Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 snoU13.13-201ENST00000458842 104 ntBASIC0.74□□□□□ -2.29
PCDHA4Q9UN74 snoU13.18-201ENST00000459483 104 ntBASIC0.74□□□□□ -2.29
PCDHA4Q9UN74 Y_RNA.118-201ENST00000363300 101 ntBASIC0.73□□□□□ -2.29
PCDHA4Q9UN74 Y_RNA.443-201ENST00000384135 111 ntBASIC0.73□□□□□ -2.29
PCDHA4Q9UN74 RNU6-630P-201ENST00000391258 106 ntBASIC0.73□□□□□ -2.29
PCDHA4Q9UN74 MIR548E-201ENST00000408287 88 ntBASIC0.73□□□□□ -2.29
PCDHA4Q9UN74 AC021146.9-201ENST00000512503 156 ntBASIC0.73□□□□□ -2.29
PCDHA4Q9UN74 MIR4714-201ENST00000580728 77 ntBASIC0.73□□□□□ -2.29
PCDHA4Q9UN74 MIR151B-201ENST00000584249 96 ntBASIC0.73□□□□□ -2.29
PCDHA4Q9UN74 SNORA63.6-201ENST00000364921 119 ntBASIC0.72□□□□□ -2.29
PCDHA4Q9UN74 Y_RNA.633-201ENST00000459107 95 ntBASIC0.72□□□□□ -2.29
PCDHA4Q9UN74 RNU6-656P-201ENST00000516785 107 ntBASIC0.72□□□□□ -2.29
PCDHA4Q9UN74 AC005520.4-201ENST00000604337 90 ntBASIC0.72□□□□□ -2.29
PCDHA4Q9UN74 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.72□□□□□ -2.29
PCDHA4Q9UN74 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.72□□□□□ -2.29
PCDHA4Q9UN74 RNU6-863P-201ENST00000515989 104 ntBASIC0.71□□□□□ -2.3
PCDHA4Q9UN74 SNORD44.1-201ENST00000363202 61 ntBASIC0.7□□□□□ -2.3
PCDHA4Q9UN74 SNORA25.4-201ENST00000363666 124 ntBASIC0.7□□□□□ -2.3
PCDHA4Q9UN74 RNU6-668P-201ENST00000364180 107 ntBASIC0.7□□□□□ -2.3
PCDHA4Q9UN74 Y_RNA.355-201ENST00000365462 98 ntBASIC0.7□□□□□ -2.3
PCDHA4Q9UN74 RNU6-1162P-201ENST00000384443 104 ntBASIC0.7□□□□□ -2.3
PCDHA4Q9UN74 MIR521-2-201ENST00000384818 87 ntBASIC0.7□□□□□ -2.3
PCDHA4Q9UN74 MIR501-201ENST00000390204 84 ntBASIC0.7□□□□□ -2.3
PCDHA4Q9UN74 MIR760-201ENST00000390220 80 ntBASIC0.7□□□□□ -2.3
PCDHA4Q9UN74 MIR20A-201ENST00000362279 71 ntBASIC0.69□□□□□ -2.3
PCDHA4Q9UN74 SNORA15B-2-201ENST00000384058 135 ntBASIC0.69□□□□□ -2.3
PCDHA4Q9UN74 SNORA15B-1-201ENST00000384334 135 ntBASIC0.69□□□□□ -2.3
PCDHA4Q9UN74 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.69□□□□□ -2.3
PCDHA4Q9UN74 AC244090.1-201ENST00000441884 93 ntBASIC0.69□□□□□ -2.3
PCDHA4Q9UN74 RNU6-1223P-201ENST00000517124 104 ntBASIC0.69□□□□□ -2.3
PCDHA4Q9UN74 MIR4677-201ENST00000584153 80 ntBASIC0.69□□□□□ -2.3
PCDHA4Q9UN74 MIR516B1-201ENST00000385211 90 ntBASIC0.68□□□□□ -2.3
PCDHA4Q9UN74 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
PCDHA4Q9UN74 MIR548AD-201ENST00000584780 82 ntBASIC0.68□□□□□ -2.3
PCDHA4Q9UN74 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
PCDHA4Q9UN74 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
PCDHA4Q9UN74 SNORD114-29-201ENST00000364819 70 ntBASIC0.66□□□□□ -2.3
PCDHA4Q9UN74 RNA5SP128-201ENST00000365305 116 ntBASIC0.66□□□□□ -2.3
PCDHA4Q9UN74 MIR5000-201ENST00000577717 103 ntBASIC0.66□□□□□ -2.3
PCDHA4Q9UN74 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.65□□□□□ -2.31
PCDHA4Q9UN74 SNORA68.3-201ENST00000515906 83 ntBASIC0.65□□□□□ -2.31
PCDHA4Q9UN74 RNA5SP121-201ENST00000516537 101 ntBASIC0.65□□□□□ -2.31
PCDHA4Q9UN74 RNU7-188P-201ENST00000517063 64 ntBASIC0.65□□□□□ -2.31
PCDHA4Q9UN74 AL109933.3-201ENST00000619095 188 ntBASIC0.65□□□□□ -2.31
PCDHA4Q9UN74 RNU6-471P-201ENST00000383944 106 ntBASIC0.64□□□□□ -2.31
PCDHA4Q9UN74 MIR92A1-201ENST00000385233 78 ntBASIC0.64□□□□□ -2.31
PCDHA4Q9UN74 AC125388.1-201ENST00000459631 156 ntBASIC0.64□□□□□ -2.31
PCDHA4Q9UN74 RNA5SP499-201ENST00000363982 119 ntBASIC0.63□□□□□ -2.31
PCDHA4Q9UN74 SNORA33.1-201ENST00000364957 130 ntBASIC0.63□□□□□ -2.31
PCDHA4Q9UN74 Y_RNA.340-201ENST00000365330 92 ntBASIC0.63□□□□□ -2.31
PCDHA4Q9UN74 MIR1265-201ENST00000408444 86 ntBASIC0.63□□□□□ -2.31
PCDHA4Q9UN74 AL157398.1-201ENST00000452981 186 ntBASIC0.63□□□□□ -2.31
PCDHA4Q9UN74 Y_RNA.375-201ENST00000365625 101 ntBASIC0.62□□□□□ -2.31
PCDHA4Q9UN74 RNU6-1089P-201ENST00000516473 104 ntBASIC0.62□□□□□ -2.31
PCDHA4Q9UN74 MIR6515-201ENST00000619843 57 ntBASIC0.62□□□□□ -2.31
PCDHA4Q9UN74 AC084368.1-201ENST00000620935 65 ntBASIC0.62□□□□□ -2.31
PCDHA4Q9UN74 MIR499B-201ENST00000636498 73 ntBASIC0.62□□□□□ -2.31
PCDHA4Q9UN74 MIR103A1-201ENST00000362165 78 ntBASIC0.61□□□□□ -2.31
PCDHA4Q9UN74 MIRLET7D-201ENST00000362263 87 ntBASIC0.6□□□□□ -2.31
PCDHA4Q9UN74 SNORD2-201ENST00000459163 69 ntBASIC0.6□□□□□ -2.31
PCDHA4Q9UN74 RNU7-129P-201ENST00000516128 62 ntBASIC0.6□□□□□ -2.31
PCDHA4Q9UN74 RNU6-175P-201ENST00000516896 107 ntBASIC0.6□□□□□ -2.31
PCDHA4Q9UN74 RNA5SP215-201ENST00000363440 122 ntBASIC0.59□□□□□ -2.31
PCDHA4Q9UN74 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.59□□□□□ -2.31
PCDHA4Q9UN74 MIR3925-201ENST00000584674 77 ntBASIC0.59□□□□□ -2.31
PCDHA4Q9UN74 Y_RNA.205-201ENST00000364128 113 ntBASIC0.58□□□□□ -2.32
PCDHA4Q9UN74 MIR876-201ENST00000401147 81 ntBASIC0.58□□□□□ -2.32
PCDHA4Q9UN74 RNU6-542P-201ENST00000516405 103 ntBASIC0.58□□□□□ -2.32
PCDHA4Q9UN74 MIR4511-201ENST00000582784 87 ntBASIC0.58□□□□□ -2.32
PCDHA4Q9UN74 AC243829.6-201ENST00000612652 106 ntBASIC0.58□□□□□ -2.32
PCDHA4Q9UN74 AC022709.1-201ENST00000615967 87 ntBASIC0.58□□□□□ -2.32
PCDHA4Q9UN74 MIR7111-201ENST00000619751 72 ntBASIC0.58□□□□□ -2.32
PCDHA4Q9UN74 AC103706.3-201ENST00000636297 85 ntBASIC0.58□□□□□ -2.32
PCDHA4Q9UN74 SNORA9.1-201ENST00000362412 131 ntBASIC0.57□□□□□ -2.32
PCDHA4Q9UN74 U6.96-201ENST00000636425 70 ntBASIC0.57□□□□□ -2.32
PCDHA4Q9UN74 RNA5SP347-201ENST00000362445 119 ntBASIC0.56□□□□□ -2.32
PCDHA4Q9UN74 MIR489-201ENST00000384923 84 ntBASIC0.56□□□□□ -2.32
PCDHA4Q9UN74 SNORA49-201ENST00000386157 136 ntBASIC0.56□□□□□ -2.32
PCDHA4Q9UN74 RN7SL660P-201ENST00000614852 299 ntBASIC0.56□□□□□ -2.32
PCDHA4Q9UN74 MIR598-201ENST00000384868 97 ntBASIC0.55□□□□□ -2.32
PCDHA4Q9UN74 MIR216A-201ENST00000385063 110 ntBASIC0.55□□□□□ -2.32
PCDHA4Q9UN74 U2.7-201ENST00000619197 100 ntBASIC0.55□□□□□ -2.32
PCDHA4Q9UN74 MIR6513-201ENST00000621188 64 ntBASIC0.54□□□□□ -2.32
PCDHA4Q9UN74 RNU6-815P-201ENST00000384080 113 ntBASIC0.53□□□□□ -2.32
PCDHA4Q9UN74 MIR548C-201ENST00000384815 97 ntBASIC0.53□□□□□ -2.32
PCDHA4Q9UN74 RNA5SP299-201ENST00000391203 116 ntBASIC0.53□□□□□ -2.32
PCDHA4Q9UN74 uc_338.17-201ENST00000619633 179 ntBASIC0.53□□□□□ -2.32
PCDHA4Q9UN74 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.32
PCDHA4Q9UN74 SNORA75.1-201ENST00000391130 148 ntBASIC0.52□□□□□ -2.33
PCDHA4Q9UN74 SCARNA11.2-201ENST00000517183 154 ntBASIC0.52□□□□□ -2.33
PCDHA4Q9UN74 CYP3A54P-201ENST00000566950 75 ntBASIC0.52□□□□□ -2.33
PCDHA4Q9UN74 AC090617.8-201ENST00000623339 167 ntBASIC0.52□□□□□ -2.33
PCDHA4Q9UN74 RNA5SP62-201ENST00000363457 110 ntBASIC0.51□□□□□ -2.33
PCDHA4Q9UN74 RNU6-1036P-201ENST00000383959 104 ntBASIC0.51□□□□□ -2.33
PCDHA4Q9UN74 RNU6-127P-201ENST00000390897 107 ntBASIC0.51□□□□□ -2.33
PCDHA4Q9UN74 AC114737.2-201ENST00000421583 173 ntBASIC0.51□□□□□ -2.33
PCDHA4Q9UN74 RNA5SP436-201ENST00000516020 115 ntBASIC0.51□□□□□ -2.33
PCDHA4Q9UN74 RNU6-782P-201ENST00000516852 104 ntBASIC0.51□□□□□ -2.33
PCDHA4Q9UN74 RNU7-174P-201ENST00000516248 59 ntBASIC0.5□□□□□ -2.33
PCDHA4Q9UN74 AC090625.1-201ENST00000357130 210 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 287.5 ms