-1Q9BYR8 RNU6-721P-201ENST00000410155 105 ntBASIC0.31□□□□□ -2.36
KRTAP3-1Q9BYR8 MIR1468-201ENST00000410600 86 ntBASIC0.31□□□□□ -2.36
KRTAP3-1Q9BYR8 AC244250.2-201ENST00000418731 148 ntBASIC0.31□□□□□ -2.36
KRTAP3-1Q9BYR8 RNU6-1223P-201ENST00000517124 104 ntBASIC0.31□□□□□ -2.36
KRTAP3-1Q9BYR8 MIR6835-201ENST00000621552 64 ntBASIC0.31□□□□□ -2.36
KRTAP3-1Q9BYR8 RNU6-822P-201ENST00000362707 106 ntBASIC0.3□□□□□ -2.36
KRTAP3-1Q9BYR8 Y_RNA.699-201ENST00000516803 93 ntBASIC0.3□□□□□ -2.36
KRTAP3-1Q9BYR8 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
KRTAP3-1Q9BYR8 MIR92A1-201ENST00000385233 78 ntBASIC0.29□□□□□ -2.36
KRTAP3-1Q9BYR8 MIR151B-201ENST00000584249 96 ntBASIC0.29□□□□□ -2.36
KRTAP3-1Q9BYR8 RNA5SP499-201ENST00000363982 119 ntBASIC0.28□□□□□ -2.36
KRTAP3-1Q9BYR8 MIR508-201ENST00000384857 115 ntBASIC0.28□□□□□ -2.36
KRTAP3-1Q9BYR8 AL445193.1-201ENST00000441183 141 ntBASIC0.28□□□□□ -2.36
KRTAP3-1Q9BYR8 RNU7-165P-201ENST00000458864 60 ntBASIC0.28□□□□□ -2.36
KRTAP3-1Q9BYR8 TRMT112P2-201ENST00000512910 132 ntBASIC0.28□□□□□ -2.36
KRTAP3-1Q9BYR8 snoU13.31-201ENST00000607291 104 ntBASIC0.28□□□□□ -2.36
KRTAP3-1Q9BYR8 SNORA27.2-201ENST00000363365 126 ntBASIC0.27□□□□□ -2.37
KRTAP3-1Q9BYR8 MIR145-201ENST00000384967 88 ntBASIC0.27□□□□□ -2.37
KRTAP3-1Q9BYR8 AC114755.3-201ENST00000481111 251 ntBASIC0.27□□□□□ -2.37
KRTAP3-1Q9BYR8 RNU1-93P-201ENST00000364704 169 ntBASIC0.26□□□□□ -2.37
KRTAP3-1Q9BYR8 SNORD19-201ENST00000391191 68 ntBASIC0.25□□□□□ -2.37
KRTAP3-1Q9BYR8 RNU6-46P-201ENST00000383860 107 ntBASIC0.24□□□□□ -2.37
KRTAP3-1Q9BYR8 MIR520D-201ENST00000385002 87 ntBASIC0.24□□□□□ -2.37
KRTAP3-1Q9BYR8 RNU6-724P-201ENST00000390958 105 ntBASIC0.24□□□□□ -2.37
KRTAP3-1Q9BYR8 CYP3A137P-201ENST00000562436 69 ntBASIC0.24□□□□□ -2.37
KRTAP3-1Q9BYR8 RNU6-258P-201ENST00000390884 101 ntBASIC0.23□□□□□ -2.37
KRTAP3-1Q9BYR8 AL353691.2-201ENST00000443795 59 ntBASIC0.23□□□□□ -2.37
KRTAP3-1Q9BYR8 SNORD18.2-201ENST00000459604 70 ntBASIC0.23□□□□□ -2.37
KRTAP3-1Q9BYR8 RNA5SP169-201ENST00000517268 117 ntBASIC0.23□□□□□ -2.37
KRTAP3-1Q9BYR8 SNORD114-5-201ENST00000362928 70 ntBASIC0.22□□□□□ -2.37
KRTAP3-1Q9BYR8 RNA5SP214-201ENST00000363378 118 ntBASIC0.22□□□□□ -2.37
KRTAP3-1Q9BYR8 SNORD49B-201ENST00000365172 72 ntBASIC0.22□□□□□ -2.37
KRTAP3-1Q9BYR8 SNORA26.4-201ENST00000391188 123 ntBASIC0.22□□□□□ -2.37
KRTAP3-1Q9BYR8 RNA5SP134-201ENST00000516492 96 ntBASIC0.22□□□□□ -2.37
KRTAP3-1Q9BYR8 MIR6851-201ENST00000617060 67 ntBASIC0.22□□□□□ -2.37
KRTAP3-1Q9BYR8 MIR4426-201ENST00000640330 63 ntBASIC0.22□□□□□ -2.37
KRTAP3-1Q9BYR8 MIR655-201ENST00000362159 97 ntBASIC0.21□□□□□ -2.38
KRTAP3-1Q9BYR8 SNORD114-26-201ENST00000363543 72 ntBASIC0.21□□□□□ -2.38
KRTAP3-1Q9BYR8 SNORD74.6-201ENST00000364796 70 ntBASIC0.21□□□□□ -2.38
KRTAP3-1Q9BYR8 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
KRTAP3-1Q9BYR8 RNU6-321P-201ENST00000410912 106 ntBASIC0.21□□□□□ -2.38
KRTAP3-1Q9BYR8 RNU6ATAC14P-201ENST00000516218 91 ntBASIC0.21□□□□□ -2.38
KRTAP3-1Q9BYR8 MIR4498-201ENST00000577599 66 ntBASIC0.21□□□□□ -2.38
KRTAP3-1Q9BYR8 MIR4714-201ENST00000580728 77 ntBASIC0.21□□□□□ -2.38
KRTAP3-1Q9BYR8 MIR4280-201ENST00000582178 76 ntBASIC0.21□□□□□ -2.38
KRTAP3-1Q9BYR8 MIR5683-201ENST00000636514 76 ntBASIC0.21□□□□□ -2.38
KRTAP3-1Q9BYR8 MIR4317-201ENST00000637586 65 ntBASIC0.21□□□□□ -2.38
KRTAP3-1Q9BYR8 MIR23A-201ENST00000385245 73 ntBASIC0.2□□□□□ -2.38
KRTAP3-1Q9BYR8 RNA5SP458-201ENST00000516188 119 ntBASIC0.2□□□□□ -2.38
KRTAP3-1Q9BYR8 U6.103-201ENST00000637085 61 ntBASIC0.2□□□□□ -2.38
KRTAP3-1Q9BYR8 RNU6-1008P-201ENST00000384160 104 ntBASIC0.19□□□□□ -2.38
KRTAP3-1Q9BYR8 MIR548H4-201ENST00000408689 111 ntBASIC0.19□□□□□ -2.38
KRTAP3-1Q9BYR8 AC114737.2-201ENST00000421583 173 ntBASIC0.19□□□□□ -2.38
KRTAP3-1Q9BYR8 SNORD38.3-201ENST00000516599 73 ntBASIC0.19□□□□□ -2.38
KRTAP3-1Q9BYR8 RNA5SP66-201ENST00000517178 101 ntBASIC0.19□□□□□ -2.38
KRTAP3-1Q9BYR8 SNORD115-33-201ENST00000363723 82 ntBASIC0.18□□□□□ -2.38
KRTAP3-1Q9BYR8 SNORD114-9-201ENST00000364370 72 ntBASIC0.18□□□□□ -2.38
KRTAP3-1Q9BYR8 AC104692.1-201ENST00000472406 90 ntBASIC0.18□□□□□ -2.38
KRTAP3-1Q9BYR8 RNY1P9-201ENST00000532431 109 ntBASIC0.18□□□□□ -2.38
KRTAP3-1Q9BYR8 RNU6-929P-201ENST00000384429 107 ntBASIC0.17□□□□□ -2.38
KRTAP3-1Q9BYR8 RNU6-59P-201ENST00000384787 107 ntBASIC0.17□□□□□ -2.38
KRTAP3-1Q9BYR8 MIR4263-201ENST00000584745 83 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 174.7 ms