Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 SNORA26.4-201ENST00000391188 123 ntBASIC-1.18□□□□□ -2.6
ZIC4Q8N9L1 SNORD63.1-201ENST00000516178 80 ntBASIC-1.18□□□□□ -2.6
ZIC4Q8N9L1 RNA5SP147-201ENST00000516493 109 ntBASIC-1.18□□□□□ -2.6
ZIC4Q8N9L1 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.18□□□□□ -2.6
ZIC4Q8N9L1 CYP3A54P-201ENST00000566950 75 ntBASIC-1.18□□□□□ -2.6
ZIC4Q8N9L1 MIR3657-201ENST00000584818 117 ntBASIC-1.18□□□□□ -2.6
ZIC4Q8N9L1 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.18□□□□□ -2.6
ZIC4Q8N9L1 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.19□□□□□ -2.6
ZIC4Q8N9L1 SNORD45B-201ENST00000364617 72 ntBASIC-1.19□□□□□ -2.6
ZIC4Q8N9L1 SNORD114-3-201ENST00000364969 75 ntBASIC-1.19□□□□□ -2.6
ZIC4Q8N9L1 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.19□□□□□ -2.6
ZIC4Q8N9L1 MIR203A-201ENST00000384836 110 ntBASIC-1.19□□□□□ -2.6
ZIC4Q8N9L1 MIR889-201ENST00000401280 79 ntBASIC-1.19□□□□□ -2.6
ZIC4Q8N9L1 AL118496.2-201ENST00000448300 230 ntBASIC-1.19□□□□□ -2.6
ZIC4Q8N9L1 RNA5SP272-201ENST00000516095 111 ntBASIC-1.19□□□□□ -2.6
ZIC4Q8N9L1 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-1.19□□□□□ -2.6
ZIC4Q8N9L1 MIR4520-1-201ENST00000582609 70 ntBASIC-1.19□□□□□ -2.6
ZIC4Q8N9L1 MIR4777-201ENST00000583710 86 ntBASIC-1.19□□□□□ -2.6
ZIC4Q8N9L1 MIR548Z-201ENST00000584743 97 ntBASIC-1.19□□□□□ -2.6
ZIC4Q8N9L1 SNORD115-33-201ENST00000363723 82 ntBASIC-1.2□□□□□ -2.6
ZIC4Q8N9L1 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.2□□□□□ -2.6
ZIC4Q8N9L1 MIR548I1-201ENST00000408810 149 ntBASIC-1.2□□□□□ -2.6
ZIC4Q8N9L1 RNU6-519P-201ENST00000410590 108 ntBASIC-1.2□□□□□ -2.6
ZIC4Q8N9L1 MIR6509-201ENST00000614603 85 ntBASIC-1.2□□□□□ -2.6
ZIC4Q8N9L1 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.2□□□□□ -2.6
ZIC4Q8N9L1 MIR6818-201ENST00000621576 65 ntBASIC-1.2□□□□□ -2.6
ZIC4Q8N9L1 RNU6-924P-201ENST00000362926 108 ntBASIC-1.21□□□□□ -2.6
ZIC4Q8N9L1 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.21□□□□□ -2.6
ZIC4Q8N9L1 SNORD115-22-201ENST00000364456 82 ntBASIC-1.21□□□□□ -2.6
ZIC4Q8N9L1 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.21□□□□□ -2.6
ZIC4Q8N9L1 MTATP6P29-201ENST00000415057 132 ntBASIC-1.21□□□□□ -2.6
ZIC4Q8N9L1 MTND3P2-201ENST00000438452 342 ntBASIC-1.21□□□□□ -2.6
ZIC4Q8N9L1 RNU6-983P-201ENST00000516004 103 ntBASIC-1.21□□□□□ -2.6
ZIC4Q8N9L1 MIR4503-201ENST00000582187 83 ntBASIC-1.21□□□□□ -2.6
ZIC4Q8N9L1 MIR4773-1-201ENST00000637203 78 ntBASIC-1.21□□□□□ -2.6
ZIC4Q8N9L1 RNY4P27-201ENST00000363341 96 ntBASIC-1.22□□□□□ -2.6
ZIC4Q8N9L1 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.22□□□□□ -2.6
ZIC4Q8N9L1 RNU6-772P-201ENST00000516042 105 ntBASIC-1.22□□□□□ -2.6
ZIC4Q8N9L1 AP001094.1-201ENST00000579805 193 ntBASIC-1.22□□□□□ -2.6
ZIC4Q8N9L1 U6.81-201ENST00000612550 106 ntBASIC-1.22□□□□□ -2.6
ZIC4Q8N9L1 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.22□□□□□ -2.6
ZIC4Q8N9L1 MIR6502-201ENST00000617296 76 ntBASIC-1.22□□□□□ -2.6
ZIC4Q8N9L1 RNU6-804P-201ENST00000384286 107 ntBASIC-1.23□□□□□ -2.61
ZIC4Q8N9L1 RNU7-154P-201ENST00000516194 62 ntBASIC-1.23□□□□□ -2.61
ZIC4Q8N9L1 MIR5009-201ENST00000578736 100 ntBASIC-1.23□□□□□ -2.61
ZIC4Q8N9L1 RNU6-200P-201ENST00000364743 107 ntBASIC-1.24□□□□□ -2.61
ZIC4Q8N9L1 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.24□□□□□ -2.61
ZIC4Q8N9L1 MIR521-2-201ENST00000384818 87 ntBASIC-1.24□□□□□ -2.61
ZIC4Q8N9L1 AC012531.4-201ENST00000616509 177 ntBASIC-1.24□□□□□ -2.61
ZIC4Q8N9L1 RNA5SP26-201ENST00000362406 119 ntBASIC-1.25□□□□□ -2.61
ZIC4Q8N9L1 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.25□□□□□ -2.61
ZIC4Q8N9L1 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.25□□□□□ -2.61
ZIC4Q8N9L1 SNORA63-201ENST00000363450 132 ntBASIC-1.25□□□□□ -2.61
ZIC4Q8N9L1 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.25□□□□□ -2.61
ZIC4Q8N9L1 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.25□□□□□ -2.61
ZIC4Q8N9L1 MIR519A2-201ENST00000384990 87 ntBASIC-1.25□□□□□ -2.61
ZIC4Q8N9L1 MIR527-201ENST00000385244 85 ntBASIC-1.25□□□□□ -2.61
ZIC4Q8N9L1 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.25□□□□□ -2.61
ZIC4Q8N9L1 RNU2-51P-201ENST00000410708 197 ntBASIC-1.25□□□□□ -2.61
ZIC4Q8N9L1 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.25□□□□□ -2.61
ZIC4Q8N9L1 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.25□□□□□ -2.61
ZIC4Q8N9L1 RNU6-732P-201ENST00000516033 103 ntBASIC-1.25□□□□□ -2.61
ZIC4Q8N9L1 RNU6-795P-201ENST00000516323 103 ntBASIC-1.25□□□□□ -2.61
ZIC4Q8N9L1 MIR3144-201ENST00000579460 79 ntBASIC-1.25□□□□□ -2.61
ZIC4Q8N9L1 MIR4723-201ENST00000585070 81 ntBASIC-1.25□□□□□ -2.61
ZIC4Q8N9L1 RNU5F-1-201ENST00000362507 117 ntBASIC-1.26□□□□□ -2.61
ZIC4Q8N9L1 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.26□□□□□ -2.61
ZIC4Q8N9L1 MTND4LP9-201ENST00000427694 174 ntBASIC-1.26□□□□□ -2.61
ZIC4Q8N9L1 AL691482.2-201ENST00000457453 84 ntBASIC-1.26□□□□□ -2.61
ZIC4Q8N9L1 RNU6-426P-201ENST00000516464 97 ntBASIC-1.26□□□□□ -2.61
ZIC4Q8N9L1 AL157777.2-201ENST00000258070 137 ntBASIC-1.27□□□□□ -2.61
ZIC4Q8N9L1 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.27□□□□□ -2.61
ZIC4Q8N9L1 SNORD18.1-201ENST00000363807 70 ntBASIC-1.27□□□□□ -2.61
ZIC4Q8N9L1 RNU6-574P-201ENST00000384265 107 ntBASIC-1.27□□□□□ -2.61
ZIC4Q8N9L1 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.27□□□□□ -2.61
ZIC4Q8N9L1 AC004792.1-201ENST00000614523 137 ntBASIC-1.27□□□□□ -2.61
ZIC4Q8N9L1 MIR6739-201ENST00000622461 75 ntBASIC-1.27□□□□□ -2.61
ZIC4Q8N9L1 SNORD58A-201ENST00000383875 65 ntBASIC-1.28□□□□□ -2.61
ZIC4Q8N9L1 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.28□□□□□ -2.61
ZIC4Q8N9L1 RNA5SP86-201ENST00000390869 98 ntBASIC-1.28□□□□□ -2.61
ZIC4Q8N9L1 RNU6-327P-201ENST00000516270 127 ntBASIC-1.28□□□□□ -2.61
ZIC4Q8N9L1 MTND5P41-201ENST00000517498 206 ntBASIC-1.28□□□□□ -2.61
ZIC4Q8N9L1 MIR548AG1-201ENST00000579932 66 ntBASIC-1.28□□□□□ -2.61
ZIC4Q8N9L1 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.29□□□□□ -2.62
ZIC4Q8N9L1 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.29□□□□□ -2.62
ZIC4Q8N9L1 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.29□□□□□ -2.62
ZIC4Q8N9L1 RNU6-880P-201ENST00000384526 107 ntBASIC-1.29□□□□□ -2.62
ZIC4Q8N9L1 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.29□□□□□ -2.62
ZIC4Q8N9L1 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.29□□□□□ -2.62
ZIC4Q8N9L1 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.3□□□□□ -2.62
ZIC4Q8N9L1 RNU6-196P-201ENST00000384315 107 ntBASIC-1.3□□□□□ -2.62
ZIC4Q8N9L1 RNU6-576P-201ENST00000390854 102 ntBASIC-1.3□□□□□ -2.62
ZIC4Q8N9L1 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.3□□□□□ -2.62
ZIC4Q8N9L1 AL353691.2-201ENST00000443795 59 ntBASIC-1.3□□□□□ -2.62
ZIC4Q8N9L1 RNU7-107P-201ENST00000459121 61 ntBASIC-1.3□□□□□ -2.62
ZIC4Q8N9L1 RNU6-518P-201ENST00000516056 96 ntBASIC-1.3□□□□□ -2.62
ZIC4Q8N9L1 RNU6-412P-201ENST00000516434 106 ntBASIC-1.3□□□□□ -2.62
ZIC4Q8N9L1 AP002795.1-201ENST00000534879 84 ntBASIC-1.3□□□□□ -2.62
ZIC4Q8N9L1 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.31□□□□□ -2.62
ZIC4Q8N9L1 RNU6-80P-201ENST00000384195 107 ntBASIC-1.31□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 204.9 ms