Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.81□□□□□ -2.54
HMGCLP35914 U2.7-201ENST00000619197 100 ntBASIC-0.81□□□□□ -2.54
HMGCLP35914 MIR1297-201ENST00000637311 77 ntBASIC-0.81□□□□□ -2.54
HMGCLP35914 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.82□□□□□ -2.54
HMGCLP35914 MIR378F-201ENST00000578143 78 ntBASIC-0.82□□□□□ -2.54
HMGCLP35914 MIR147A-201ENST00000385079 72 ntBASIC-0.83□□□□□ -2.54
HMGCLP35914 RNA5SP266-201ENST00000410273 108 ntBASIC-0.83□□□□□ -2.54
HMGCLP35914 Y_RNA.694-201ENST00000516677 117 ntBASIC-0.83□□□□□ -2.54
HMGCLP35914 MIR5588-201ENST00000581890 63 ntBASIC-0.83□□□□□ -2.54
HMGCLP35914 MIR409-201ENST00000362237 79 ntBASIC-0.84□□□□□ -2.54
HMGCLP35914 RNU6-645P-201ENST00000364649 106 ntBASIC-0.84□□□□□ -2.54
HMGCLP35914 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.84□□□□□ -2.54
HMGCLP35914 MIR124-2-201ENST00000385081 109 ntBASIC-0.84□□□□□ -2.54
HMGCLP35914 MIR517B-201ENST00000385102 67 ntBASIC-0.84□□□□□ -2.54
HMGCLP35914 RNU7-171P-201ENST00000459581 62 ntBASIC-0.84□□□□□ -2.54
HMGCLP35914 RNA5SP461-201ENST00000516451 104 ntBASIC-0.84□□□□□ -2.54
HMGCLP35914 RNU6-807P-201ENST00000516805 107 ntBASIC-0.84□□□□□ -2.54
HMGCLP35914 MIR3115-201ENST00000577915 68 ntBASIC-0.84□□□□□ -2.54
HMGCLP35914 MIR4499-201ENST00000584834 69 ntBASIC-0.84□□□□□ -2.54
HMGCLP35914 SNORD114-25-201ENST00000363742 72 ntBASIC-0.85□□□□□ -2.55
HMGCLP35914 SNORA8.1-201ENST00000384250 140 ntBASIC-0.85□□□□□ -2.55
HMGCLP35914 MIR587-201ENST00000384845 96 ntBASIC-0.85□□□□□ -2.55
HMGCLP35914 RNU6-518P-201ENST00000516056 96 ntBASIC-0.85□□□□□ -2.55
HMGCLP35914 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.85□□□□□ -2.55
HMGCLP35914 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.86□□□□□ -2.55
HMGCLP35914 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.86□□□□□ -2.55
HMGCLP35914 SNORD18.2-201ENST00000459604 70 ntBASIC-0.86□□□□□ -2.55
HMGCLP35914 RNU6-924P-201ENST00000362926 108 ntBASIC-0.87□□□□□ -2.55
HMGCLP35914 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.87□□□□□ -2.55
HMGCLP35914 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.87□□□□□ -2.55
HMGCLP35914 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-0.87□□□□□ -2.55
HMGCLP35914 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.88□□□□□ -2.55
HMGCLP35914 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.88□□□□□ -2.55
HMGCLP35914 RNU6-431P-201ENST00000383874 107 ntBASIC-0.88□□□□□ -2.55
HMGCLP35914 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.88□□□□□ -2.55
HMGCLP35914 IGLL4P-201ENST00000614590 133 ntBASIC-0.88□□□□□ -2.55
HMGCLP35914 Y_RNA.81-201ENST00000362997 102 ntBASIC-0.89□□□□□ -2.55
HMGCLP35914 RNY1P1-201ENST00000364372 112 ntBASIC-0.89□□□□□ -2.55
HMGCLP35914 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.89□□□□□ -2.55
HMGCLP35914 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.89□□□□□ -2.55
HMGCLP35914 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.89□□□□□ -2.55
HMGCLP35914 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-0.89□□□□□ -2.55
HMGCLP35914 MIR548AG1-201ENST00000579932 66 ntBASIC-0.89□□□□□ -2.55
HMGCLP35914 uc_338.19-201ENST00000616808 99 ntBASIC-0.89□□□□□ -2.55
HMGCLP35914 RNU6-24P-201ENST00000384440 107 ntBASIC-0.9□□□□□ -2.55
HMGCLP35914 RNU6-604P-201ENST00000390917 100 ntBASIC-0.9□□□□□ -2.55
HMGCLP35914 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.9□□□□□ -2.55
HMGCLP35914 RNU7-174P-201ENST00000516248 59 ntBASIC-0.9□□□□□ -2.55
HMGCLP35914 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.9□□□□□ -2.55
HMGCLP35914 AL627230.5-201ENST00000619807 58 ntBASIC-0.9□□□□□ -2.55
HMGCLP35914 MIR4320-201ENST00000636981 65 ntBASIC-0.9□□□□□ -2.55
HMGCLP35914 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.91□□□□□ -2.56
HMGCLP35914 RNU6-380P-201ENST00000410207 107 ntBASIC-0.91□□□□□ -2.56
HMGCLP35914 RNA5SP192-201ENST00000364404 120 ntBASIC-0.92□□□□□ -2.56
HMGCLP35914 SNORD115-22-201ENST00000364456 82 ntBASIC-0.92□□□□□ -2.56
HMGCLP35914 SNORD45.1-201ENST00000363181 77 ntBASIC-0.93□□□□□ -2.56
HMGCLP35914 SNORD114-17-201ENST00000364699 75 ntBASIC-0.93□□□□□ -2.56
HMGCLP35914 Y_RNA.369-201ENST00000365568 117 ntBASIC-0.93□□□□□ -2.56
HMGCLP35914 RNU6-246P-201ENST00000384702 107 ntBASIC-0.93□□□□□ -2.56
HMGCLP35914 SNORA26.4-201ENST00000391188 123 ntBASIC-0.93□□□□□ -2.56
HMGCLP35914 RNU6-982P-201ENST00000516216 102 ntBASIC-0.93□□□□□ -2.56
HMGCLP35914 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.93□□□□□ -2.56
HMGCLP35914 SNORD115-33-201ENST00000363723 82 ntBASIC-0.94□□□□□ -2.56
HMGCLP35914 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.94□□□□□ -2.56
HMGCLP35914 SNORD64-201ENST00000386683 67 ntBASIC-0.94□□□□□ -2.56
HMGCLP35914 RNY4P30-201ENST00000410216 95 ntBASIC-0.94□□□□□ -2.56
HMGCLP35914 MIR4712-201ENST00000583750 82 ntBASIC-0.94□□□□□ -2.56
HMGCLP35914 MIR1245B-201ENST00000636115 69 ntBASIC-0.94□□□□□ -2.56
HMGCLP35914 MIR450A2-201ENST00000385022 100 ntBASIC-0.95□□□□□ -2.56
HMGCLP35914 SNX3P1X-201ENST00000414887 175 ntBASIC-0.95□□□□□ -2.56
HMGCLP35914 MIR4666B-201ENST00000578142 81 ntBASIC-0.95□□□□□ -2.56
HMGCLP35914 MIR8053-201ENST00000613344 75 ntBASIC-0.95□□□□□ -2.56
HMGCLP35914 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.96□□□□□ -2.56
HMGCLP35914 RNU6-587P-201ENST00000391282 106 ntBASIC-0.96□□□□□ -2.56
HMGCLP35914 MIR4484-201ENST00000582855 83 ntBASIC-0.96□□□□□ -2.56
HMGCLP35914 MIR382-201ENST00000637119 76 ntBASIC-0.96□□□□□ -2.56
HMGCLP35914 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.97□□□□□ -2.56
HMGCLP35914 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.97□□□□□ -2.56
HMGCLP35914 RNA5SP331-201ENST00000364986 107 ntBASIC-0.97□□□□□ -2.56
HMGCLP35914 RNU6-294P-201ENST00000364999 102 ntBASIC-0.97□□□□□ -2.56
HMGCLP35914 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.97□□□□□ -2.56
HMGCLP35914 SCARNA18B-201ENST00000458806 135 ntBASIC-0.97□□□□□ -2.56
HMGCLP35914 RNU6-698P-201ENST00000363523 107 ntBASIC-0.98□□□□□ -2.57
HMGCLP35914 RNU6-34P-201ENST00000364874 107 ntBASIC-0.98□□□□□ -2.57
HMGCLP35914 MIR5582-201ENST00000579697 68 ntBASIC-0.98□□□□□ -2.57
HMGCLP35914 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.99□□□□□ -2.57
HMGCLP35914 SNORD63.1-201ENST00000516178 80 ntBASIC-0.99□□□□□ -2.57
HMGCLP35914 SNORD113.1-201ENST00000363280 73 ntBASIC-1□□□□□ -2.57
HMGCLP35914 RNA5SP215-201ENST00000363440 122 ntBASIC-1□□□□□ -2.57
HMGCLP35914 RNU6-1276P-201ENST00000365372 104 ntBASIC-1□□□□□ -2.57
HMGCLP35914 RNU6-787P-201ENST00000384032 107 ntBASIC-1□□□□□ -2.57
HMGCLP35914 RNU6-820P-201ENST00000384273 107 ntBASIC-1□□□□□ -2.57
HMGCLP35914 MIR29B1-201ENST00000385015 81 ntBASIC-1□□□□□ -2.57
HMGCLP35914 MIR4306-201ENST00000583390 91 ntBASIC-1□□□□□ -2.57
HMGCLP35914 U4.4-201ENST00000620626 117 ntBASIC-1□□□□□ -2.57
HMGCLP35914 RNU6-226P-201ENST00000363778 107 ntBASIC-1.01□□□□□ -2.57
HMGCLP35914 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.01□□□□□ -2.57
HMGCLP35914 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.02□□□□□ -2.57
HMGCLP35914 MIR1468-201ENST00000410600 86 ntBASIC-1.02□□□□□ -2.57
HMGCLP35914 MTND4LP1-201ENST00000446263 157 ntBASIC-1.02□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 213.6 ms