Protein–RNA interactions for Protein: Q8TDD1

DDX54, ATP-dependent RNA helicase DDX54, humanhuman

Known RBP Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54Q8TDD1 MIR6866-201ENST00000638146 69 ntBASIC0.97□□□□□ -2.25
DDX54Q8TDD1 AC073869.9-201ENST00000641610 120 ntBASIC0.97□□□□□ -2.25
DDX54Q8TDD1 Y_RNA.115-201ENST00000363272 98 ntBASIC0.96□□□□□ -2.26
DDX54Q8TDD1 RNU6-1187P-201ENST00000364771 110 ntBASIC0.96□□□□□ -2.26
DDX54Q8TDD1 Y_RNA.443-201ENST00000384135 111 ntBASIC0.96□□□□□ -2.26
DDX54Q8TDD1 MIR1265-201ENST00000408444 86 ntBASIC0.96□□□□□ -2.26
DDX54Q8TDD1 RNA5SP193-201ENST00000410353 107 ntBASIC0.96□□□□□ -2.26
DDX54Q8TDD1 SNORA2.1-201ENST00000363089 137 ntBASIC0.95□□□□□ -2.26
DDX54Q8TDD1 SNORD114-23-201ENST00000363536 72 ntBASIC0.95□□□□□ -2.26
DDX54Q8TDD1 RNU6-645P-201ENST00000364649 106 ntBASIC0.95□□□□□ -2.26
DDX54Q8TDD1 MIR582-201ENST00000365731 98 ntBASIC0.95□□□□□ -2.26
DDX54Q8TDD1 Y_RNA.407-201ENST00000383986 113 ntBASIC0.95□□□□□ -2.26
DDX54Q8TDD1 RNU6-1232P-201ENST00000516299 86 ntBASIC0.95□□□□□ -2.26
DDX54Q8TDD1 HMGN2P22-201ENST00000427588 175 ntBASIC0.94□□□□□ -2.26
DDX54Q8TDD1 AC125388.1-201ENST00000459631 156 ntBASIC0.94□□□□□ -2.26
DDX54Q8TDD1 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.94□□□□□ -2.26
DDX54Q8TDD1 Y_RNA.433-201ENST00000384089 102 ntBASIC0.93□□□□□ -2.26
DDX54Q8TDD1 PSMC1P5-201ENST00000512850 177 ntBASIC0.93□□□□□ -2.26
DDX54Q8TDD1 SNORD118-201ENST00000363593 134 ntBASIC0.92□□□□□ -2.26
DDX54Q8TDD1 SNORD114-4-201ENST00000363962 75 ntBASIC0.92□□□□□ -2.26
DDX54Q8TDD1 Y_RNA.423-201ENST00000384057 113 ntBASIC0.92□□□□□ -2.26
DDX54Q8TDD1 RPL39P28-201ENST00000465655 155 ntBASIC0.92□□□□□ -2.26
DDX54Q8TDD1 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.91□□□□□ -2.26
DDX54Q8TDD1 SNORA40.8-201ENST00000411034 126 ntBASIC0.91□□□□□ -2.26
DDX54Q8TDD1 SCARNA17.3-201ENST00000516381 125 ntBASIC0.91□□□□□ -2.26
DDX54Q8TDD1 RNU6-656P-201ENST00000516785 107 ntBASIC0.91□□□□□ -2.26
DDX54Q8TDD1 AC010487.4-201ENST00000637027 61 ntBASIC0.91□□□□□ -2.26
DDX54Q8TDD1 RNU6-668P-201ENST00000364180 107 ntBASIC0.9□□□□□ -2.27
DDX54Q8TDD1 RNA5SP330-201ENST00000517096 96 ntBASIC0.9□□□□□ -2.27
DDX54Q8TDD1 MIR4711-201ENST00000578274 70 ntBASIC0.9□□□□□ -2.27
DDX54Q8TDD1 MIR924-201ENST00000638017 53 ntBASIC0.9□□□□□ -2.27
DDX54Q8TDD1 SNORA25.4-201ENST00000363666 124 ntBASIC0.89□□□□□ -2.27
DDX54Q8TDD1 AC098934.3-201ENST00000430450 190 ntBASIC0.89□□□□□ -2.27
DDX54Q8TDD1 AC021146.9-201ENST00000512503 156 ntBASIC0.89□□□□□ -2.27
DDX54Q8TDD1 RNA5SP347-201ENST00000362445 119 ntBASIC0.88□□□□□ -2.27
DDX54Q8TDD1 MIR548E-201ENST00000408287 88 ntBASIC0.88□□□□□ -2.27
DDX54Q8TDD1 MTND4LP1-201ENST00000446263 157 ntBASIC0.88□□□□□ -2.27
DDX54Q8TDD1 MIR518A1-201ENST00000385068 85 ntBASIC0.87□□□□□ -2.27
DDX54Q8TDD1 RNU6-229P-201ENST00000516614 102 ntBASIC0.87□□□□□ -2.27
DDX54Q8TDD1 uc_338.10-201ENST00000621872 182 ntBASIC0.87□□□□□ -2.27
DDX54Q8TDD1 MIR6739-201ENST00000622461 75 ntBASIC0.87□□□□□ -2.27
DDX54Q8TDD1 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
DDX54Q8TDD1 RNA5SP257-201ENST00000363023 116 ntBASIC0.86□□□□□ -2.27
DDX54Q8TDD1 MIR9-2-201ENST00000384838 87 ntBASIC0.86□□□□□ -2.27
DDX54Q8TDD1 MIR6755-201ENST00000619993 66 ntBASIC0.86□□□□□ -2.27
DDX54Q8TDD1 RNA5SP62-201ENST00000363457 110 ntBASIC0.85□□□□□ -2.27
DDX54Q8TDD1 RNA5SP499-201ENST00000363982 119 ntBASIC0.85□□□□□ -2.27
DDX54Q8TDD1 MIR146A-201ENST00000385201 99 ntBASIC0.85□□□□□ -2.27
DDX54Q8TDD1 SNORD71-201ENST00000411292 86 ntBASIC0.85□□□□□ -2.27
DDX54Q8TDD1 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.85□□□□□ -2.27
DDX54Q8TDD1 SNORA33.1-201ENST00000364957 130 ntBASIC0.84□□□□□ -2.27
DDX54Q8TDD1 SNORA2A-201ENST00000383885 135 ntBASIC0.84□□□□□ -2.27
DDX54Q8TDD1 RNU6-110P-201ENST00000384508 104 ntBASIC0.84□□□□□ -2.27
DDX54Q8TDD1 AL157398.1-201ENST00000452981 186 ntBASIC0.84□□□□□ -2.27
DDX54Q8TDD1 MIR5706-201ENST00000579841 80 ntBASIC0.84□□□□□ -2.27
DDX54Q8TDD1 MIR4653-201ENST00000585107 83 ntBASIC0.84□□□□□ -2.27
DDX54Q8TDD1 AC243829.3-201ENST00000622177 108 ntBASIC0.84□□□□□ -2.27
DDX54Q8TDD1 Y_RNA.125-201ENST00000363371 111 ntBASIC0.83□□□□□ -2.28
DDX54Q8TDD1 RNU6-471P-201ENST00000383944 106 ntBASIC0.83□□□□□ -2.28
DDX54Q8TDD1 RNA5SP121-201ENST00000516537 101 ntBASIC0.83□□□□□ -2.28
DDX54Q8TDD1 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.83□□□□□ -2.28
DDX54Q8TDD1 SNORA63.6-201ENST00000364921 119 ntBASIC0.82□□□□□ -2.28
DDX54Q8TDD1 MIR548C-201ENST00000384815 97 ntBASIC0.82□□□□□ -2.28
DDX54Q8TDD1 MIR8087-201ENST00000612745 78 ntBASIC0.82□□□□□ -2.28
DDX54Q8TDD1 RNU6-1162P-201ENST00000384443 104 ntBASIC0.81□□□□□ -2.28
DDX54Q8TDD1 MIR516B1-201ENST00000385211 90 ntBASIC0.81□□□□□ -2.28
DDX54Q8TDD1 Y_RNA.633-201ENST00000459107 95 ntBASIC0.81□□□□□ -2.28
DDX54Q8TDD1 RNU6-945P-201ENST00000383947 107 ntBASIC0.8□□□□□ -2.28
DDX54Q8TDD1 MIR521-2-201ENST00000384818 87 ntBASIC0.8□□□□□ -2.28
DDX54Q8TDD1 RNU6-1089P-201ENST00000516473 104 ntBASIC0.8□□□□□ -2.28
DDX54Q8TDD1 RNA5SP476-201ENST00000516613 103 ntBASIC0.8□□□□□ -2.28
DDX54Q8TDD1 MIR548V-201ENST00000584165 80 ntBASIC0.8□□□□□ -2.28
DDX54Q8TDD1 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
DDX54Q8TDD1 MIR501-201ENST00000390204 84 ntBASIC0.79□□□□□ -2.28
DDX54Q8TDD1 MIR760-201ENST00000390220 80 ntBASIC0.79□□□□□ -2.28
DDX54Q8TDD1 Y_RNA.250-201ENST00000364542 110 ntBASIC0.78□□□□□ -2.28
DDX54Q8TDD1 Y_RNA.375-201ENST00000365625 101 ntBASIC0.78□□□□□ -2.28
DDX54Q8TDD1 RNU7-188P-201ENST00000517063 64 ntBASIC0.78□□□□□ -2.28
DDX54Q8TDD1 MIR4511-201ENST00000582784 87 ntBASIC0.78□□□□□ -2.28
DDX54Q8TDD1 MIR499B-201ENST00000636498 73 ntBASIC0.78□□□□□ -2.28
DDX54Q8TDD1 RNU7-129P-201ENST00000516128 62 ntBASIC0.77□□□□□ -2.29
DDX54Q8TDD1 MIR4677-201ENST00000584153 80 ntBASIC0.77□□□□□ -2.29
DDX54Q8TDD1 MIR330-201ENST00000362196 94 ntBASIC0.76□□□□□ -2.29
DDX54Q8TDD1 RNA5SP299-201ENST00000391203 116 ntBASIC0.76□□□□□ -2.29
DDX54Q8TDD1 MIR1197-201ENST00000408818 88 ntBASIC0.76□□□□□ -2.29
DDX54Q8TDD1 AC090617.8-201ENST00000623339 167 ntBASIC0.76□□□□□ -2.29
DDX54Q8TDD1 MIR20A-201ENST00000362279 71 ntBASIC0.74□□□□□ -2.29
DDX54Q8TDD1 SNORA15B-2-201ENST00000384058 135 ntBASIC0.74□□□□□ -2.29
DDX54Q8TDD1 SNORA15B-1-201ENST00000384334 135 ntBASIC0.74□□□□□ -2.29
DDX54Q8TDD1 HAR1A.1-201ENST00000459583 118 ntBASIC0.74□□□□□ -2.29
DDX54Q8TDD1 SNORA68.3-201ENST00000515906 83 ntBASIC0.74□□□□□ -2.29
DDX54Q8TDD1 MIR103A1-201ENST00000362165 78 ntBASIC0.73□□□□□ -2.29
DDX54Q8TDD1 SNORD44.1-201ENST00000363202 61 ntBASIC0.73□□□□□ -2.29
DDX54Q8TDD1 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.73□□□□□ -2.29
DDX54Q8TDD1 U2.7-201ENST00000619197 100 ntBASIC0.73□□□□□ -2.29
DDX54Q8TDD1 MIR5087-201ENST00000635826 76 ntBASIC0.73□□□□□ -2.29
DDX54Q8TDD1 AC103706.3-201ENST00000636297 85 ntBASIC0.73□□□□□ -2.29
DDX54Q8TDD1 U6.96-201ENST00000636425 70 ntBASIC0.73□□□□□ -2.29
DDX54Q8TDD1 MIR630-201ENST00000384957 97 ntBASIC0.72□□□□□ -2.29
DDX54Q8TDD1 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 181.1 ms