Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 Y_RNA.193-201ENST00000363979 102 ntBASIC-2.71□□□□□ -2.84
CCL20P78556 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-2.71□□□□□ -2.84
CCL20P78556 RNU6-604P-201ENST00000390917 100 ntBASIC-2.71□□□□□ -2.84
CCL20P78556 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.71□□□□□ -2.84
CCL20P78556 RNU6-982P-201ENST00000516216 102 ntBASIC-2.71□□□□□ -2.84
CCL20P78556 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.71□□□□□ -2.84
CCL20P78556 Y_RNA.712-201ENST00000517011 92 ntBASIC-2.71□□□□□ -2.84
CCL20P78556 U7.3-201ENST00000616123 62 ntBASIC-2.71□□□□□ -2.84
CCL20P78556 SNORD115-37-201ENST00000363768 82 ntBASIC-2.72□□□□□ -2.84
CCL20P78556 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.72□□□□□ -2.84
CCL20P78556 AC004792.1-201ENST00000614523 137 ntBASIC-2.72□□□□□ -2.84
CCL20P78556 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.72□□□□□ -2.84
CCL20P78556 Y_RNA.107-201ENST00000363190 121 ntBASIC-2.73□□□□□ -2.85
CCL20P78556 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.73□□□□□ -2.85
CCL20P78556 RNU6-980P-201ENST00000516925 103 ntBASIC-2.73□□□□□ -2.85
CCL20P78556 MTND5P41-201ENST00000517498 206 ntBASIC-2.73□□□□□ -2.85
CCL20P78556 MIR548V-201ENST00000584165 80 ntBASIC-2.73□□□□□ -2.85
CCL20P78556 U4.2-201ENST00000618561 85 ntBASIC-2.73□□□□□ -2.85
CCL20P78556 RNU6-330P-201ENST00000363015 107 ntBASIC-2.74□□□□□ -2.85
CCL20P78556 SNORA8.1-201ENST00000384250 140 ntBASIC-2.74□□□□□ -2.85
CCL20P78556 RNU6-880P-201ENST00000384526 107 ntBASIC-2.74□□□□□ -2.85
CCL20P78556 MIR590-201ENST00000385008 97 ntBASIC-2.75□□□□□ -2.85
CCL20P78556 RNU6-257P-201ENST00000410238 98 ntBASIC-2.75□□□□□ -2.85
CCL20P78556 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.75□□□□□ -2.85
CCL20P78556 RNU6-766P-201ENST00000362478 107 ntBASIC-2.77□□□□□ -2.85
CCL20P78556 Y_RNA.812-201ENST00000610788 101 ntBASIC-2.77□□□□□ -2.85
CCL20P78556 Y_RNA.784-201ENST00000613803 101 ntBASIC-2.77□□□□□ -2.85
CCL20P78556 Y_RNA.787-201ENST00000616522 101 ntBASIC-2.77□□□□□ -2.85
CCL20P78556 Y_RNA.780-201ENST00000617336 101 ntBASIC-2.77□□□□□ -2.85
CCL20P78556 Y_RNA.801-201ENST00000619005 101 ntBASIC-2.77□□□□□ -2.85
CCL20P78556 RNU6-797P-201ENST00000363101 109 ntBASIC-2.78□□□□□ -2.85
CCL20P78556 SNORD45.1-201ENST00000363181 77 ntBASIC-2.78□□□□□ -2.85
CCL20P78556 MIR630-201ENST00000384957 97 ntBASIC-2.78□□□□□ -2.85
CCL20P78556 RNU6-971P-201ENST00000516920 106 ntBASIC-2.78□□□□□ -2.85
CCL20P78556 RNU6-303P-201ENST00000517091 106 ntBASIC-2.78□□□□□ -2.85
CCL20P78556 RNY4P27-201ENST00000363341 96 ntBASIC-2.79□□□□□ -2.86
CCL20P78556 SNORA63-201ENST00000363450 132 ntBASIC-2.79□□□□□ -2.86
CCL20P78556 SNORD116-16-201ENST00000384533 92 ntBASIC-2.79□□□□□ -2.86
CCL20P78556 RNU4-88P-201ENST00000411220 86 ntBASIC-2.79□□□□□ -2.86
CCL20P78556 Y_RNA.93-201ENST00000363066 109 ntBASIC-2.8□□□□□ -2.86
CCL20P78556 RNU6-624P-201ENST00000363411 107 ntBASIC-2.8□□□□□ -2.86
CCL20P78556 RNU6-867P-201ENST00000364956 107 ntBASIC-2.8□□□□□ -2.86
CCL20P78556 Y_RNA.343-201ENST00000365354 112 ntBASIC-2.8□□□□□ -2.86
CCL20P78556 SNORD116-21-201ENST00000384507 92 ntBASIC-2.8□□□□□ -2.86
CCL20P78556 MIR1302-5-201ENST00000408164 150 ntBASIC-2.8□□□□□ -2.86
CCL20P78556 MIR4503-201ENST00000582187 83 ntBASIC-2.8□□□□□ -2.86
CCL20P78556 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.81□□□□□ -2.86
CCL20P78556 SNORD113-2-201ENST00000391082 72 ntBASIC-2.81□□□□□ -2.86
CCL20P78556 RNU6-995P-201ENST00000391244 107 ntBASIC-2.81□□□□□ -2.86
CCL20P78556 MTND4LP1-201ENST00000446263 157 ntBASIC-2.81□□□□□ -2.86
CCL20P78556 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.81□□□□□ -2.86
CCL20P78556 MTATP8P2-201ENST00000435212 202 ntBASIC-2.82□□□□□ -2.86
CCL20P78556 RNU6-182P-201ENST00000516970 105 ntBASIC-2.82□□□□□ -2.86
CCL20P78556 AL353621.2-201ENST00000605340 133 ntBASIC-2.82□□□□□ -2.86
CCL20P78556 AC013734.1-201ENST00000619329 111 ntBASIC-2.83□□□□□ -2.86
CCL20P78556 RNU6-633P-201ENST00000362612 103 ntBASIC-2.84□□□□□ -2.86
CCL20P78556 SNORA27.2-201ENST00000363365 126 ntBASIC-2.84□□□□□ -2.86
CCL20P78556 RNU6-196P-201ENST00000384315 107 ntBASIC-2.84□□□□□ -2.86
CCL20P78556 AC093729.1-201ENST00000513074 128 ntBASIC-2.84□□□□□ -2.86
CCL20P78556 RNU6-109P-201ENST00000516364 107 ntBASIC-2.84□□□□□ -2.86
CCL20P78556 RNU6-659P-201ENST00000516454 104 ntBASIC-2.84□□□□□ -2.86
CCL20P78556 RNU6-184P-201ENST00000516514 107 ntBASIC-2.84□□□□□ -2.86
CCL20P78556 AL627230.5-201ENST00000619807 58 ntBASIC-2.84□□□□□ -2.86
CCL20P78556 SNORD1B-201ENST00000363091 84 ntBASIC-2.85□□□□□ -2.87
CCL20P78556 RNA5SP215-201ENST00000363440 122 ntBASIC-2.85□□□□□ -2.87
CCL20P78556 Y_RNA.818-201ENST00000618813 71 ntBASIC-2.85□□□□□ -2.87
CCL20P78556 U6.97-201ENST00000636904 101 ntBASIC-2.85□□□□□ -2.87
CCL20P78556 RNA5SP173-201ENST00000364857 136 ntBASIC-2.86□□□□□ -2.87
CCL20P78556 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.86□□□□□ -2.87
CCL20P78556 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.86□□□□□ -2.87
CCL20P78556 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-2.86□□□□□ -2.87
CCL20P78556 RNU6-194P-201ENST00000363862 105 ntBASIC-2.87□□□□□ -2.87
CCL20P78556 AC074348.1-201ENST00000426503 132 ntBASIC-2.87□□□□□ -2.87
CCL20P78556 SNORD63.2-201ENST00000516303 64 ntBASIC-2.87□□□□□ -2.87
CCL20P78556 RNU6-557P-201ENST00000516842 110 ntBASIC-2.87□□□□□ -2.87
CCL20P78556 RNU6-668P-201ENST00000364180 107 ntBASIC-2.88□□□□□ -2.87
CCL20P78556 RNU6-119P-201ENST00000364882 107 ntBASIC-2.88□□□□□ -2.87
CCL20P78556 MIR4668-201ENST00000582284 70 ntBASIC-2.88□□□□□ -2.87
CCL20P78556 AC005520.4-201ENST00000604337 90 ntBASIC-2.88□□□□□ -2.87
CCL20P78556 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.89□□□□□ -2.87
CCL20P78556 Y_RNA.290-201ENST00000364879 114 ntBASIC-2.89□□□□□ -2.87
CCL20P78556 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-2.89□□□□□ -2.87
CCL20P78556 RNU7-151P-201ENST00000516930 53 ntBASIC-2.89□□□□□ -2.87
CCL20P78556 RNU6-379P-201ENST00000363813 104 ntBASIC-2.9□□□□□ -2.87
CCL20P78556 RNU6-686P-201ENST00000364839 107 ntBASIC-2.9□□□□□ -2.87
CCL20P78556 RNU6-669P-201ENST00000365575 107 ntBASIC-2.9□□□□□ -2.87
CCL20P78556 SNORA41B-201ENST00000384785 128 ntBASIC-2.9□□□□□ -2.87
CCL20P78556 RNY4P18-201ENST00000391107 89 ntBASIC-2.9□□□□□ -2.87
CCL20P78556 RNU6-327P-201ENST00000516270 127 ntBASIC-2.9□□□□□ -2.87
CCL20P78556 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.9□□□□□ -2.87
CCL20P78556 RNA5SP405-201ENST00000363059 114 ntBASIC-2.91□□□□□ -2.88
CCL20P78556 RNU7-200P-201ENST00000516105 62 ntBASIC-2.91□□□□□ -2.88
CCL20P78556 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.91□□□□□ -2.88
CCL20P78556 snoU13.10-201ENST00000459301 103 ntBASIC-2.92□□□□□ -2.88
CCL20P78556 RNU6-388P-201ENST00000517012 105 ntBASIC-2.92□□□□□ -2.88
CCL20P78556 RNU6-389P-201ENST00000517048 105 ntBASIC-2.92□□□□□ -2.88
CCL20P78556 Y_RNA.218-201ENST00000364218 104 ntBASIC-2.93□□□□□ -2.88
CCL20P78556 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.93□□□□□ -2.88
CCL20P78556 MIR579-201ENST00000385221 98 ntBASIC-2.93□□□□□ -2.88
CCL20P78556 Y_RNA.604-201ENST00000410574 102 ntBASIC-2.93□□□□□ -2.88
Retrieved 100 of 98,524 protein–RNA pairs in 222.5 ms