Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.36□□□□□ -2.47
PAAF1Q9BRP4 AL445193.1-201ENST00000441183 141 ntBASIC-0.36□□□□□ -2.47
PAAF1Q9BRP4 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.36□□□□□ -2.47
PAAF1Q9BRP4 RNU7-171P-201ENST00000459581 62 ntBASIC-0.36□□□□□ -2.47
PAAF1Q9BRP4 RNU6-320P-201ENST00000516511 106 ntBASIC-0.36□□□□□ -2.47
PAAF1Q9BRP4 MIR4645-201ENST00000583158 77 ntBASIC-0.36□□□□□ -2.47
PAAF1Q9BRP4 AL590491.3-201ENST00000610731 82 ntBASIC-0.36□□□□□ -2.47
PAAF1Q9BRP4 MIR4788-201ENST00000639104 80 ntBASIC-0.36□□□□□ -2.47
PAAF1Q9BRP4 RNU6-1255P-201ENST00000363434 112 ntBASIC-0.37□□□□□ -2.47
PAAF1Q9BRP4 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.37□□□□□ -2.47
PAAF1Q9BRP4 RNA5SP395-201ENST00000516567 118 ntBASIC-0.37□□□□□ -2.47
PAAF1Q9BRP4 MIR3675-201ENST00000583661 73 ntBASIC-0.37□□□□□ -2.47
PAAF1Q9BRP4 MIR1297-201ENST00000637311 77 ntBASIC-0.37□□□□□ -2.47
PAAF1Q9BRP4 MIR4484-201ENST00000582855 83 ntBASIC-0.38□□□□□ -2.47
PAAF1Q9BRP4 SNORD114-11-201ENST00000363738 75 ntBASIC-0.39□□□□□ -2.47
PAAF1Q9BRP4 SNORA33.1-201ENST00000364957 130 ntBASIC-0.39□□□□□ -2.47
PAAF1Q9BRP4 SNORA8.1-201ENST00000384250 140 ntBASIC-0.39□□□□□ -2.47
PAAF1Q9BRP4 RNU7-55P-201ENST00000459426 62 ntBASIC-0.39□□□□□ -2.47
PAAF1Q9BRP4 RNA5SP66-201ENST00000517178 101 ntBASIC-0.39□□□□□ -2.47
PAAF1Q9BRP4 AL391099.1-201ENST00000624635 187 ntBASIC-0.39□□□□□ -2.47
PAAF1Q9BRP4 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.4□□□□□ -2.47
PAAF1Q9BRP4 RNU6-315P-201ENST00000362666 107 ntBASIC-0.4□□□□□ -2.47
PAAF1Q9BRP4 SNORD114-28-201ENST00000363610 72 ntBASIC-0.4□□□□□ -2.47
PAAF1Q9BRP4 RNA5SP275-201ENST00000363936 118 ntBASIC-0.4□□□□□ -2.47
PAAF1Q9BRP4 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.4□□□□□ -2.47
PAAF1Q9BRP4 MIRLET7B-201ENST00000385140 83 ntBASIC-0.4□□□□□ -2.47
PAAF1Q9BRP4 Y_RNA.43-201ENST00000362670 111 ntBASIC-0.41□□□□□ -2.48
PAAF1Q9BRP4 RNU6-973P-201ENST00000364690 107 ntBASIC-0.41□□□□□ -2.48
PAAF1Q9BRP4 MIR521-2-201ENST00000384818 87 ntBASIC-0.41□□□□□ -2.48
PAAF1Q9BRP4 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.41□□□□□ -2.48
PAAF1Q9BRP4 RNU6-337P-201ENST00000391243 106 ntBASIC-0.41□□□□□ -2.48
PAAF1Q9BRP4 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.41□□□□□ -2.48
PAAF1Q9BRP4 AC062037.1-201ENST00000605302 128 ntBASIC-0.41□□□□□ -2.48
PAAF1Q9BRP4 AC096531.1-201ENST00000419107 107 ntBASIC-0.42□□□□□ -2.48
PAAF1Q9BRP4 MIR1245B-201ENST00000636115 69 ntBASIC-0.42□□□□□ -2.48
PAAF1Q9BRP4 RNU6-330P-201ENST00000363015 107 ntBASIC-0.43□□□□□ -2.48
PAAF1Q9BRP4 SNORD73B-201ENST00000364394 72 ntBASIC-0.43□□□□□ -2.48
PAAF1Q9BRP4 AC074348.1-201ENST00000426503 132 ntBASIC-0.43□□□□□ -2.48
PAAF1Q9BRP4 MIR6739-201ENST00000622461 75 ntBASIC-0.43□□□□□ -2.48
PAAF1Q9BRP4 AC093726.3-201ENST00000637588 150 ntBASIC-0.43□□□□□ -2.48
PAAF1Q9BRP4 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.44□□□□□ -2.48
PAAF1Q9BRP4 SNORD126-201ENST00000459475 77 ntBASIC-0.44□□□□□ -2.48
PAAF1Q9BRP4 RNA5SP476-201ENST00000516613 103 ntBASIC-0.44□□□□□ -2.48
PAAF1Q9BRP4 MIR4432-201ENST00000581823 84 ntBASIC-0.44□□□□□ -2.48
PAAF1Q9BRP4 SNORD56B-201ENST00000384713 71 ntBASIC-0.45□□□□□ -2.48
PAAF1Q9BRP4 MIR196A2-201ENST00000385189 110 ntBASIC-0.45□□□□□ -2.48
PAAF1Q9BRP4 CYP3A54P-201ENST00000566950 75 ntBASIC-0.45□□□□□ -2.48
PAAF1Q9BRP4 MIR4493-201ENST00000584016 73 ntBASIC-0.45□□□□□ -2.48
PAAF1Q9BRP4 AP001180.6-201ENST00000584918 159 ntBASIC-0.45□□□□□ -2.48
PAAF1Q9BRP4 SNORD45.1-201ENST00000363181 77 ntBASIC-0.46□□□□□ -2.48
PAAF1Q9BRP4 SNORD14C-201ENST00000365382 88 ntBASIC-0.46□□□□□ -2.48
PAAF1Q9BRP4 MIR548AZ-201ENST00000616567 95 ntBASIC-0.46□□□□□ -2.48
PAAF1Q9BRP4 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.47□□□□□ -2.48
PAAF1Q9BRP4 MIR204-201ENST00000385200 110 ntBASIC-0.47□□□□□ -2.48
PAAF1Q9BRP4 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.47□□□□□ -2.48
PAAF1Q9BRP4 SNORA26.2-201ENST00000390922 122 ntBASIC-0.47□□□□□ -2.48
PAAF1Q9BRP4 AC114755.3-201ENST00000481111 251 ntBASIC-0.47□□□□□ -2.48
PAAF1Q9BRP4 RNA5SP169-201ENST00000517268 117 ntBASIC-0.47□□□□□ -2.48
PAAF1Q9BRP4 AC090617.8-201ENST00000623339 167 ntBASIC-0.47□□□□□ -2.48
PAAF1Q9BRP4 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.48□□□□□ -2.49
PAAF1Q9BRP4 SNORD75.1-201ENST00000408373 60 ntBASIC-0.48□□□□□ -2.49
PAAF1Q9BRP4 MIR1255B2-201ENST00000408618 67 ntBASIC-0.48□□□□□ -2.49
PAAF1Q9BRP4 MIR4666B-201ENST00000578142 81 ntBASIC-0.48□□□□□ -2.49
PAAF1Q9BRP4 MIR4280-201ENST00000582178 76 ntBASIC-0.48□□□□□ -2.49
PAAF1Q9BRP4 MIR4712-201ENST00000583750 82 ntBASIC-0.48□□□□□ -2.49
PAAF1Q9BRP4 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.49□□□□□ -2.49
PAAF1Q9BRP4 RNU6-284P-201ENST00000411105 106 ntBASIC-0.49□□□□□ -2.49
PAAF1Q9BRP4 RNA5SP470-201ENST00000516463 106 ntBASIC-0.49□□□□□ -2.49
PAAF1Q9BRP4 MIR3681-201ENST00000580089 72 ntBASIC-0.49□□□□□ -2.49
PAAF1Q9BRP4 RNU6-604P-201ENST00000390917 100 ntBASIC-0.5□□□□□ -2.49
PAAF1Q9BRP4 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.5□□□□□ -2.49
PAAF1Q9BRP4 RNU6-645P-201ENST00000364649 106 ntBASIC-0.51□□□□□ -2.49
PAAF1Q9BRP4 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.51□□□□□ -2.49
PAAF1Q9BRP4 RNA5SP451-201ENST00000410588 110 ntBASIC-0.51□□□□□ -2.49
PAAF1Q9BRP4 RNY4P29-201ENST00000410801 97 ntBASIC-0.51□□□□□ -2.49
PAAF1Q9BRP4 RPS29P8-201ENST00000445109 171 ntBASIC-0.51□□□□□ -2.49
PAAF1Q9BRP4 MIR5704-201ENST00000584029 77 ntBASIC-0.51□□□□□ -2.49
PAAF1Q9BRP4 MIR6854-201ENST00000614935 69 ntBASIC-0.51□□□□□ -2.49
PAAF1Q9BRP4 MIR101-1-201ENST00000362265 75 ntBASIC-0.52□□□□□ -2.49
PAAF1Q9BRP4 MIR548C-201ENST00000384815 97 ntBASIC-0.52□□□□□ -2.49
PAAF1Q9BRP4 SNORD38.3-201ENST00000516599 73 ntBASIC-0.52□□□□□ -2.49
PAAF1Q9BRP4 SNORD115-23-201ENST00000364461 82 ntBASIC-0.53□□□□□ -2.49
PAAF1Q9BRP4 SNORA32.3-201ENST00000384772 121 ntBASIC-0.53□□□□□ -2.49
PAAF1Q9BRP4 RNU6-656P-201ENST00000516785 107 ntBASIC-0.53□□□□□ -2.49
PAAF1Q9BRP4 MIR6851-201ENST00000617060 67 ntBASIC-0.53□□□□□ -2.49
PAAF1Q9BRP4 MIR6086-201ENST00000638065 55 ntBASIC-0.53□□□□□ -2.49
PAAF1Q9BRP4 SNORA62.4-201ENST00000365504 151 ntBASIC-0.54□□□□□ -2.5
PAAF1Q9BRP4 AL353803.5-201ENST00000599815 141 ntBASIC-0.54□□□□□ -2.5
PAAF1Q9BRP4 MIR4436A-201ENST00000585278 85 ntBASIC-0.55□□□□□ -2.5
PAAF1Q9BRP4 MIR8053-201ENST00000613344 75 ntBASIC-0.55□□□□□ -2.5
PAAF1Q9BRP4 MIR3202-2-201ENST00000635980 79 ntBASIC-0.55□□□□□ -2.5
PAAF1Q9BRP4 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.56□□□□□ -2.5
PAAF1Q9BRP4 RNA5SP173-201ENST00000364857 136 ntBASIC-0.56□□□□□ -2.5
PAAF1Q9BRP4 Z95118.1-201ENST00000421372 247 ntBASIC-0.56□□□□□ -2.5
PAAF1Q9BRP4 RNU6-518P-201ENST00000516056 96 ntBASIC-0.56□□□□□ -2.5
PAAF1Q9BRP4 MIR8068-201ENST00000618032 68 ntBASIC-0.56□□□□□ -2.5
PAAF1Q9BRP4 SNORA3B-201ENST00000391305 131 ntBASIC-0.57□□□□□ -2.5
PAAF1Q9BRP4 MIR1265-201ENST00000408444 86 ntBASIC-0.57□□□□□ -2.5
PAAF1Q9BRP4 SCARNA18B-201ENST00000458806 135 ntBASIC-0.57□□□□□ -2.5
PAAF1Q9BRP4 RNU6-70P-201ENST00000516438 60 ntBASIC-0.57□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms