Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RNU6-980P-201ENST00000516925 103 ntBASIC0.55□□□□□ -2.32
USP11P51784 Y_RNA.30-201ENST00000362572 97 ntBASIC0.54□□□□□ -2.32
USP11P51784 RNA5SP98-201ENST00000363158 137 ntBASIC0.54□□□□□ -2.32
USP11P51784 RNU6-598P-201ENST00000364017 105 ntBASIC0.54□□□□□ -2.32
USP11P51784 SNORA40B-201ENST00000385573 128 ntBASIC0.54□□□□□ -2.32
USP11P51784 AC108740.1-201ENST00000498629 225 ntBASIC0.54□□□□□ -2.32
USP11P51784 RNA5SP457-201ENST00000363657 124 ntBASIC0.53□□□□□ -2.32
USP11P51784 MIR643-201ENST00000385267 97 ntBASIC0.53□□□□□ -2.32
USP11P51784 MIR4464-201ENST00000580818 92 ntBASIC0.53□□□□□ -2.32
USP11P51784 RNA5SP62-201ENST00000363457 110 ntBASIC0.52□□□□□ -2.33
USP11P51784 AC114737.2-201ENST00000421583 173 ntBASIC0.52□□□□□ -2.33
USP11P51784 RNA5SP330-201ENST00000517096 96 ntBASIC0.52□□□□□ -2.33
USP11P51784 MIR4432-201ENST00000581823 84 ntBASIC0.52□□□□□ -2.33
USP11P51784 Y_RNA.115-201ENST00000363272 98 ntBASIC0.51□□□□□ -2.33
USP11P51784 Y_RNA.374-201ENST00000365606 101 ntBASIC0.51□□□□□ -2.33
USP11P51784 RNU7-55P-201ENST00000459426 62 ntBASIC0.51□□□□□ -2.33
USP11P51784 AC069113.3-201ENST00000521019 150 ntBASIC0.51□□□□□ -2.33
USP11P51784 MIR4490-201ENST00000582647 84 ntBASIC0.51□□□□□ -2.33
USP11P51784 AC108676.2-201ENST00000605225 163 ntBASIC0.51□□□□□ -2.33
USP11P51784 MIR6888-201ENST00000621977 67 ntBASIC0.51□□□□□ -2.33
USP11P51784 U2.18-201ENST00000622185 84 ntBASIC0.51□□□□□ -2.33
USP11P51784 MIR8087-201ENST00000612745 78 ntBASIC0.5□□□□□ -2.33
USP11P51784 uc_338.36-201ENST00000622331 158 ntBASIC0.5□□□□□ -2.33
USP11P51784 MIR429-201ENST00000362106 83 ntBASIC0.49□□□□□ -2.33
USP11P51784 MIR330-201ENST00000362196 94 ntBASIC0.49□□□□□ -2.33
USP11P51784 RNU4-88P-201ENST00000411220 86 ntBASIC0.49□□□□□ -2.33
USP11P51784 MIR6514-201ENST00000622549 70 ntBASIC0.49□□□□□ -2.33
USP11P51784 RNU6-753P-201ENST00000363926 107 ntBASIC0.48□□□□□ -2.33
USP11P51784 Y_RNA.379-201ENST00000365653 102 ntBASIC0.48□□□□□ -2.33
USP11P51784 MIR6507-201ENST00000613630 70 ntBASIC0.48□□□□□ -2.33
USP11P51784 snoR1.1-201ENST00000628177 80 ntBASIC0.48□□□□□ -2.33
USP11P51784 SNORA50A-201ENST00000384225 134 ntBASIC0.47□□□□□ -2.33
USP11P51784 MIR579-201ENST00000385221 98 ntBASIC0.47□□□□□ -2.33
USP11P51784 MIR548X-201ENST00000580069 75 ntBASIC0.47□□□□□ -2.33
USP11P51784 AL391099.1-201ENST00000624635 187 ntBASIC0.47□□□□□ -2.33
USP11P51784 VTRNA1-3-201ENST00000365645 89 ntBASIC0.46□□□□□ -2.34
USP11P51784 RNU6-180P-201ENST00000516697 61 ntBASIC0.46□□□□□ -2.34
USP11P51784 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC0.46□□□□□ -2.34
USP11P51784 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.46□□□□□ -2.34
USP11P51784 AL445584.3-201ENST00000617173 78 ntBASIC0.46□□□□□ -2.34
USP11P51784 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.46□□□□□ -2.34
USP11P51784 RNU4-33P-201ENST00000364316 85 ntBASIC0.45□□□□□ -2.34
USP11P51784 RNU6-973P-201ENST00000364690 107 ntBASIC0.45□□□□□ -2.34
USP11P51784 RNU6-1262P-201ENST00000516217 96 ntBASIC0.45□□□□□ -2.34
USP11P51784 RNU7-151P-201ENST00000516930 53 ntBASIC0.45□□□□□ -2.34
USP11P51784 CR383656.4-201ENST00000546909 122 ntBASIC0.45□□□□□ -2.34
USP11P51784 RNU6-900P-201ENST00000384498 102 ntBASIC0.44□□□□□ -2.34
USP11P51784 RNA5SP163-201ENST00000410304 99 ntBASIC0.44□□□□□ -2.34
USP11P51784 MIR1197-201ENST00000408818 88 ntBASIC0.43□□□□□ -2.34
USP11P51784 AC096531.1-201ENST00000419107 107 ntBASIC0.43□□□□□ -2.34
USP11P51784 U7.5-201ENST00000517224 61 ntBASIC0.43□□□□□ -2.34
USP11P51784 AC090625.1-201ENST00000357130 210 ntBASIC0.42□□□□□ -2.34
USP11P51784 RNU6-1327P-201ENST00000365302 105 ntBASIC0.42□□□□□ -2.34
USP11P51784 RNU6-35P-201ENST00000384530 107 ntBASIC0.42□□□□□ -2.34
USP11P51784 RNU6-455P-201ENST00000384681 107 ntBASIC0.42□□□□□ -2.34
USP11P51784 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.42□□□□□ -2.34
USP11P51784 RNU6-1133P-201ENST00000410963 100 ntBASIC0.41□□□□□ -2.34
USP11P51784 RNU7-88P-201ENST00000458752 63 ntBASIC0.41□□□□□ -2.34
USP11P51784 MIR5704-201ENST00000584029 77 ntBASIC0.41□□□□□ -2.34
USP11P51784 MIR8068-201ENST00000618032 68 ntBASIC0.41□□□□□ -2.34
USP11P51784 RNU6-696P-201ENST00000390834 107 ntBASIC0.4□□□□□ -2.35
USP11P51784 SNORA62.4-201ENST00000365504 151 ntBASIC0.39□□□□□ -2.35
USP11P51784 MIR148A-201ENST00000362215 68 ntBASIC0.38□□□□□ -2.35
USP11P51784 MIR593-201ENST00000384856 100 ntBASIC0.38□□□□□ -2.35
USP11P51784 RNU6-419P-201ENST00000517030 63 ntBASIC0.38□□□□□ -2.35
USP11P51784 MIR4315-1-201ENST00000636800 73 ntBASIC0.38□□□□□ -2.35
USP11P51784 MIR4315-2-201ENST00000640925 73 ntBASIC0.38□□□□□ -2.35
USP11P51784 Y_RNA.69-201ENST00000362885 109 ntBASIC0.37□□□□□ -2.35
USP11P51784 RNU6-1174P-201ENST00000517278 101 ntBASIC0.37□□□□□ -2.35
USP11P51784 RNU6-924P-201ENST00000362926 108 ntBASIC0.36□□□□□ -2.35
USP11P51784 RNA5SP257-201ENST00000363023 116 ntBASIC0.36□□□□□ -2.35
USP11P51784 MIR548AA1-201ENST00000384971 97 ntBASIC0.36□□□□□ -2.35
USP11P51784 RNU6-1267P-201ENST00000410747 107 ntBASIC0.36□□□□□ -2.35
USP11P51784 SNORD57-201ENST00000448188 72 ntBASIC0.36□□□□□ -2.35
USP11P51784 RNU7-160P-201ENST00000516660 62 ntBASIC0.36□□□□□ -2.35
USP11P51784 MIR4514-201ENST00000581410 57 ntBASIC0.36□□□□□ -2.35
USP11P51784 AC104408.1-201ENST00000605241 170 ntBASIC0.36□□□□□ -2.35
USP11P51784 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.36□□□□□ -2.35
USP11P51784 SNORD56B-201ENST00000384713 71 ntBASIC0.35□□□□□ -2.35
USP11P51784 MIR125B1-201ENST00000385236 88 ntBASIC0.35□□□□□ -2.35
USP11P51784 AC244250.2-201ENST00000418731 148 ntBASIC0.35□□□□□ -2.35
USP11P51784 RNA5SP134-201ENST00000516492 96 ntBASIC0.35□□□□□ -2.35
USP11P51784 SNORA62.5-201ENST00000516634 120 ntBASIC0.35□□□□□ -2.35
USP11P51784 MIR655-201ENST00000362159 97 ntBASIC0.34□□□□□ -2.36
USP11P51784 MIR145-201ENST00000384967 88 ntBASIC0.34□□□□□ -2.36
USP11P51784 MIR892B-201ENST00000401279 77 ntBASIC0.34□□□□□ -2.36
USP11P51784 RNU7-165P-201ENST00000458864 60 ntBASIC0.34□□□□□ -2.36
USP11P51784 RNU6-1206P-201ENST00000516339 103 ntBASIC0.34□□□□□ -2.36
USP11P51784 RNA5SP214-201ENST00000363378 118 ntBASIC0.32□□□□□ -2.36
USP11P51784 MIR610-201ENST00000385139 96 ntBASIC0.32□□□□□ -2.36
USP11P51784 AC114755.3-201ENST00000481111 251 ntBASIC0.32□□□□□ -2.36
USP11P51784 AC023932.2-201ENST00000603176 175 ntBASIC0.32□□□□□ -2.36
USP11P51784 MIR2909-201ENST00000617113 69 ntBASIC0.32□□□□□ -2.36
USP11P51784 Y_RNA.613-201ENST00000410726 97 ntBASIC0.31□□□□□ -2.36
USP11P51784 MIR4743-201ENST00000584576 69 ntBASIC0.31□□□□□ -2.36
USP11P51784 MIR6854-201ENST00000614935 69 ntBASIC0.31□□□□□ -2.36
USP11P51784 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.31□□□□□ -2.36
USP11P51784 SNORA42.1-201ENST00000363515 137 ntBASIC0.3□□□□□ -2.36
USP11P51784 Y_RNA.178-201ENST00000363832 102 ntBASIC0.3□□□□□ -2.36
USP11P51784 Y_RNA.68-201ENST00000362881 102 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms