Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.21□□□□□ -2.44
LIMA1Q9UHB6 RNU6-787P-201ENST00000384032 107 ntBASIC-0.21□□□□□ -2.44
LIMA1Q9UHB6 SNORD4A-201ENST00000459174 72 ntBASIC-0.21□□□□□ -2.44
LIMA1Q9UHB6 RNU7-55P-201ENST00000459426 62 ntBASIC-0.21□□□□□ -2.44
LIMA1Q9UHB6 AL590491.3-201ENST00000610731 82 ntBASIC-0.21□□□□□ -2.44
LIMA1Q9UHB6 MIR8064-201ENST00000612863 90 ntBASIC-0.21□□□□□ -2.44
LIMA1Q9UHB6 RNU6-315P-201ENST00000362666 107 ntBASIC-0.22□□□□□ -2.44
LIMA1Q9UHB6 SNORD114-28-201ENST00000363610 72 ntBASIC-0.22□□□□□ -2.44
LIMA1Q9UHB6 RNU6-900P-201ENST00000384498 102 ntBASIC-0.22□□□□□ -2.44
LIMA1Q9UHB6 RNU6-30P-201ENST00000384561 107 ntBASIC-0.22□□□□□ -2.44
LIMA1Q9UHB6 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.22□□□□□ -2.44
LIMA1Q9UHB6 MIRLET7B-201ENST00000385140 83 ntBASIC-0.22□□□□□ -2.44
LIMA1Q9UHB6 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.23□□□□□ -2.45
LIMA1Q9UHB6 SNORA33.1-201ENST00000364957 130 ntBASIC-0.23□□□□□ -2.45
LIMA1Q9UHB6 RNU6-820P-201ENST00000384273 107 ntBASIC-0.23□□□□□ -2.45
LIMA1Q9UHB6 SNORD56B-201ENST00000384713 71 ntBASIC-0.23□□□□□ -2.45
LIMA1Q9UHB6 MIR604-201ENST00000384880 94 ntBASIC-0.23□□□□□ -2.45
LIMA1Q9UHB6 MIR4666B-201ENST00000578142 81 ntBASIC-0.23□□□□□ -2.45
LIMA1Q9UHB6 MIR4712-201ENST00000583750 82 ntBASIC-0.23□□□□□ -2.45
LIMA1Q9UHB6 MIR3666-201ENST00000607845 111 ntBASIC-0.23□□□□□ -2.45
LIMA1Q9UHB6 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.24□□□□□ -2.45
LIMA1Q9UHB6 snoU13.19-201ENST00000459148 104 ntBASIC-0.24□□□□□ -2.45
LIMA1Q9UHB6 HAR1A.1-201ENST00000459583 118 ntBASIC-0.24□□□□□ -2.45
LIMA1Q9UHB6 MIR6739-201ENST00000622461 75 ntBASIC-0.24□□□□□ -2.45
LIMA1Q9UHB6 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.25□□□□□ -2.45
LIMA1Q9UHB6 SNORA8.1-201ENST00000384250 140 ntBASIC-0.25□□□□□ -2.45
LIMA1Q9UHB6 RNU6-242P-201ENST00000384359 107 ntBASIC-0.25□□□□□ -2.45
LIMA1Q9UHB6 RNA5SP476-201ENST00000516613 103 ntBASIC-0.25□□□□□ -2.45
LIMA1Q9UHB6 MIR4484-201ENST00000582855 83 ntBASIC-0.25□□□□□ -2.45
LIMA1Q9UHB6 MIR4493-201ENST00000584016 73 ntBASIC-0.25□□□□□ -2.45
LIMA1Q9UHB6 MIR1245B-201ENST00000636115 69 ntBASIC-0.25□□□□□ -2.45
LIMA1Q9UHB6 SNORD115-23-201ENST00000364461 82 ntBASIC-0.26□□□□□ -2.45
LIMA1Q9UHB6 Y_RNA.388-201ENST00000383919 113 ntBASIC-0.26□□□□□ -2.45
LIMA1Q9UHB6 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.26□□□□□ -2.45
LIMA1Q9UHB6 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.26□□□□□ -2.45
LIMA1Q9UHB6 RNA5SP300-201ENST00000391197 107 ntBASIC-0.26□□□□□ -2.45
LIMA1Q9UHB6 U6.96-201ENST00000636425 70 ntBASIC-0.26□□□□□ -2.45
LIMA1Q9UHB6 MIR101-1-201ENST00000362265 75 ntBASIC-0.27□□□□□ -2.45
LIMA1Q9UHB6 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.27□□□□□ -2.45
LIMA1Q9UHB6 MIR521-2-201ENST00000384818 87 ntBASIC-0.27□□□□□ -2.45
LIMA1Q9UHB6 RNY4P29-201ENST00000410801 97 ntBASIC-0.27□□□□□ -2.45
LIMA1Q9UHB6 MIR3675-201ENST00000583661 73 ntBASIC-0.27□□□□□ -2.45
LIMA1Q9UHB6 RNU6-973P-201ENST00000364690 107 ntBASIC-0.28□□□□□ -2.45
LIMA1Q9UHB6 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.28□□□□□ -2.45
LIMA1Q9UHB6 RNA5SP25-201ENST00000410815 110 ntBASIC-0.28□□□□□ -2.45
LIMA1Q9UHB6 SCARNA18B-201ENST00000458806 135 ntBASIC-0.28□□□□□ -2.45
LIMA1Q9UHB6 AC108676.2-201ENST00000605225 163 ntBASIC-0.28□□□□□ -2.45
LIMA1Q9UHB6 uc_338.36-201ENST00000622331 158 ntBASIC-0.28□□□□□ -2.45
LIMA1Q9UHB6 MIR1297-201ENST00000637311 77 ntBASIC-0.28□□□□□ -2.45
LIMA1Q9UHB6 AC096531.1-201ENST00000419107 107 ntBASIC-0.29□□□□□ -2.46
LIMA1Q9UHB6 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.29□□□□□ -2.46
LIMA1Q9UHB6 RNU6-656P-201ENST00000516785 107 ntBASIC-0.29□□□□□ -2.46
LIMA1Q9UHB6 AL391099.1-201ENST00000624635 187 ntBASIC-0.29□□□□□ -2.46
LIMA1Q9UHB6 MIR4679-1-201ENST00000637619 75 ntBASIC-0.29□□□□□ -2.46
LIMA1Q9UHB6 SNORD114-11-201ENST00000363738 75 ntBASIC-0.3□□□□□ -2.46
LIMA1Q9UHB6 SNORD114-15-201ENST00000364687 72 ntBASIC-0.3□□□□□ -2.46
LIMA1Q9UHB6 RNA5SP451-201ENST00000410588 110 ntBASIC-0.3□□□□□ -2.46
LIMA1Q9UHB6 RPS29P8-201ENST00000445109 171 ntBASIC-0.3□□□□□ -2.46
LIMA1Q9UHB6 RNU6-320P-201ENST00000516511 106 ntBASIC-0.3□□□□□ -2.46
LIMA1Q9UHB6 MIR4280-201ENST00000582178 76 ntBASIC-0.3□□□□□ -2.46
LIMA1Q9UHB6 MIR4263-201ENST00000584745 83 ntBASIC-0.3□□□□□ -2.46
LIMA1Q9UHB6 MIR4788-201ENST00000639104 80 ntBASIC-0.3□□□□□ -2.46
LIMA1Q9UHB6 RNA5SP275-201ENST00000363936 118 ntBASIC-0.31□□□□□ -2.46
LIMA1Q9UHB6 RNU6-604P-201ENST00000390917 100 ntBASIC-0.31□□□□□ -2.46
LIMA1Q9UHB6 SNORA26.2-201ENST00000390922 122 ntBASIC-0.31□□□□□ -2.46
LIMA1Q9UHB6 RNU6-807P-201ENST00000516805 107 ntBASIC-0.31□□□□□ -2.46
LIMA1Q9UHB6 MIR5704-201ENST00000584029 77 ntBASIC-0.31□□□□□ -2.46
LIMA1Q9UHB6 MIR664A-201ENST00000626086 82 ntBASIC-0.31□□□□□ -2.46
LIMA1Q9UHB6 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.32□□□□□ -2.46
LIMA1Q9UHB6 RNA5SP173-201ENST00000364857 136 ntBASIC-0.32□□□□□ -2.46
LIMA1Q9UHB6 RNU6-573P-201ENST00000383938 106 ntBASIC-0.32□□□□□ -2.46
LIMA1Q9UHB6 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.32□□□□□ -2.46
LIMA1Q9UHB6 MIR224-201ENST00000384889 81 ntBASIC-0.32□□□□□ -2.46
LIMA1Q9UHB6 AL445193.1-201ENST00000441183 141 ntBASIC-0.32□□□□□ -2.46
LIMA1Q9UHB6 RNA5SP67-201ENST00000516422 131 ntBASIC-0.32□□□□□ -2.46
LIMA1Q9UHB6 RNA5SP66-201ENST00000517178 101 ntBASIC-0.32□□□□□ -2.46
LIMA1Q9UHB6 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.32□□□□□ -2.46
LIMA1Q9UHB6 CYP3A54P-201ENST00000566950 75 ntBASIC-0.32□□□□□ -2.46
LIMA1Q9UHB6 MIR4432-201ENST00000581823 84 ntBASIC-0.32□□□□□ -2.46
LIMA1Q9UHB6 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.32□□□□□ -2.46
LIMA1Q9UHB6 RNU6-901P-201ENST00000384593 106 ntBASIC-0.33□□□□□ -2.46
LIMA1Q9UHB6 MIR1255B2-201ENST00000408618 67 ntBASIC-0.33□□□□□ -2.46
LIMA1Q9UHB6 RNU6-380P-201ENST00000410207 107 ntBASIC-0.33□□□□□ -2.46
LIMA1Q9UHB6 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.33□□□□□ -2.46
LIMA1Q9UHB6 MIR8068-201ENST00000618032 68 ntBASIC-0.33□□□□□ -2.46
LIMA1Q9UHB6 RNU6-645P-201ENST00000364649 106 ntBASIC-0.34□□□□□ -2.46
LIMA1Q9UHB6 AC114755.3-201ENST00000481111 251 ntBASIC-0.34□□□□□ -2.46
LIMA1Q9UHB6 RNU6-881P-201ENST00000516813 102 ntBASIC-0.34□□□□□ -2.46
LIMA1Q9UHB6 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.35□□□□□ -2.47
LIMA1Q9UHB6 SNORD45.1-201ENST00000363181 77 ntBASIC-0.35□□□□□ -2.47
LIMA1Q9UHB6 SNORD115-22-201ENST00000364456 82 ntBASIC-0.35□□□□□ -2.47
LIMA1Q9UHB6 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.35□□□□□ -2.47
LIMA1Q9UHB6 RNU6-982P-201ENST00000516216 102 ntBASIC-0.35□□□□□ -2.47
LIMA1Q9UHB6 MIR6851-201ENST00000617060 67 ntBASIC-0.35□□□□□ -2.47
LIMA1Q9UHB6 RNU6-228P-201ENST00000362700 106 ntBASIC-0.36□□□□□ -2.47
LIMA1Q9UHB6 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
LIMA1Q9UHB6 SNORD75.1-201ENST00000408373 60 ntBASIC-0.36□□□□□ -2.47
LIMA1Q9UHB6 MIR1302-4-201ENST00000408701 150 ntBASIC-0.36□□□□□ -2.47
LIMA1Q9UHB6 SNORD38.3-201ENST00000516599 73 ntBASIC-0.36□□□□□ -2.47
LIMA1Q9UHB6 RNA5SP169-201ENST00000517268 117 ntBASIC-0.36□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 215.2 ms