Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC20.58■□□□□ 0.89
Uspl1Q3ULM6 Gm7153-201ENSMUST00000117092 455 ntBASIC20.58■□□□□ 0.89
Uspl1Q3ULM6 Gm8097-201ENSMUST00000117903 829 ntBASIC20.58■□□□□ 0.89
Uspl1Q3ULM6 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Uspl1Q3ULM6 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC20.58■□□□□ 0.89
Uspl1Q3ULM6 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Uspl1Q3ULM6 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Uspl1Q3ULM6 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Uspl1Q3ULM6 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Uspl1Q3ULM6 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Uspl1Q3ULM6 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC20.58■□□□□ 0.88
Uspl1Q3ULM6 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Uspl1Q3ULM6 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Uspl1Q3ULM6 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Uspl1Q3ULM6 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Uspl1Q3ULM6 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC20.57■□□□□ 0.88
Uspl1Q3ULM6 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Uspl1Q3ULM6 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Uspl1Q3ULM6 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Uspl1Q3ULM6 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Uspl1Q3ULM6 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Uspl1Q3ULM6 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Uspl1Q3ULM6 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC20.57■□□□□ 0.88
Uspl1Q3ULM6 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Uspl1Q3ULM6 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC20.57■□□□□ 0.88
Uspl1Q3ULM6 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC20.57■□□□□ 0.88
Uspl1Q3ULM6 AC127302.2-201ENSMUST00000215212 268 ntBASIC20.57■□□□□ 0.88
Uspl1Q3ULM6 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC20.57■□□□□ 0.88
Uspl1Q3ULM6 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Uspl1Q3ULM6 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Uspl1Q3ULM6 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Uspl1Q3ULM6 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Uspl1Q3ULM6 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Uspl1Q3ULM6 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Uspl1Q3ULM6 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Uspl1Q3ULM6 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Uspl1Q3ULM6 Gm11780-201ENSMUST00000136880 516 ntBASIC20.56■□□□□ 0.88
Uspl1Q3ULM6 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Uspl1Q3ULM6 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC20.56■□□□□ 0.88
Uspl1Q3ULM6 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Uspl1Q3ULM6 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Uspl1Q3ULM6 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Uspl1Q3ULM6 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Uspl1Q3ULM6 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Uspl1Q3ULM6 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Uspl1Q3ULM6 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Uspl1Q3ULM6 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Uspl1Q3ULM6 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Uspl1Q3ULM6 Ccdc166-201ENSMUST00000182172 2584 ntBASIC20.55■□□□□ 0.88
Uspl1Q3ULM6 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Uspl1Q3ULM6 App-207ENSMUST00000227737 2827 ntBASIC20.55■□□□□ 0.88
Uspl1Q3ULM6 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC20.55■□□□□ 0.88
Uspl1Q3ULM6 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Uspl1Q3ULM6 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Uspl1Q3ULM6 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Uspl1Q3ULM6 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Uspl1Q3ULM6 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Uspl1Q3ULM6 Gm37584-201ENSMUST00000193595 1290 ntBASIC20.55■□□□□ 0.88
Uspl1Q3ULM6 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Uspl1Q3ULM6 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Uspl1Q3ULM6 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Uspl1Q3ULM6 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Uspl1Q3ULM6 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Uspl1Q3ULM6 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Uspl1Q3ULM6 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Uspl1Q3ULM6 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Uspl1Q3ULM6 AC133083.1-201ENSMUST00000221736 2209 ntBASIC20.54■□□□□ 0.88
Uspl1Q3ULM6 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Uspl1Q3ULM6 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC20.54■□□□□ 0.88
Uspl1Q3ULM6 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC20.54■□□□□ 0.88
Uspl1Q3ULM6 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Uspl1Q3ULM6 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Uspl1Q3ULM6 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Uspl1Q3ULM6 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Uspl1Q3ULM6 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Uspl1Q3ULM6 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Uspl1Q3ULM6 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC20.54■□□□□ 0.88
Uspl1Q3ULM6 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Uspl1Q3ULM6 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC20.54■□□□□ 0.88
Uspl1Q3ULM6 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Uspl1Q3ULM6 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Uspl1Q3ULM6 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Uspl1Q3ULM6 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Uspl1Q3ULM6 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC20.54■□□□□ 0.88
Uspl1Q3ULM6 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Uspl1Q3ULM6 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Uspl1Q3ULM6 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Uspl1Q3ULM6 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Uspl1Q3ULM6 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Uspl1Q3ULM6 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Uspl1Q3ULM6 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Uspl1Q3ULM6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Uspl1Q3ULM6 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Uspl1Q3ULM6 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Uspl1Q3ULM6 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Uspl1Q3ULM6 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Uspl1Q3ULM6 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Uspl1Q3ULM6 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC20.53■□□□□ 0.88
Uspl1Q3ULM6 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Uspl1Q3ULM6 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms