Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 RNU6-537P-201ENST00000517277 103 ntBASIC-1.99□□□□□ -2.73
CDC42SE1Q9NRR8 MIR6086-201ENST00000638065 55 ntBASIC-1.99□□□□□ -2.73
CDC42SE1Q9NRR8 RNU6-598P-201ENST00000364017 105 ntBASIC-2□□□□□ -2.73
CDC42SE1Q9NRR8 Y_RNA.468-201ENST00000384298 102 ntBASIC-2□□□□□ -2.73
CDC42SE1Q9NRR8 MTCYBP9-201ENST00000431021 303 ntBASIC-2□□□□□ -2.73
CDC42SE1Q9NRR8 SCARNA23-201ENST00000516060 130 ntBASIC-2□□□□□ -2.73
CDC42SE1Q9NRR8 MIR4801-201ENST00000582704 82 ntBASIC-2□□□□□ -2.73
CDC42SE1Q9NRR8 RNU6-841P-201ENST00000383872 107 ntBASIC-2.01□□□□□ -2.73
CDC42SE1Q9NRR8 Y_RNA.400-201ENST00000383963 111 ntBASIC-2.01□□□□□ -2.73
CDC42SE1Q9NRR8 RNU6-904P-201ENST00000516206 101 ntBASIC-2.01□□□□□ -2.73
CDC42SE1Q9NRR8 MIR3123-201ENST00000583417 75 ntBASIC-2.01□□□□□ -2.73
CDC42SE1Q9NRR8 Y_RNA.145-201ENST00000363527 102 ntBASIC-2.02□□□□□ -2.73
CDC42SE1Q9NRR8 Y_RNA.325-201ENST00000365171 122 ntBASIC-2.02□□□□□ -2.73
CDC42SE1Q9NRR8 SNORD77.2-201ENST00000391045 68 ntBASIC-2.02□□□□□ -2.73
CDC42SE1Q9NRR8 RNA5SP272-201ENST00000516095 111 ntBASIC-2.02□□□□□ -2.73
CDC42SE1Q9NRR8 AC120024.2-201ENST00000576526 175 ntBASIC-2.02□□□□□ -2.73
CDC42SE1Q9NRR8 Y_RNA.96-201ENST00000363092 109 ntBASIC-2.03□□□□□ -2.73
CDC42SE1Q9NRR8 RNU6-563P-201ENST00000364872 108 ntBASIC-2.03□□□□□ -2.73
CDC42SE1Q9NRR8 Y_RNA.307-201ENST00000365022 117 ntBASIC-2.03□□□□□ -2.73
CDC42SE1Q9NRR8 MIR548C-201ENST00000384815 97 ntBASIC-2.03□□□□□ -2.73
CDC42SE1Q9NRR8 AC008737.2-201ENST00000599446 118 ntBASIC-2.03□□□□□ -2.73
CDC42SE1Q9NRR8 RNU6-574P-201ENST00000384265 107 ntBASIC-2.04□□□□□ -2.74
CDC42SE1Q9NRR8 MTND4LP9-201ENST00000427694 174 ntBASIC-2.04□□□□□ -2.74
CDC42SE1Q9NRR8 MIR4756-201ENST00000577874 78 ntBASIC-2.04□□□□□ -2.74
CDC42SE1Q9NRR8 MIR664B-201ENST00000626756 61 ntBASIC-2.04□□□□□ -2.74
CDC42SE1Q9NRR8 MIR429-201ENST00000362106 83 ntBASIC-2.05□□□□□ -2.74
CDC42SE1Q9NRR8 Y_RNA.181-201ENST00000363872 101 ntBASIC-2.05□□□□□ -2.74
CDC42SE1Q9NRR8 Y_RNA.281-201ENST00000364774 94 ntBASIC-2.05□□□□□ -2.74
CDC42SE1Q9NRR8 MIR548AM-201ENST00000584298 74 ntBASIC-2.05□□□□□ -2.74
CDC42SE1Q9NRR8 Y_RNA.398-201ENST00000383952 99 ntBASIC-2.06□□□□□ -2.74
CDC42SE1Q9NRR8 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.06□□□□□ -2.74
CDC42SE1Q9NRR8 RNU6-804P-201ENST00000384286 107 ntBASIC-2.06□□□□□ -2.74
CDC42SE1Q9NRR8 Y_RNA.525-201ENST00000384570 113 ntBASIC-2.06□□□□□ -2.74
CDC42SE1Q9NRR8 MIR606-201ENST00000384851 96 ntBASIC-2.06□□□□□ -2.74
CDC42SE1Q9NRR8 MIR1285-2-201ENST00000408311 88 ntBASIC-2.06□□□□□ -2.74
CDC42SE1Q9NRR8 RNU7-107P-201ENST00000459121 61 ntBASIC-2.06□□□□□ -2.74
CDC42SE1Q9NRR8 RNU6-426P-201ENST00000516464 97 ntBASIC-2.06□□□□□ -2.74
CDC42SE1Q9NRR8 RNU6-1089P-201ENST00000516473 104 ntBASIC-2.06□□□□□ -2.74
CDC42SE1Q9NRR8 U4.4-201ENST00000620626 117 ntBASIC-2.06□□□□□ -2.74
CDC42SE1Q9NRR8 U2.18-201ENST00000622185 84 ntBASIC-2.06□□□□□ -2.74
CDC42SE1Q9NRR8 MIR3914-2-201ENST00000637339 95 ntBASIC-2.06□□□□□ -2.74
CDC42SE1Q9NRR8 SNORD33.1-201ENST00000516213 88 ntBASIC-2.07□□□□□ -2.74
CDC42SE1Q9NRR8 MIR3170-201ENST00000582699 77 ntBASIC-2.07□□□□□ -2.74
CDC42SE1Q9NRR8 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.07□□□□□ -2.74
CDC42SE1Q9NRR8 Y_RNA.264-201ENST00000364665 102 ntBASIC-2.08□□□□□ -2.74
CDC42SE1Q9NRR8 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-2.08□□□□□ -2.74
CDC42SE1Q9NRR8 RNU6-698P-201ENST00000363523 107 ntBASIC-2.09□□□□□ -2.74
CDC42SE1Q9NRR8 RNU6-34P-201ENST00000364874 107 ntBASIC-2.09□□□□□ -2.74
CDC42SE1Q9NRR8 MIR1302-3-201ENST00000408128 138 ntBASIC-2.09□□□□□ -2.74
CDC42SE1Q9NRR8 RNU7-61P-201ENST00000515897 61 ntBASIC-2.09□□□□□ -2.74
CDC42SE1Q9NRR8 RNA5SP395-201ENST00000516567 118 ntBASIC-2.09□□□□□ -2.74
CDC42SE1Q9NRR8 Y_RNA.712-201ENST00000517011 92 ntBASIC-2.09□□□□□ -2.74
CDC42SE1Q9NRR8 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.09□□□□□ -2.74
CDC42SE1Q9NRR8 MIR409-201ENST00000362237 79 ntBASIC-2.1□□□□□ -2.75
CDC42SE1Q9NRR8 RNU6-738P-201ENST00000384531 106 ntBASIC-2.1□□□□□ -2.75
CDC42SE1Q9NRR8 RNU6-258P-201ENST00000390884 101 ntBASIC-2.1□□□□□ -2.75
CDC42SE1Q9NRR8 RNU6-1108P-201ENST00000516308 104 ntBASIC-2.1□□□□□ -2.75
CDC42SE1Q9NRR8 Y_RNA.8-201ENST00000362353 102 ntBASIC-2.11□□□□□ -2.75
CDC42SE1Q9NRR8 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.11□□□□□ -2.75
CDC42SE1Q9NRR8 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.11□□□□□ -2.75
CDC42SE1Q9NRR8 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.11□□□□□ -2.75
CDC42SE1Q9NRR8 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.11□□□□□ -2.75
CDC42SE1Q9NRR8 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.12□□□□□ -2.75
CDC42SE1Q9NRR8 Y_RNA.433-201ENST00000384089 102 ntBASIC-2.12□□□□□ -2.75
CDC42SE1Q9NRR8 Y_RNA.488-201ENST00000384403 102 ntBASIC-2.12□□□□□ -2.75
CDC42SE1Q9NRR8 MIR519C-201ENST00000385053 87 ntBASIC-2.12□□□□□ -2.75
CDC42SE1Q9NRR8 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.12□□□□□ -2.75
CDC42SE1Q9NRR8 RNU6-330P-201ENST00000363015 107 ntBASIC-2.13□□□□□ -2.75
CDC42SE1Q9NRR8 Y_RNA.190-201ENST00000363964 101 ntBASIC-2.13□□□□□ -2.75
CDC42SE1Q9NRR8 RNU6-200P-201ENST00000364743 107 ntBASIC-2.13□□□□□ -2.75
CDC42SE1Q9NRR8 RNU6-982P-201ENST00000516216 102 ntBASIC-2.13□□□□□ -2.75
CDC42SE1Q9NRR8 MIR548V-201ENST00000584165 80 ntBASIC-2.13□□□□□ -2.75
CDC42SE1Q9NRR8 RNU6-624P-201ENST00000363411 107 ntBASIC-2.14□□□□□ -2.75
CDC42SE1Q9NRR8 RNU6-1107P-201ENST00000364817 104 ntBASIC-2.14□□□□□ -2.75
CDC42SE1Q9NRR8 MIR548AA1-201ENST00000384971 97 ntBASIC-2.14□□□□□ -2.75
CDC42SE1Q9NRR8 RNU6-980P-201ENST00000516925 103 ntBASIC-2.14□□□□□ -2.75
CDC42SE1Q9NRR8 RNU6-158P-201ENST00000517104 100 ntBASIC-2.14□□□□□ -2.75
CDC42SE1Q9NRR8 MTND5P41-201ENST00000517498 206 ntBASIC-2.14□□□□□ -2.75
CDC42SE1Q9NRR8 MIR3675-201ENST00000583661 73 ntBASIC-2.14□□□□□ -2.75
CDC42SE1Q9NRR8 U7.3-201ENST00000616123 62 ntBASIC-2.14□□□□□ -2.75
CDC42SE1Q9NRR8 SNORA40-201ENST00000388090 126 ntBASIC-2.15□□□□□ -2.75
CDC42SE1Q9NRR8 AC004792.1-201ENST00000614523 137 ntBASIC-2.15□□□□□ -2.75
CDC42SE1Q9NRR8 U6.95-201ENST00000636931 70 ntBASIC-2.15□□□□□ -2.75
CDC42SE1Q9NRR8 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.16□□□□□ -2.76
CDC42SE1Q9NRR8 SNORD116-16-201ENST00000384533 92 ntBASIC-2.16□□□□□ -2.76
CDC42SE1Q9NRR8 MIR590-201ENST00000385008 97 ntBASIC-2.16□□□□□ -2.76
CDC42SE1Q9NRR8 RNU6-604P-201ENST00000390917 100 ntBASIC-2.16□□□□□ -2.76
CDC42SE1Q9NRR8 RNU6-257P-201ENST00000410238 98 ntBASIC-2.16□□□□□ -2.76
CDC42SE1Q9NRR8 RNA5SP266-201ENST00000410273 108 ntBASIC-2.16□□□□□ -2.76
CDC42SE1Q9NRR8 RNU4-88P-201ENST00000411220 86 ntBASIC-2.16□□□□□ -2.76
CDC42SE1Q9NRR8 MTATP8P2-201ENST00000435212 202 ntBASIC-2.16□□□□□ -2.76
CDC42SE1Q9NRR8 RNU6-162P-201ENST00000516228 103 ntBASIC-2.16□□□□□ -2.76
CDC42SE1Q9NRR8 Y_RNA.700-201ENST00000516806 100 ntBASIC-2.16□□□□□ -2.76
CDC42SE1Q9NRR8 Y_RNA.193-201ENST00000363979 102 ntBASIC-2.17□□□□□ -2.76
CDC42SE1Q9NRR8 RNU6-1211P-201ENST00000459179 105 ntBASIC-2.17□□□□□ -2.76
CDC42SE1Q9NRR8 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.17□□□□□ -2.76
CDC42SE1Q9NRR8 RNU6-880P-201ENST00000384526 107 ntBASIC-2.18□□□□□ -2.76
CDC42SE1Q9NRR8 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.18□□□□□ -2.76
CDC42SE1Q9NRR8 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.18□□□□□ -2.76
CDC42SE1Q9NRR8 AC013734.1-201ENST00000619329 111 ntBASIC-2.18□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 218.6 ms