Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC28.25■■■□□ 2.11
Rtl1Q7M732 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC28.25■■■□□ 2.11
Rtl1Q7M732 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Rtl1Q7M732 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
Rtl1Q7M732 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
Rtl1Q7M732 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Rtl1Q7M732 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Rtl1Q7M732 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Rtl1Q7M732 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Rtl1Q7M732 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC28.24■■■□□ 2.11
Rtl1Q7M732 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Rtl1Q7M732 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
Rtl1Q7M732 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Rtl1Q7M732 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
Rtl1Q7M732 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC28.24■■■□□ 2.11
Rtl1Q7M732 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Rtl1Q7M732 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Rtl1Q7M732 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Rtl1Q7M732 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC28.24■■■□□ 2.11
Rtl1Q7M732 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Rtl1Q7M732 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
Rtl1Q7M732 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC28.24■■■□□ 2.11
Rtl1Q7M732 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Rtl1Q7M732 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
Rtl1Q7M732 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Rtl1Q7M732 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Rtl1Q7M732 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
Rtl1Q7M732 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
Rtl1Q7M732 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Rtl1Q7M732 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC28.23■■■□□ 2.11
Rtl1Q7M732 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Rtl1Q7M732 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Rtl1Q7M732 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
Rtl1Q7M732 Prkcz2-201ENSMUST00000206136 1756 ntBASIC28.23■■■□□ 2.11
Rtl1Q7M732 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Rtl1Q7M732 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC28.23■■■□□ 2.11
Rtl1Q7M732 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
Rtl1Q7M732 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC28.23■■■□□ 2.11
Rtl1Q7M732 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Rtl1Q7M732 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Rtl1Q7M732 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Rtl1Q7M732 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
Rtl1Q7M732 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Rtl1Q7M732 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
Rtl1Q7M732 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Rtl1Q7M732 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC28.22■■■□□ 2.11
Rtl1Q7M732 Gm19164-201ENSMUST00000210667 640 ntBASIC28.22■■■□□ 2.11
Rtl1Q7M732 Gm7229-201ENSMUST00000214719 1007 ntBASIC28.22■■■□□ 2.11
Rtl1Q7M732 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Rtl1Q7M732 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
Rtl1Q7M732 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Rtl1Q7M732 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Rtl1Q7M732 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
Rtl1Q7M732 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
Rtl1Q7M732 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Rtl1Q7M732 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC28.21■■■□□ 2.11
Rtl1Q7M732 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Rtl1Q7M732 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Rtl1Q7M732 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Rtl1Q7M732 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Rtl1Q7M732 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
Rtl1Q7M732 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Rtl1Q7M732 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC28.21■■■□□ 2.11
Rtl1Q7M732 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Rtl1Q7M732 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Rtl1Q7M732 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Rtl1Q7M732 Gm7669-201ENSMUST00000210184 1603 ntBASIC28.21■■■□□ 2.11
Rtl1Q7M732 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
Rtl1Q7M732 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
Rtl1Q7M732 Dancr-204ENSMUST00000132389 2347 ntBASIC28.21■■■□□ 2.11
Rtl1Q7M732 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
Rtl1Q7M732 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
Rtl1Q7M732 Gm15467-201ENSMUST00000120582 445 ntBASIC28.21■■■□□ 2.11
Rtl1Q7M732 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC28.21■■■□□ 2.11
Rtl1Q7M732 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC28.21■■■□□ 2.11
Rtl1Q7M732 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Rtl1Q7M732 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.11
Rtl1Q7M732 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Rtl1Q7M732 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Rtl1Q7M732 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Rtl1Q7M732 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
Rtl1Q7M732 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Rtl1Q7M732 Gm27702-201ENSMUST00000184512 56 ntBASIC28.2■■■□□ 2.1
Rtl1Q7M732 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC28.2■■■□□ 2.1
Rtl1Q7M732 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Rtl1Q7M732 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Rtl1Q7M732 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Rtl1Q7M732 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC28.2■■■□□ 2.1
Rtl1Q7M732 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.1
Rtl1Q7M732 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC28.2■■■□□ 2.1
Rtl1Q7M732 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC28.2■■■□□ 2.1
Rtl1Q7M732 Gm44616-201ENSMUST00000206417 1732 ntBASIC28.2■■■□□ 2.1
Rtl1Q7M732 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Rtl1Q7M732 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Rtl1Q7M732 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
Rtl1Q7M732 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC28.19■■■□□ 2.1
Rtl1Q7M732 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC28.19■■■□□ 2.1
Rtl1Q7M732 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Rtl1Q7M732 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Rtl1Q7M732 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Retrieved 100 of 76,532 protein–RNA pairs in 123.5 ms