Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 MIR1297-201ENST00000637311 77 ntBASIC-0.29□□□□□ -2.46
SIX2Q9NPC8 RNU6-330P-201ENST00000363015 107 ntBASIC-0.3□□□□□ -2.46
SIX2Q9NPC8 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.3□□□□□ -2.46
SIX2Q9NPC8 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.3□□□□□ -2.46
SIX2Q9NPC8 SNORA33.1-201ENST00000364957 130 ntBASIC-0.3□□□□□ -2.46
SIX2Q9NPC8 SNORA8.1-201ENST00000384250 140 ntBASIC-0.3□□□□□ -2.46
SIX2Q9NPC8 SNORD56B-201ENST00000384713 71 ntBASIC-0.3□□□□□ -2.46
SIX2Q9NPC8 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.3□□□□□ -2.46
SIX2Q9NPC8 RNA5SP395-201ENST00000516567 118 ntBASIC-0.3□□□□□ -2.46
SIX2Q9NPC8 MIR5589-201ENST00000579442 60 ntBASIC-0.3□□□□□ -2.46
SIX2Q9NPC8 MIR4645-201ENST00000583158 77 ntBASIC-0.3□□□□□ -2.46
SIX2Q9NPC8 RNU6-973P-201ENST00000364690 107 ntBASIC-0.31□□□□□ -2.46
SIX2Q9NPC8 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.31□□□□□ -2.46
SIX2Q9NPC8 MIR521-2-201ENST00000384818 87 ntBASIC-0.31□□□□□ -2.46
SIX2Q9NPC8 RNU6-807P-201ENST00000516805 107 ntBASIC-0.31□□□□□ -2.46
SIX2Q9NPC8 MIR3675-201ENST00000583661 73 ntBASIC-0.31□□□□□ -2.46
SIX2Q9NPC8 AC090617.8-201ENST00000623339 167 ntBASIC-0.31□□□□□ -2.46
SIX2Q9NPC8 MIR1245B-201ENST00000636115 69 ntBASIC-0.31□□□□□ -2.46
SIX2Q9NPC8 MIR4788-201ENST00000639104 80 ntBASIC-0.31□□□□□ -2.46
SIX2Q9NPC8 SNORD73B-201ENST00000364394 72 ntBASIC-0.32□□□□□ -2.46
SIX2Q9NPC8 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.32□□□□□ -2.46
SIX2Q9NPC8 RNU6-901P-201ENST00000384593 106 ntBASIC-0.32□□□□□ -2.46
SIX2Q9NPC8 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.32□□□□□ -2.46
SIX2Q9NPC8 RNA5SP66-201ENST00000517178 101 ntBASIC-0.32□□□□□ -2.46
SIX2Q9NPC8 MIR4666B-201ENST00000578142 81 ntBASIC-0.32□□□□□ -2.46
SIX2Q9NPC8 MIR4802-201ENST00000581881 80 ntBASIC-0.32□□□□□ -2.46
SIX2Q9NPC8 MIR4712-201ENST00000583750 82 ntBASIC-0.32□□□□□ -2.46
SIX2Q9NPC8 AL391099.1-201ENST00000624635 187 ntBASIC-0.32□□□□□ -2.46
SIX2Q9NPC8 SNORD115-23-201ENST00000364461 82 ntBASIC-0.33□□□□□ -2.46
SIX2Q9NPC8 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.33□□□□□ -2.46
SIX2Q9NPC8 RNU6-35P-201ENST00000384530 107 ntBASIC-0.33□□□□□ -2.46
SIX2Q9NPC8 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.33□□□□□ -2.46
SIX2Q9NPC8 AC096531.1-201ENST00000419107 107 ntBASIC-0.33□□□□□ -2.46
SIX2Q9NPC8 MIR4636-201ENST00000582271 80 ntBASIC-0.33□□□□□ -2.46
SIX2Q9NPC8 MIR4484-201ENST00000582855 83 ntBASIC-0.33□□□□□ -2.46
SIX2Q9NPC8 uc_338.36-201ENST00000622331 158 ntBASIC-0.33□□□□□ -2.46
SIX2Q9NPC8 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.34□□□□□ -2.46
SIX2Q9NPC8 SNORD114-28-201ENST00000363610 72 ntBASIC-0.35□□□□□ -2.47
SIX2Q9NPC8 AL445193.1-201ENST00000441183 141 ntBASIC-0.35□□□□□ -2.47
SIX2Q9NPC8 MIR4432-201ENST00000581823 84 ntBASIC-0.35□□□□□ -2.47
SIX2Q9NPC8 AP001180.6-201ENST00000584918 159 ntBASIC-0.35□□□□□ -2.47
SIX2Q9NPC8 snoR1.1-201ENST00000628177 80 ntBASIC-0.35□□□□□ -2.47
SIX2Q9NPC8 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.35□□□□□ -2.47
SIX2Q9NPC8 SNORD114-11-201ENST00000363738 75 ntBASIC-0.36□□□□□ -2.47
SIX2Q9NPC8 RNU6-787P-201ENST00000384032 107 ntBASIC-0.36□□□□□ -2.47
SIX2Q9NPC8 MIR4280-201ENST00000582178 76 ntBASIC-0.36□□□□□ -2.47
SIX2Q9NPC8 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.37□□□□□ -2.47
SIX2Q9NPC8 RNU6-320P-201ENST00000516511 106 ntBASIC-0.37□□□□□ -2.47
SIX2Q9NPC8 RNU6-656P-201ENST00000516785 107 ntBASIC-0.37□□□□□ -2.47
SIX2Q9NPC8 CYP3A54P-201ENST00000566950 75 ntBASIC-0.37□□□□□ -2.47
SIX2Q9NPC8 AC093726.3-201ENST00000637588 150 ntBASIC-0.37□□□□□ -2.47
SIX2Q9NPC8 RNU6-604P-201ENST00000390917 100 ntBASIC-0.38□□□□□ -2.47
SIX2Q9NPC8 SNORA26.2-201ENST00000390922 122 ntBASIC-0.38□□□□□ -2.47
SIX2Q9NPC8 RNY4P29-201ENST00000410801 97 ntBASIC-0.38□□□□□ -2.47
SIX2Q9NPC8 Z95118.1-201ENST00000421372 247 ntBASIC-0.38□□□□□ -2.47
SIX2Q9NPC8 MIR4493-201ENST00000584016 73 ntBASIC-0.38□□□□□ -2.47
SIX2Q9NPC8 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.39□□□□□ -2.47
SIX2Q9NPC8 RNU6-645P-201ENST00000364649 106 ntBASIC-0.39□□□□□ -2.47
SIX2Q9NPC8 MIR1255B2-201ENST00000408618 67 ntBASIC-0.39□□□□□ -2.47
SIX2Q9NPC8 MIR5704-201ENST00000584029 77 ntBASIC-0.39□□□□□ -2.47
SIX2Q9NPC8 MIR6851-201ENST00000617060 67 ntBASIC-0.39□□□□□ -2.47
SIX2Q9NPC8 MIR101-1-201ENST00000362265 75 ntBASIC-0.4□□□□□ -2.47
SIX2Q9NPC8 SNORD45.1-201ENST00000363181 77 ntBASIC-0.4□□□□□ -2.47
SIX2Q9NPC8 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.4□□□□□ -2.47
SIX2Q9NPC8 SCARNA18B-201ENST00000458806 135 ntBASIC-0.4□□□□□ -2.47
SIX2Q9NPC8 RNA5SP470-201ENST00000516463 106 ntBASIC-0.4□□□□□ -2.47
SIX2Q9NPC8 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.4□□□□□ -2.47
SIX2Q9NPC8 Y_RNA.388-201ENST00000383919 113 ntBASIC-0.41□□□□□ -2.48
SIX2Q9NPC8 MIR1265-201ENST00000408444 86 ntBASIC-0.41□□□□□ -2.48
SIX2Q9NPC8 MIR6854-201ENST00000614935 69 ntBASIC-0.41□□□□□ -2.48
SIX2Q9NPC8 SNORD14C-201ENST00000365382 88 ntBASIC-0.42□□□□□ -2.48
SIX2Q9NPC8 MIR1302-4-201ENST00000408701 150 ntBASIC-0.42□□□□□ -2.48
SIX2Q9NPC8 RNU6-758P-201ENST00000516292 89 ntBASIC-0.42□□□□□ -2.48
SIX2Q9NPC8 SNORD38.3-201ENST00000516599 73 ntBASIC-0.42□□□□□ -2.48
SIX2Q9NPC8 AL353803.5-201ENST00000599815 141 ntBASIC-0.42□□□□□ -2.48
SIX2Q9NPC8 MIR8064-201ENST00000612863 90 ntBASIC-0.42□□□□□ -2.48
SIX2Q9NPC8 MIR3202-2-201ENST00000635980 79 ntBASIC-0.42□□□□□ -2.48
SIX2Q9NPC8 RNA5SP275-201ENST00000363936 118 ntBASIC-0.43□□□□□ -2.48
SIX2Q9NPC8 RNA5SP173-201ENST00000364857 136 ntBASIC-0.43□□□□□ -2.48
SIX2Q9NPC8 MIR604-201ENST00000384880 94 ntBASIC-0.43□□□□□ -2.48
SIX2Q9NPC8 RNA5SP451-201ENST00000410588 110 ntBASIC-0.43□□□□□ -2.48
SIX2Q9NPC8 AC114755.3-201ENST00000481111 251 ntBASIC-0.43□□□□□ -2.48
SIX2Q9NPC8 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.43□□□□□ -2.48
SIX2Q9NPC8 MIR8068-201ENST00000618032 68 ntBASIC-0.43□□□□□ -2.48
SIX2Q9NPC8 MIR664A-201ENST00000626086 82 ntBASIC-0.43□□□□□ -2.48
SIX2Q9NPC8 SNORD115-22-201ENST00000364456 82 ntBASIC-0.44□□□□□ -2.48
SIX2Q9NPC8 SNORA62.4-201ENST00000365504 151 ntBASIC-0.44□□□□□ -2.48
SIX2Q9NPC8 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.44□□□□□ -2.48
SIX2Q9NPC8 SNORD126-201ENST00000459475 77 ntBASIC-0.44□□□□□ -2.48
SIX2Q9NPC8 MIR8053-201ENST00000613344 75 ntBASIC-0.44□□□□□ -2.48
SIX2Q9NPC8 MIR4679-1-201ENST00000637619 75 ntBASIC-0.44□□□□□ -2.48
SIX2Q9NPC8 RNU6-573P-201ENST00000383938 106 ntBASIC-0.45□□□□□ -2.48
SIX2Q9NPC8 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.45□□□□□ -2.48
SIX2Q9NPC8 MIR196A2-201ENST00000385189 110 ntBASIC-0.45□□□□□ -2.48
SIX2Q9NPC8 RNA5SP25-201ENST00000410815 110 ntBASIC-0.45□□□□□ -2.48
SIX2Q9NPC8 RNU7-154P-201ENST00000516194 62 ntBASIC-0.45□□□□□ -2.48
SIX2Q9NPC8 RNU6-982P-201ENST00000516216 102 ntBASIC-0.45□□□□□ -2.48
SIX2Q9NPC8 RNU6-881P-201ENST00000516813 102 ntBASIC-0.45□□□□□ -2.48
SIX2Q9NPC8 RNA5SP169-201ENST00000517268 117 ntBASIC-0.45□□□□□ -2.48
SIX2Q9NPC8 MIR6086-201ENST00000638065 55 ntBASIC-0.45□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 446.2 ms