Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 MIR7107-201ENST00000611489 80 ntBASIC1.09□□□□□ -2.23
LMCD1Q9NZU5 SNORD115-25-201ENST00000362619 82 ntBASIC1.08□□□□□ -2.24
LMCD1Q9NZU5 SNORA49-201ENST00000386157 136 ntBASIC1.08□□□□□ -2.24
LMCD1Q9NZU5 HMGN2P22-201ENST00000427588 175 ntBASIC1.08□□□□□ -2.24
LMCD1Q9NZU5 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.08□□□□□ -2.24
LMCD1Q9NZU5 AC103810.9-201ENST00000606688 112 ntBASIC1.08□□□□□ -2.24
LMCD1Q9NZU5 RNU6-458P-201ENST00000384179 107 ntBASIC1.07□□□□□ -2.24
LMCD1Q9NZU5 RNU6-1206P-201ENST00000516339 103 ntBASIC1.07□□□□□ -2.24
LMCD1Q9NZU5 MIR548AL-201ENST00000578416 97 ntBASIC1.07□□□□□ -2.24
LMCD1Q9NZU5 SNORD114-21-201ENST00000606412 72 ntBASIC1.07□□□□□ -2.24
LMCD1Q9NZU5 U6.58-201ENST00000613107 107 ntBASIC1.07□□□□□ -2.24
LMCD1Q9NZU5 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.07□□□□□ -2.24
LMCD1Q9NZU5 Y_RNA.69-201ENST00000362885 109 ntBASIC1.06□□□□□ -2.24
LMCD1Q9NZU5 RNU4-38P-201ENST00000364472 129 ntBASIC1.06□□□□□ -2.24
LMCD1Q9NZU5 MIR193B-201ENST00000384907 83 ntBASIC1.06□□□□□ -2.24
LMCD1Q9NZU5 AC244090.1-201ENST00000441884 93 ntBASIC1.06□□□□□ -2.24
LMCD1Q9NZU5 RNA5SP94-201ENST00000516917 108 ntBASIC1.06□□□□□ -2.24
LMCD1Q9NZU5 MIR3973-201ENST00000579824 107 ntBASIC1.06□□□□□ -2.24
LMCD1Q9NZU5 MIR6773-201ENST00000612812 74 ntBASIC1.06□□□□□ -2.24
LMCD1Q9NZU5 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
LMCD1Q9NZU5 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.05□□□□□ -2.24
LMCD1Q9NZU5 RNU6-598P-201ENST00000364017 105 ntBASIC1.05□□□□□ -2.24
LMCD1Q9NZU5 MIR579-201ENST00000385221 98 ntBASIC1.05□□□□□ -2.24
LMCD1Q9NZU5 MIR1273G-201ENST00000577677 100 ntBASIC1.05□□□□□ -2.24
LMCD1Q9NZU5 MIR4752-201ENST00000579672 72 ntBASIC1.05□□□□□ -2.24
LMCD1Q9NZU5 RPL39P28-201ENST00000465655 155 ntBASIC1.04□□□□□ -2.24
LMCD1Q9NZU5 RNU7-160P-201ENST00000516660 62 ntBASIC1.04□□□□□ -2.24
LMCD1Q9NZU5 MIR20A-201ENST00000362279 71 ntBASIC1.03□□□□□ -2.24
LMCD1Q9NZU5 Y_RNA.30-201ENST00000362572 97 ntBASIC1.03□□□□□ -2.24
LMCD1Q9NZU5 RNY1P8-201ENST00000383970 114 ntBASIC1.03□□□□□ -2.24
LMCD1Q9NZU5 AL590095.2-201ENST00000604136 117 ntBASIC1.03□□□□□ -2.24
LMCD1Q9NZU5 U2.18-201ENST00000622185 84 ntBASIC1.03□□□□□ -2.24
LMCD1Q9NZU5 SNORA36.2-201ENST00000384004 127 ntBASIC1.02□□□□□ -2.25
LMCD1Q9NZU5 MIRLET7B-201ENST00000385140 83 ntBASIC1.02□□□□□ -2.25
LMCD1Q9NZU5 RNU7-151P-201ENST00000516930 53 ntBASIC1.02□□□□□ -2.25
LMCD1Q9NZU5 MIR4661-201ENST00000582720 75 ntBASIC1.02□□□□□ -2.25
LMCD1Q9NZU5 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
LMCD1Q9NZU5 MIR429-201ENST00000362106 83 ntBASIC1.01□□□□□ -2.25
LMCD1Q9NZU5 MIR125B1-201ENST00000385236 88 ntBASIC1.01□□□□□ -2.25
LMCD1Q9NZU5 RNU6-696P-201ENST00000390834 107 ntBASIC1.01□□□□□ -2.25
LMCD1Q9NZU5 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.01□□□□□ -2.25
LMCD1Q9NZU5 AL353765.1-201ENST00000605514 183 ntBASIC1□□□□□ -2.25
LMCD1Q9NZU5 MIR6513-201ENST00000621188 64 ntBASIC1□□□□□ -2.25
LMCD1Q9NZU5 RNU6-502P-201ENST00000362419 108 ntBASIC0.99□□□□□ -2.25
LMCD1Q9NZU5 RNU4-45P-201ENST00000365469 141 ntBASIC0.99□□□□□ -2.25
LMCD1Q9NZU5 AL451105.1-201ENST00000450005 189 ntBASIC0.99□□□□□ -2.25
LMCD1Q9NZU5 RNA5SP470-201ENST00000516463 106 ntBASIC0.99□□□□□ -2.25
LMCD1Q9NZU5 RNU6-175P-201ENST00000516896 107 ntBASIC0.99□□□□□ -2.25
LMCD1Q9NZU5 Y_RNA.178-201ENST00000363832 102 ntBASIC0.98□□□□□ -2.25
LMCD1Q9NZU5 AC010487.4-201ENST00000637027 61 ntBASIC0.98□□□□□ -2.25
LMCD1Q9NZU5 AC069271.1-201ENST00000445577 156 ntBASIC0.97□□□□□ -2.25
LMCD1Q9NZU5 MIR5706-201ENST00000579841 80 ntBASIC0.97□□□□□ -2.25
LMCD1Q9NZU5 MIR4714-201ENST00000580728 77 ntBASIC0.97□□□□□ -2.25
LMCD1Q9NZU5 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.97□□□□□ -2.25
LMCD1Q9NZU5 MIR924-201ENST00000638017 53 ntBASIC0.97□□□□□ -2.25
LMCD1Q9NZU5 RNA5SP517-201ENST00000364724 117 ntBASIC0.96□□□□□ -2.26
LMCD1Q9NZU5 SNORD2-201ENST00000459163 69 ntBASIC0.96□□□□□ -2.26
LMCD1Q9NZU5 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.96□□□□□ -2.26
LMCD1Q9NZU5 RNU6-782P-201ENST00000516852 104 ntBASIC0.96□□□□□ -2.26
LMCD1Q9NZU5 RNU7-188P-201ENST00000517063 64 ntBASIC0.96□□□□□ -2.26
LMCD1Q9NZU5 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
LMCD1Q9NZU5 SNORD114-29-201ENST00000364819 70 ntBASIC0.95□□□□□ -2.26
LMCD1Q9NZU5 RNU6-828P-201ENST00000364876 107 ntBASIC0.95□□□□□ -2.26
LMCD1Q9NZU5 MIR329-2-201ENST00000385029 84 ntBASIC0.95□□□□□ -2.26
LMCD1Q9NZU5 Y_RNA.698-201ENST00000516798 118 ntBASIC0.95□□□□□ -2.26
LMCD1Q9NZU5 SNORA25.18-201ENST00000607153 114 ntBASIC0.95□□□□□ -2.26
LMCD1Q9NZU5 Y_RNA.139-201ENST00000363464 102 ntBASIC0.94□□□□□ -2.26
LMCD1Q9NZU5 SNORD114-23-201ENST00000363536 72 ntBASIC0.94□□□□□ -2.26
LMCD1Q9NZU5 MIR146A-201ENST00000385201 99 ntBASIC0.94□□□□□ -2.26
LMCD1Q9NZU5 MIR936-201ENST00000401264 98 ntBASIC0.94□□□□□ -2.26
LMCD1Q9NZU5 AC098934.3-201ENST00000430450 190 ntBASIC0.94□□□□□ -2.26
LMCD1Q9NZU5 RNU6-1262P-201ENST00000516217 96 ntBASIC0.94□□□□□ -2.26
LMCD1Q9NZU5 Y_RNA.68-201ENST00000362881 102 ntBASIC0.93□□□□□ -2.26
LMCD1Q9NZU5 RNU6-1204P-201ENST00000363948 107 ntBASIC0.93□□□□□ -2.26
LMCD1Q9NZU5 SNORD115-23-201ENST00000364461 82 ntBASIC0.93□□□□□ -2.26
LMCD1Q9NZU5 MIR29B1-201ENST00000385015 81 ntBASIC0.93□□□□□ -2.26
LMCD1Q9NZU5 MIR548H4-201ENST00000408689 111 ntBASIC0.93□□□□□ -2.26
LMCD1Q9NZU5 RNU6-1267P-201ENST00000410747 107 ntBASIC0.93□□□□□ -2.26
LMCD1Q9NZU5 ACA64.5-201ENST00000516207 127 ntBASIC0.93□□□□□ -2.26
LMCD1Q9NZU5 AL353803.5-201ENST00000599815 141 ntBASIC0.93□□□□□ -2.26
LMCD1Q9NZU5 MTRNR2L9-201ENST00000622562 75 ntBASIC0.93□□□□□ -2.26
LMCD1Q9NZU5 U6.103-201ENST00000637085 61 ntBASIC0.93□□□□□ -2.26
LMCD1Q9NZU5 RNU6-822P-201ENST00000362707 106 ntBASIC0.92□□□□□ -2.26
LMCD1Q9NZU5 Y_RNA.115-201ENST00000363272 98 ntBASIC0.92□□□□□ -2.26
LMCD1Q9NZU5 RNU6-974P-201ENST00000384099 108 ntBASIC0.92□□□□□ -2.26
LMCD1Q9NZU5 RNU6-1232P-201ENST00000516299 86 ntBASIC0.92□□□□□ -2.26
LMCD1Q9NZU5 MIR4698-201ENST00000577795 80 ntBASIC0.92□□□□□ -2.26
LMCD1Q9NZU5 MIR548AA1-201ENST00000384971 97 ntBASIC0.91□□□□□ -2.26
LMCD1Q9NZU5 MIR140-201ENST00000385282 100 ntBASIC0.91□□□□□ -2.26
LMCD1Q9NZU5 RNU6-742P-201ENST00000365289 107 ntBASIC0.9□□□□□ -2.27
LMCD1Q9NZU5 RNU6-945P-201ENST00000383947 107 ntBASIC0.9□□□□□ -2.27
LMCD1Q9NZU5 RNU6-1036P-201ENST00000383959 104 ntBASIC0.9□□□□□ -2.27
LMCD1Q9NZU5 Y_RNA.433-201ENST00000384089 102 ntBASIC0.9□□□□□ -2.27
LMCD1Q9NZU5 RNU6-59P-201ENST00000384787 107 ntBASIC0.9□□□□□ -2.27
LMCD1Q9NZU5 MIR608-201ENST00000384820 100 ntBASIC0.9□□□□□ -2.27
LMCD1Q9NZU5 SNORD57-201ENST00000448188 72 ntBASIC0.9□□□□□ -2.27
LMCD1Q9NZU5 Y_RNA.423-201ENST00000384057 113 ntBASIC0.89□□□□□ -2.27
LMCD1Q9NZU5 RNU6-1008P-201ENST00000384160 104 ntBASIC0.89□□□□□ -2.27
LMCD1Q9NZU5 MIR501-201ENST00000390204 84 ntBASIC0.89□□□□□ -2.27
LMCD1Q9NZU5 RNU6-721P-201ENST00000410155 105 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms