Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.09□□□□□ -2.42
CDX4O14627 RNU6-752P-201ENST00000516376 102 ntBASIC-0.09□□□□□ -2.42
CDX4O14627 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.09□□□□□ -2.42
CDX4O14627 MIR655-201ENST00000362159 97 ntBASIC-0.1□□□□□ -2.43
CDX4O14627 SNORA32.1-201ENST00000364514 115 ntBASIC-0.1□□□□□ -2.43
CDX4O14627 RNA5SP173-201ENST00000364857 136 ntBASIC-0.1□□□□□ -2.43
CDX4O14627 SNORD114-12-201ENST00000365400 75 ntBASIC-0.1□□□□□ -2.43
CDX4O14627 AC074348.1-201ENST00000426503 132 ntBASIC-0.1□□□□□ -2.43
CDX4O14627 MIR4666B-201ENST00000578142 81 ntBASIC-0.1□□□□□ -2.43
CDX4O14627 MIR1245B-201ENST00000636115 69 ntBASIC-0.1□□□□□ -2.43
CDX4O14627 RNU6-502P-201ENST00000362419 108 ntBASIC-0.11□□□□□ -2.43
CDX4O14627 RNU6-315P-201ENST00000362666 107 ntBASIC-0.11□□□□□ -2.43
CDX4O14627 RNA5SP368-201ENST00000364298 116 ntBASIC-0.11□□□□□ -2.43
CDX4O14627 SNORD49B-201ENST00000365172 72 ntBASIC-0.11□□□□□ -2.43
CDX4O14627 RNU6-30P-201ENST00000384561 107 ntBASIC-0.11□□□□□ -2.43
CDX4O14627 RNU6-455P-201ENST00000384681 107 ntBASIC-0.11□□□□□ -2.43
CDX4O14627 MIR4712-201ENST00000583750 82 ntBASIC-0.11□□□□□ -2.43
CDX4O14627 U6.96-201ENST00000636425 70 ntBASIC-0.11□□□□□ -2.43
CDX4O14627 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.12□□□□□ -2.43
CDX4O14627 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.12□□□□□ -2.43
CDX4O14627 SNORD114-15-201ENST00000364687 72 ntBASIC-0.12□□□□□ -2.43
CDX4O14627 SNORA33.1-201ENST00000364957 130 ntBASIC-0.12□□□□□ -2.43
CDX4O14627 MIR9-2-201ENST00000384838 87 ntBASIC-0.12□□□□□ -2.43
CDX4O14627 MIR214-201ENST00000385214 110 ntBASIC-0.12□□□□□ -2.43
CDX4O14627 RNU6-337P-201ENST00000391243 106 ntBASIC-0.12□□□□□ -2.43
CDX4O14627 MIR3675-201ENST00000583661 73 ntBASIC-0.12□□□□□ -2.43
CDX4O14627 MIR6773-201ENST00000612812 74 ntBASIC-0.12□□□□□ -2.43
CDX4O14627 MIR8064-201ENST00000612863 90 ntBASIC-0.12□□□□□ -2.43
CDX4O14627 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.13□□□□□ -2.43
CDX4O14627 SNORA8.1-201ENST00000384250 140 ntBASIC-0.13□□□□□ -2.43
CDX4O14627 RNU6-380P-201ENST00000410207 107 ntBASIC-0.13□□□□□ -2.43
CDX4O14627 RNU6-807P-201ENST00000516805 107 ntBASIC-0.13□□□□□ -2.43
CDX4O14627 MIR4645-201ENST00000583158 77 ntBASIC-0.13□□□□□ -2.43
CDX4O14627 uc_338.36-201ENST00000622331 158 ntBASIC-0.13□□□□□ -2.43
CDX4O14627 AC090617.8-201ENST00000623339 167 ntBASIC-0.13□□□□□ -2.43
CDX4O14627 SNORA18.1-201ENST00000363418 128 ntBASIC-0.14□□□□□ -2.43
CDX4O14627 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.14□□□□□ -2.43
CDX4O14627 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.14□□□□□ -2.43
CDX4O14627 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.14□□□□□ -2.43
CDX4O14627 MIR604-201ENST00000384880 94 ntBASIC-0.14□□□□□ -2.43
CDX4O14627 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.14□□□□□ -2.43
CDX4O14627 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.14□□□□□ -2.43
CDX4O14627 MIR1297-201ENST00000637311 77 ntBASIC-0.14□□□□□ -2.43
CDX4O14627 RNU6-900P-201ENST00000384498 102 ntBASIC-0.15□□□□□ -2.43
CDX4O14627 SCARNA18B-201ENST00000458806 135 ntBASIC-0.15□□□□□ -2.43
CDX4O14627 SNORD4A-201ENST00000459174 72 ntBASIC-0.15□□□□□ -2.43
CDX4O14627 MIR664A-201ENST00000626086 82 ntBASIC-0.15□□□□□ -2.43
CDX4O14627 SNORD45.1-201ENST00000363181 77 ntBASIC-0.16□□□□□ -2.44
CDX4O14627 SNORD95.1-201ENST00000364099 68 ntBASIC-0.16□□□□□ -2.44
CDX4O14627 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.16□□□□□ -2.44
CDX4O14627 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.16□□□□□ -2.44
CDX4O14627 MIR521-2-201ENST00000384818 87 ntBASIC-0.16□□□□□ -2.44
CDX4O14627 MIRLET7B-201ENST00000385140 83 ntBASIC-0.16□□□□□ -2.44
CDX4O14627 MIR6739-201ENST00000622461 75 ntBASIC-0.16□□□□□ -2.44
CDX4O14627 MIR101-1-201ENST00000362265 75 ntBASIC-0.17□□□□□ -2.44
CDX4O14627 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.17□□□□□ -2.44
CDX4O14627 RNU6-604P-201ENST00000390917 100 ntBASIC-0.17□□□□□ -2.44
CDX4O14627 MIR1302-4-201ENST00000408701 150 ntBASIC-0.17□□□□□ -2.44
CDX4O14627 RNU7-55P-201ENST00000459426 62 ntBASIC-0.17□□□□□ -2.44
CDX4O14627 RNA5SP67-201ENST00000516422 131 ntBASIC-0.17□□□□□ -2.44
CDX4O14627 AC108676.2-201ENST00000605225 163 ntBASIC-0.17□□□□□ -2.44
CDX4O14627 RNU6-228P-201ENST00000362700 106 ntBASIC-0.18□□□□□ -2.44
CDX4O14627 SNORD114-28-201ENST00000363610 72 ntBASIC-0.18□□□□□ -2.44
CDX4O14627 RNU6-901P-201ENST00000384593 106 ntBASIC-0.18□□□□□ -2.44
CDX4O14627 SNORD56B-201ENST00000384713 71 ntBASIC-0.18□□□□□ -2.44
CDX4O14627 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.18□□□□□ -2.44
CDX4O14627 MIR1255A-201ENST00000408338 113 ntBASIC-0.18□□□□□ -2.44
CDX4O14627 AL445193.1-201ENST00000441183 141 ntBASIC-0.18□□□□□ -2.44
CDX4O14627 RNU6-656P-201ENST00000516785 107 ntBASIC-0.18□□□□□ -2.44
CDX4O14627 CYP3A54P-201ENST00000566950 75 ntBASIC-0.18□□□□□ -2.44
CDX4O14627 AL590491.3-201ENST00000610731 82 ntBASIC-0.18□□□□□ -2.44
CDX4O14627 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.18□□□□□ -2.44
CDX4O14627 AL391099.1-201ENST00000624635 187 ntBASIC-0.18□□□□□ -2.44
CDX4O14627 MIR3202-2-201ENST00000635980 79 ntBASIC-0.18□□□□□ -2.44
CDX4O14627 RNU6-645P-201ENST00000364649 106 ntBASIC-0.19□□□□□ -2.44
CDX4O14627 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.19□□□□□ -2.44
CDX4O14627 RNU6-982P-201ENST00000516216 102 ntBASIC-0.19□□□□□ -2.44
CDX4O14627 MIR3666-201ENST00000607845 111 ntBASIC-0.19□□□□□ -2.44
CDX4O14627 RNU6-973P-201ENST00000364690 107 ntBASIC-0.2□□□□□ -2.44
CDX4O14627 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.2□□□□□ -2.44
CDX4O14627 MIR1255B2-201ENST00000408618 67 ntBASIC-0.2□□□□□ -2.44
CDX4O14627 MIR5704-201ENST00000584029 77 ntBASIC-0.2□□□□□ -2.44
CDX4O14627 MIR4263-201ENST00000584745 83 ntBASIC-0.2□□□□□ -2.44
CDX4O14627 snoR1.1-201ENST00000628177 80 ntBASIC-0.2□□□□□ -2.44
CDX4O14627 MIR4788-201ENST00000639104 80 ntBASIC-0.2□□□□□ -2.44
CDX4O14627 SNORD115-22-201ENST00000364456 82 ntBASIC-0.21□□□□□ -2.44
CDX4O14627 SNORD115-23-201ENST00000364461 82 ntBASIC-0.21□□□□□ -2.44
CDX4O14627 RNA5SP300-201ENST00000391197 107 ntBASIC-0.21□□□□□ -2.44
CDX4O14627 RPS29P8-201ENST00000445109 171 ntBASIC-0.21□□□□□ -2.44
CDX4O14627 RNU6-70P-201ENST00000516438 60 ntBASIC-0.21□□□□□ -2.44
CDX4O14627 RNU6-881P-201ENST00000516813 102 ntBASIC-0.21□□□□□ -2.44
CDX4O14627 MIR4280-201ENST00000582178 76 ntBASIC-0.21□□□□□ -2.44
CDX4O14627 RNA5SP331-201ENST00000364986 107 ntBASIC-0.22□□□□□ -2.44
CDX4O14627 MIR224-201ENST00000384889 81 ntBASIC-0.22□□□□□ -2.44
CDX4O14627 SNORD78.1-201ENST00000390866 65 ntBASIC-0.22□□□□□ -2.44
CDX4O14627 RNA5SP451-201ENST00000410588 110 ntBASIC-0.22□□□□□ -2.44
CDX4O14627 SNORD57-201ENST00000448188 72 ntBASIC-0.22□□□□□ -2.44
CDX4O14627 RNA5SP66-201ENST00000517178 101 ntBASIC-0.22□□□□□ -2.44
CDX4O14627 MIR3134-201ENST00000579433 74 ntBASIC-0.22□□□□□ -2.44
CDX4O14627 MIR4432-201ENST00000581823 84 ntBASIC-0.22□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 328 ms