Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 MIR409-201ENST00000362237 79 ntBASIC-0.6□□□□□ -2.51
LYSMD4Q5XG99 RNU6-315P-201ENST00000362666 107 ntBASIC-0.6□□□□□ -2.51
LYSMD4Q5XG99 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.6□□□□□ -2.51
LYSMD4Q5XG99 MIR548AG1-201ENST00000579932 66 ntBASIC-0.6□□□□□ -2.51
LYSMD4Q5XG99 MIR4712-201ENST00000583750 82 ntBASIC-0.6□□□□□ -2.51
LYSMD4Q5XG99 U2.7-201ENST00000619197 100 ntBASIC-0.6□□□□□ -2.51
LYSMD4Q5XG99 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.61□□□□□ -2.51
LYSMD4Q5XG99 RNU6-242P-201ENST00000384359 107 ntBASIC-0.61□□□□□ -2.51
LYSMD4Q5XG99 MIR3179-1-201ENST00000578940 84 ntBASIC-0.61□□□□□ -2.51
LYSMD4Q5XG99 MIR3179-2-201ENST00000579107 84 ntBASIC-0.61□□□□□ -2.51
LYSMD4Q5XG99 MIR3179-3-201ENST00000579566 84 ntBASIC-0.61□□□□□ -2.51
LYSMD4Q5XG99 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.61□□□□□ -2.51
LYSMD4Q5XG99 MIR3179-4-201ENST00000617599 84 ntBASIC-0.61□□□□□ -2.51
LYSMD4Q5XG99 MIR1245B-201ENST00000636115 69 ntBASIC-0.61□□□□□ -2.51
LYSMD4Q5XG99 SNORD73B-201ENST00000364394 72 ntBASIC-0.62□□□□□ -2.51
LYSMD4Q5XG99 RNA5SP331-201ENST00000364986 107 ntBASIC-0.62□□□□□ -2.51
LYSMD4Q5XG99 MIR548C-201ENST00000384815 97 ntBASIC-0.62□□□□□ -2.51
LYSMD4Q5XG99 RNA5SP470-201ENST00000516463 106 ntBASIC-0.62□□□□□ -2.51
LYSMD4Q5XG99 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.62□□□□□ -2.51
LYSMD4Q5XG99 RNU6-807P-201ENST00000516805 107 ntBASIC-0.62□□□□□ -2.51
LYSMD4Q5XG99 AL445584.3-201ENST00000617173 78 ntBASIC-0.62□□□□□ -2.51
LYSMD4Q5XG99 MIR1297-201ENST00000637311 77 ntBASIC-0.62□□□□□ -2.51
LYSMD4Q5XG99 SNORA62.4-201ENST00000365504 151 ntBASIC-0.63□□□□□ -2.51
LYSMD4Q5XG99 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.63□□□□□ -2.51
LYSMD4Q5XG99 AP000533.3-201ENST00000447704 118 ntBASIC-0.63□□□□□ -2.51
LYSMD4Q5XG99 SNORD115-22-201ENST00000364456 82 ntBASIC-0.64□□□□□ -2.51
LYSMD4Q5XG99 RNU6-380P-201ENST00000410207 107 ntBASIC-0.64□□□□□ -2.51
LYSMD4Q5XG99 MIR4666B-201ENST00000578142 81 ntBASIC-0.64□□□□□ -2.51
LYSMD4Q5XG99 MIR548AX-201ENST00000580117 73 ntBASIC-0.64□□□□□ -2.51
LYSMD4Q5XG99 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.64□□□□□ -2.51
LYSMD4Q5XG99 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.65□□□□□ -2.51
LYSMD4Q5XG99 RNU6-1255P-201ENST00000363434 112 ntBASIC-0.65□□□□□ -2.51
LYSMD4Q5XG99 RNU6-820P-201ENST00000384273 107 ntBASIC-0.65□□□□□ -2.51
LYSMD4Q5XG99 MIR517B-201ENST00000385102 67 ntBASIC-0.65□□□□□ -2.51
LYSMD4Q5XG99 SNORD57-201ENST00000448188 72 ntBASIC-0.65□□□□□ -2.51
LYSMD4Q5XG99 SNORD18.2-201ENST00000459604 70 ntBASIC-0.65□□□□□ -2.51
LYSMD4Q5XG99 SNORD114-14-201ENST00000362723 75 ntBASIC-0.66□□□□□ -2.52
LYSMD4Q5XG99 SNORD45A-201ENST00000384512 84 ntBASIC-0.66□□□□□ -2.52
LYSMD4Q5XG99 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.66□□□□□ -2.52
LYSMD4Q5XG99 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.66□□□□□ -2.52
LYSMD4Q5XG99 RNU6-573P-201ENST00000383938 106 ntBASIC-0.67□□□□□ -2.52
LYSMD4Q5XG99 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.67□□□□□ -2.52
LYSMD4Q5XG99 AL021921.1-201ENST00000442774 93 ntBASIC-0.67□□□□□ -2.52
LYSMD4Q5XG99 AC021146.6-201ENST00000514659 117 ntBASIC-0.67□□□□□ -2.52
LYSMD4Q5XG99 RNU7-154P-201ENST00000516194 62 ntBASIC-0.67□□□□□ -2.52
LYSMD4Q5XG99 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.67□□□□□ -2.52
LYSMD4Q5XG99 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.68□□□□□ -2.52
LYSMD4Q5XG99 SNORD74.6-201ENST00000364796 70 ntBASIC-0.68□□□□□ -2.52
LYSMD4Q5XG99 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.68□□□□□ -2.52
LYSMD4Q5XG99 MT-TQ-201ENST00000387372 72 ntBASIC-0.68□□□□□ -2.52
LYSMD4Q5XG99 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.68□□□□□ -2.52
LYSMD4Q5XG99 Y_RNA.388-201ENST00000383919 113 ntBASIC-0.69□□□□□ -2.52
LYSMD4Q5XG99 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.69□□□□□ -2.52
LYSMD4Q5XG99 SNORA13-201ENST00000458790 133 ntBASIC-0.69□□□□□ -2.52
LYSMD4Q5XG99 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.69□□□□□ -2.52
LYSMD4Q5XG99 SNORD113.1-201ENST00000363280 73 ntBASIC-0.7□□□□□ -2.52
LYSMD4Q5XG99 RNU6-70P-201ENST00000516438 60 ntBASIC-0.7□□□□□ -2.52
LYSMD4Q5XG99 RNA5SP173-201ENST00000364857 136 ntBASIC-0.71□□□□□ -2.52
LYSMD4Q5XG99 RNY4P29-201ENST00000410801 97 ntBASIC-0.71□□□□□ -2.52
LYSMD4Q5XG99 MIR3134-201ENST00000579433 74 ntBASIC-0.71□□□□□ -2.52
LYSMD4Q5XG99 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.72□□□□□ -2.52
LYSMD4Q5XG99 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.72□□□□□ -2.52
LYSMD4Q5XG99 RNU7-174P-201ENST00000516248 59 ntBASIC-0.72□□□□□ -2.52
LYSMD4Q5XG99 Y_RNA.43-201ENST00000362670 111 ntBASIC-0.73□□□□□ -2.53
LYSMD4Q5XG99 RNA5SP266-201ENST00000410273 108 ntBASIC-0.73□□□□□ -2.53
LYSMD4Q5XG99 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.74□□□□□ -2.53
LYSMD4Q5XG99 SNORD114-17-201ENST00000364699 75 ntBASIC-0.74□□□□□ -2.53
LYSMD4Q5XG99 SNORA26.2-201ENST00000390922 122 ntBASIC-0.74□□□□□ -2.53
LYSMD4Q5XG99 RNY1P9-201ENST00000532431 109 ntBASIC-0.74□□□□□ -2.53
LYSMD4Q5XG99 MIR548V-201ENST00000584165 80 ntBASIC-0.74□□□□□ -2.53
LYSMD4Q5XG99 MIR8053-201ENST00000613344 75 ntBASIC-0.75□□□□□ -2.53
LYSMD4Q5XG99 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.76□□□□□ -2.53
LYSMD4Q5XG99 SNORD115-31-201ENST00000365318 82 ntBASIC-0.76□□□□□ -2.53
LYSMD4Q5XG99 RNU6-246P-201ENST00000384702 107 ntBASIC-0.76□□□□□ -2.53
LYSMD4Q5XG99 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.76□□□□□ -2.53
LYSMD4Q5XG99 SCARNA17-201ENST00000516183 144 ntBASIC-0.76□□□□□ -2.53
LYSMD4Q5XG99 RNU6-924P-201ENST00000362926 108 ntBASIC-0.77□□□□□ -2.53
LYSMD4Q5XG99 RNU6-668P-201ENST00000364180 107 ntBASIC-0.77□□□□□ -2.53
LYSMD4Q5XG99 MIR154-201ENST00000385243 84 ntBASIC-0.77□□□□□ -2.53
LYSMD4Q5XG99 MTND4LP1-201ENST00000446263 157 ntBASIC-0.77□□□□□ -2.53
LYSMD4Q5XG99 RNU7-88P-201ENST00000458752 63 ntBASIC-0.77□□□□□ -2.53
LYSMD4Q5XG99 U4.4-201ENST00000620626 117 ntBASIC-0.77□□□□□ -2.53
LYSMD4Q5XG99 RNU6-228P-201ENST00000362700 106 ntBASIC-0.78□□□□□ -2.53
LYSMD4Q5XG99 SNORD114-25-201ENST00000363742 72 ntBASIC-0.78□□□□□ -2.53
LYSMD4Q5XG99 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.78□□□□□ -2.53
LYSMD4Q5XG99 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.78□□□□□ -2.53
LYSMD4Q5XG99 MIR630-201ENST00000384957 97 ntBASIC-0.78□□□□□ -2.53
LYSMD4Q5XG99 MIR196A1-201ENST00000388006 70 ntBASIC-0.78□□□□□ -2.53
LYSMD4Q5XG99 MIR4324-201ENST00000584846 72 ntBASIC-0.78□□□□□ -2.53
LYSMD4Q5XG99 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.78□□□□□ -2.53
LYSMD4Q5XG99 MIR6738-201ENST00000619620 64 ntBASIC-0.78□□□□□ -2.53
LYSMD4Q5XG99 MIR4679-1-201ENST00000637619 75 ntBASIC-0.78□□□□□ -2.53
LYSMD4Q5XG99 MIR1255A-201ENST00000408338 113 ntBASIC-0.79□□□□□ -2.54
LYSMD4Q5XG99 U7.5-201ENST00000517224 61 ntBASIC-0.79□□□□□ -2.54
LYSMD4Q5XG99 RNU6-587P-201ENST00000391282 106 ntBASIC-0.8□□□□□ -2.54
LYSMD4Q5XG99 RNU6-687P-201ENST00000516443 89 ntBASIC-0.8□□□□□ -2.54
LYSMD4Q5XG99 RNU6-431P-201ENST00000383874 107 ntBASIC-0.81□□□□□ -2.54
LYSMD4Q5XG99 RNU6-10P-201ENST00000384036 107 ntBASIC-0.81□□□□□ -2.54
LYSMD4Q5XG99 SNORD116-24-201ENST00000384549 92 ntBASIC-0.81□□□□□ -2.54
LYSMD4Q5XG99 RNU6-698P-201ENST00000363523 107 ntBASIC-0.82□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 8991 ms