Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 MIR1297-201ENST00000637311 77 ntBASIC-0.29□□□□□ -2.46
SIX2Q9NPC8 RNU6-330P-201ENST00000363015 107 ntBASIC-0.3□□□□□ -2.46
SIX2Q9NPC8 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.3□□□□□ -2.46
SIX2Q9NPC8 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.3□□□□□ -2.46
SIX2Q9NPC8 SNORA33.1-201ENST00000364957 130 ntBASIC-0.3□□□□□ -2.46
SIX2Q9NPC8 SNORA8.1-201ENST00000384250 140 ntBASIC-0.3□□□□□ -2.46
SIX2Q9NPC8 SNORD56B-201ENST00000384713 71 ntBASIC-0.3□□□□□ -2.46
SIX2Q9NPC8 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.3□□□□□ -2.46
SIX2Q9NPC8 RNA5SP395-201ENST00000516567 118 ntBASIC-0.3□□□□□ -2.46
SIX2Q9NPC8 MIR5589-201ENST00000579442 60 ntBASIC-0.3□□□□□ -2.46
SIX2Q9NPC8 MIR4645-201ENST00000583158 77 ntBASIC-0.3□□□□□ -2.46
SIX2Q9NPC8 RNU6-973P-201ENST00000364690 107 ntBASIC-0.31□□□□□ -2.46
SIX2Q9NPC8 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.31□□□□□ -2.46
SIX2Q9NPC8 MIR521-2-201ENST00000384818 87 ntBASIC-0.31□□□□□ -2.46
SIX2Q9NPC8 RNU6-807P-201ENST00000516805 107 ntBASIC-0.31□□□□□ -2.46
SIX2Q9NPC8 MIR3675-201ENST00000583661 73 ntBASIC-0.31□□□□□ -2.46
SIX2Q9NPC8 AC090617.8-201ENST00000623339 167 ntBASIC-0.31□□□□□ -2.46
SIX2Q9NPC8 MIR1245B-201ENST00000636115 69 ntBASIC-0.31□□□□□ -2.46
SIX2Q9NPC8 MIR4788-201ENST00000639104 80 ntBASIC-0.31□□□□□ -2.46
SIX2Q9NPC8 SNORD73B-201ENST00000364394 72 ntBASIC-0.32□□□□□ -2.46
SIX2Q9NPC8 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.32□□□□□ -2.46
SIX2Q9NPC8 RNU6-901P-201ENST00000384593 106 ntBASIC-0.32□□□□□ -2.46
SIX2Q9NPC8 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.32□□□□□ -2.46
SIX2Q9NPC8 RNA5SP66-201ENST00000517178 101 ntBASIC-0.32□□□□□ -2.46
SIX2Q9NPC8 MIR4666B-201ENST00000578142 81 ntBASIC-0.32□□□□□ -2.46
SIX2Q9NPC8 MIR4802-201ENST00000581881 80 ntBASIC-0.32□□□□□ -2.46
SIX2Q9NPC8 MIR4712-201ENST00000583750 82 ntBASIC-0.32□□□□□ -2.46
SIX2Q9NPC8 AL391099.1-201ENST00000624635 187 ntBASIC-0.32□□□□□ -2.46
SIX2Q9NPC8 SNORD115-23-201ENST00000364461 82 ntBASIC-0.33□□□□□ -2.46
SIX2Q9NPC8 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.33□□□□□ -2.46
SIX2Q9NPC8 RNU6-35P-201ENST00000384530 107 ntBASIC-0.33□□□□□ -2.46
SIX2Q9NPC8 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.33□□□□□ -2.46
SIX2Q9NPC8 AC096531.1-201ENST00000419107 107 ntBASIC-0.33□□□□□ -2.46
SIX2Q9NPC8 MIR4636-201ENST00000582271 80 ntBASIC-0.33□□□□□ -2.46
SIX2Q9NPC8 MIR4484-201ENST00000582855 83 ntBASIC-0.33□□□□□ -2.46
SIX2Q9NPC8 uc_338.36-201ENST00000622331 158 ntBASIC-0.33□□□□□ -2.46
SIX2Q9NPC8 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.34□□□□□ -2.46
SIX2Q9NPC8 SNORD114-28-201ENST00000363610 72 ntBASIC-0.35□□□□□ -2.47
SIX2Q9NPC8 AL445193.1-201ENST00000441183 141 ntBASIC-0.35□□□□□ -2.47
SIX2Q9NPC8 MIR4432-201ENST00000581823 84 ntBASIC-0.35□□□□□ -2.47
SIX2Q9NPC8 AP001180.6-201ENST00000584918 159 ntBASIC-0.35□□□□□ -2.47
SIX2Q9NPC8 snoR1.1-201ENST00000628177 80 ntBASIC-0.35□□□□□ -2.47
SIX2Q9NPC8 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.35□□□□□ -2.47
SIX2Q9NPC8 SNORD114-11-201ENST00000363738 75 ntBASIC-0.36□□□□□ -2.47
SIX2Q9NPC8 RNU6-787P-201ENST00000384032 107 ntBASIC-0.36□□□□□ -2.47
SIX2Q9NPC8 MIR4280-201ENST00000582178 76 ntBASIC-0.36□□□□□ -2.47
SIX2Q9NPC8 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.37□□□□□ -2.47
SIX2Q9NPC8 RNU6-320P-201ENST00000516511 106 ntBASIC-0.37□□□□□ -2.47
SIX2Q9NPC8 RNU6-656P-201ENST00000516785 107 ntBASIC-0.37□□□□□ -2.47
SIX2Q9NPC8 CYP3A54P-201ENST00000566950 75 ntBASIC-0.37□□□□□ -2.47
SIX2Q9NPC8 AC093726.3-201ENST00000637588 150 ntBASIC-0.37□□□□□ -2.47
SIX2Q9NPC8 RNU6-604P-201ENST00000390917 100 ntBASIC-0.38□□□□□ -2.47
SIX2Q9NPC8 SNORA26.2-201ENST00000390922 122 ntBASIC-0.38□□□□□ -2.47
SIX2Q9NPC8 RNY4P29-201ENST00000410801 97 ntBASIC-0.38□□□□□ -2.47
SIX2Q9NPC8 Z95118.1-201ENST00000421372 247 ntBASIC-0.38□□□□□ -2.47
SIX2Q9NPC8 MIR4493-201ENST00000584016 73 ntBASIC-0.38□□□□□ -2.47
SIX2Q9NPC8 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.39□□□□□ -2.47
SIX2Q9NPC8 RNU6-645P-201ENST00000364649 106 ntBASIC-0.39□□□□□ -2.47
SIX2Q9NPC8 MIR1255B2-201ENST00000408618 67 ntBASIC-0.39□□□□□ -2.47
SIX2Q9NPC8 MIR5704-201ENST00000584029 77 ntBASIC-0.39□□□□□ -2.47
SIX2Q9NPC8 MIR6851-201ENST00000617060 67 ntBASIC-0.39□□□□□ -2.47
SIX2Q9NPC8 MIR101-1-201ENST00000362265 75 ntBASIC-0.4□□□□□ -2.47
SIX2Q9NPC8 SNORD45.1-201ENST00000363181 77 ntBASIC-0.4□□□□□ -2.47
SIX2Q9NPC8 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.4□□□□□ -2.47
SIX2Q9NPC8 SCARNA18B-201ENST00000458806 135 ntBASIC-0.4□□□□□ -2.47
SIX2Q9NPC8 RNA5SP470-201ENST00000516463 106 ntBASIC-0.4□□□□□ -2.47
SIX2Q9NPC8 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.4□□□□□ -2.47
SIX2Q9NPC8 Y_RNA.388-201ENST00000383919 113 ntBASIC-0.41□□□□□ -2.48
SIX2Q9NPC8 MIR1265-201ENST00000408444 86 ntBASIC-0.41□□□□□ -2.48
SIX2Q9NPC8 MIR6854-201ENST00000614935 69 ntBASIC-0.41□□□□□ -2.48
SIX2Q9NPC8 SNORD14C-201ENST00000365382 88 ntBASIC-0.42□□□□□ -2.48
SIX2Q9NPC8 MIR1302-4-201ENST00000408701 150 ntBASIC-0.42□□□□□ -2.48
SIX2Q9NPC8 RNU6-758P-201ENST00000516292 89 ntBASIC-0.42□□□□□ -2.48
SIX2Q9NPC8 SNORD38.3-201ENST00000516599 73 ntBASIC-0.42□□□□□ -2.48
SIX2Q9NPC8 AL353803.5-201ENST00000599815 141 ntBASIC-0.42□□□□□ -2.48
SIX2Q9NPC8 MIR8064-201ENST00000612863 90 ntBASIC-0.42□□□□□ -2.48
SIX2Q9NPC8 MIR3202-2-201ENST00000635980 79 ntBASIC-0.42□□□□□ -2.48
SIX2Q9NPC8 RNA5SP275-201ENST00000363936 118 ntBASIC-0.43□□□□□ -2.48
SIX2Q9NPC8 RNA5SP173-201ENST00000364857 136 ntBASIC-0.43□□□□□ -2.48
SIX2Q9NPC8 MIR604-201ENST00000384880 94 ntBASIC-0.43□□□□□ -2.48
SIX2Q9NPC8 RNA5SP451-201ENST00000410588 110 ntBASIC-0.43□□□□□ -2.48
SIX2Q9NPC8 AC114755.3-201ENST00000481111 251 ntBASIC-0.43□□□□□ -2.48
SIX2Q9NPC8 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.43□□□□□ -2.48
SIX2Q9NPC8 MIR8068-201ENST00000618032 68 ntBASIC-0.43□□□□□ -2.48
SIX2Q9NPC8 MIR664A-201ENST00000626086 82 ntBASIC-0.43□□□□□ -2.48
SIX2Q9NPC8 SNORD115-22-201ENST00000364456 82 ntBASIC-0.44□□□□□ -2.48
SIX2Q9NPC8 SNORA62.4-201ENST00000365504 151 ntBASIC-0.44□□□□□ -2.48
SIX2Q9NPC8 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.44□□□□□ -2.48
SIX2Q9NPC8 SNORD126-201ENST00000459475 77 ntBASIC-0.44□□□□□ -2.48
SIX2Q9NPC8 MIR8053-201ENST00000613344 75 ntBASIC-0.44□□□□□ -2.48
SIX2Q9NPC8 MIR4679-1-201ENST00000637619 75 ntBASIC-0.44□□□□□ -2.48
SIX2Q9NPC8 RNU6-573P-201ENST00000383938 106 ntBASIC-0.45□□□□□ -2.48
SIX2Q9NPC8 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.45□□□□□ -2.48
SIX2Q9NPC8 MIR196A2-201ENST00000385189 110 ntBASIC-0.45□□□□□ -2.48
SIX2Q9NPC8 RNA5SP25-201ENST00000410815 110 ntBASIC-0.45□□□□□ -2.48
SIX2Q9NPC8 RNU7-154P-201ENST00000516194 62 ntBASIC-0.45□□□□□ -2.48
SIX2Q9NPC8 RNU6-982P-201ENST00000516216 102 ntBASIC-0.45□□□□□ -2.48
SIX2Q9NPC8 RNU6-881P-201ENST00000516813 102 ntBASIC-0.45□□□□□ -2.48
SIX2Q9NPC8 RNA5SP169-201ENST00000517268 117 ntBASIC-0.45□□□□□ -2.48
SIX2Q9NPC8 MIR6086-201ENST00000638065 55 ntBASIC-0.45□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms