Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.23□□□□□ -2.61
CHMP2AO43633 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.23□□□□□ -2.61
CHMP2AO43633 CYP3A54P-201ENST00000566950 75 ntBASIC-1.23□□□□□ -2.61
CHMP2AO43633 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.24□□□□□ -2.61
CHMP2AO43633 SCARNA18B-201ENST00000458806 135 ntBASIC-1.24□□□□□ -2.61
CHMP2AO43633 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.24□□□□□ -2.61
CHMP2AO43633 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.24□□□□□ -2.61
CHMP2AO43633 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.25□□□□□ -2.61
CHMP2AO43633 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.25□□□□□ -2.61
CHMP2AO43633 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.25□□□□□ -2.61
CHMP2AO43633 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.25□□□□□ -2.61
CHMP2AO43633 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.26□□□□□ -2.61
CHMP2AO43633 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.26□□□□□ -2.61
CHMP2AO43633 AL691482.2-201ENST00000457453 84 ntBASIC-1.26□□□□□ -2.61
CHMP2AO43633 RNU6-659P-201ENST00000516454 104 ntBASIC-1.26□□□□□ -2.61
CHMP2AO43633 RNU7-153P-201ENST00000516455 62 ntBASIC-1.26□□□□□ -2.61
CHMP2AO43633 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.27□□□□□ -2.61
CHMP2AO43633 RNU5F-1-201ENST00000362507 117 ntBASIC-1.27□□□□□ -2.61
CHMP2AO43633 SNORA2.1-201ENST00000363089 137 ntBASIC-1.27□□□□□ -2.61
CHMP2AO43633 SCARNA23-201ENST00000516060 130 ntBASIC-1.27□□□□□ -2.61
CHMP2AO43633 RNU6-904P-201ENST00000516206 101 ntBASIC-1.27□□□□□ -2.61
CHMP2AO43633 RNU6-162P-201ENST00000516228 103 ntBASIC-1.27□□□□□ -2.61
CHMP2AO43633 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.27□□□□□ -2.61
CHMP2AO43633 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.28□□□□□ -2.61
CHMP2AO43633 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.28□□□□□ -2.61
CHMP2AO43633 RNU6-746P-201ENST00000384112 109 ntBASIC-1.28□□□□□ -2.61
CHMP2AO43633 RNU6-887P-201ENST00000410660 100 ntBASIC-1.28□□□□□ -2.61
CHMP2AO43633 RNU7-61P-201ENST00000515897 61 ntBASIC-1.28□□□□□ -2.61
CHMP2AO43633 MIR4796-201ENST00000580742 81 ntBASIC-1.28□□□□□ -2.61
CHMP2AO43633 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.29□□□□□ -2.62
CHMP2AO43633 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.29□□□□□ -2.62
CHMP2AO43633 RNU6-80P-201ENST00000384195 107 ntBASIC-1.29□□□□□ -2.62
CHMP2AO43633 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.29□□□□□ -2.62
CHMP2AO43633 U6.81-201ENST00000612550 106 ntBASIC-1.29□□□□□ -2.62
CHMP2AO43633 MIR590-201ENST00000385008 97 ntBASIC-1.3□□□□□ -2.62
CHMP2AO43633 RNU6-907P-201ENST00000390924 102 ntBASIC-1.3□□□□□ -2.62
CHMP2AO43633 snoU13.19-201ENST00000459148 104 ntBASIC-1.3□□□□□ -2.62
CHMP2AO43633 RNU6-274P-201ENST00000459566 107 ntBASIC-1.3□□□□□ -2.62
CHMP2AO43633 snoU83B.1-201ENST00000517136 88 ntBASIC-1.3□□□□□ -2.62
CHMP2AO43633 RNU6-972P-201ENST00000391208 107 ntBASIC-1.31□□□□□ -2.62
CHMP2AO43633 RNU7-134P-201ENST00000458997 64 ntBASIC-1.31□□□□□ -2.62
CHMP2AO43633 SNORD63.1-201ENST00000516178 80 ntBASIC-1.31□□□□□ -2.62
CHMP2AO43633 RNU6-109P-201ENST00000516364 107 ntBASIC-1.31□□□□□ -2.62
CHMP2AO43633 RNU6-184P-201ENST00000516514 107 ntBASIC-1.31□□□□□ -2.62
CHMP2AO43633 MIR548AG1-201ENST00000579932 66 ntBASIC-1.31□□□□□ -2.62
CHMP2AO43633 U6.95-201ENST00000636931 70 ntBASIC-1.31□□□□□ -2.62
CHMP2AO43633 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.32□□□□□ -2.62
CHMP2AO43633 MIR519A2-201ENST00000384990 87 ntBASIC-1.32□□□□□ -2.62
CHMP2AO43633 RNU6-537P-201ENST00000517277 103 ntBASIC-1.32□□□□□ -2.62
CHMP2AO43633 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.32□□□□□ -2.62
CHMP2AO43633 SNORD115-27-201ENST00000364430 82 ntBASIC-1.33□□□□□ -2.62
CHMP2AO43633 SNORD116-21-201ENST00000384507 92 ntBASIC-1.33□□□□□ -2.62
CHMP2AO43633 AC090425.1-201ENST00000610007 140 ntBASIC-1.33□□□□□ -2.62
CHMP2AO43633 SNORD115-22-201ENST00000364456 82 ntBASIC-1.34□□□□□ -2.62
CHMP2AO43633 RNU6-30P-201ENST00000384561 107 ntBASIC-1.34□□□□□ -2.62
CHMP2AO43633 RNU2-51P-201ENST00000410708 197 ntBASIC-1.34□□□□□ -2.62
CHMP2AO43633 RNA5SP470-201ENST00000516463 106 ntBASIC-1.34□□□□□ -2.62
CHMP2AO43633 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.35□□□□□ -2.63
CHMP2AO43633 RNU6-880P-201ENST00000384526 107 ntBASIC-1.35□□□□□ -2.63
CHMP2AO43633 MIR521-2-201ENST00000384818 87 ntBASIC-1.35□□□□□ -2.63
CHMP2AO43633 RNU6-518P-201ENST00000516056 96 ntBASIC-1.35□□□□□ -2.63
CHMP2AO43633 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.35□□□□□ -2.63
CHMP2AO43633 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.36□□□□□ -2.63
CHMP2AO43633 SCARNA17-201ENST00000516183 144 ntBASIC-1.36□□□□□ -2.63
CHMP2AO43633 MIR378F-201ENST00000578143 78 ntBASIC-1.36□□□□□ -2.63
CHMP2AO43633 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.36□□□□□ -2.63
CHMP2AO43633 SNORD116-10-201ENST00000363791 102 ntBASIC-1.37□□□□□ -2.63
CHMP2AO43633 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.37□□□□□ -2.63
CHMP2AO43633 U7.3-201ENST00000616123 62 ntBASIC-1.37□□□□□ -2.63
CHMP2AO43633 RNU6-924P-201ENST00000362926 108 ntBASIC-1.38□□□□□ -2.63
CHMP2AO43633 RNY1P5-201ENST00000383890 115 ntBASIC-1.38□□□□□ -2.63
CHMP2AO43633 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.38□□□□□ -2.63
CHMP2AO43633 SNORA19-201ENST00000384737 128 ntBASIC-1.38□□□□□ -2.63
CHMP2AO43633 SNORA26.4-201ENST00000391188 123 ntBASIC-1.39□□□□□ -2.63
CHMP2AO43633 MIR1236-201ENST00000408340 102 ntBASIC-1.39□□□□□ -2.63
CHMP2AO43633 MIR6739-201ENST00000622461 75 ntBASIC-1.39□□□□□ -2.63
CHMP2AO43633 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.4□□□□□ -2.63
CHMP2AO43633 SNORD116-14-201ENST00000383894 92 ntBASIC-1.4□□□□□ -2.63
CHMP2AO43633 SNORD116-17-201ENST00000383929 92 ntBASIC-1.4□□□□□ -2.63
CHMP2AO43633 SNORD116-15-201ENST00000384445 92 ntBASIC-1.4□□□□□ -2.63
CHMP2AO43633 SNORD116-19-201ENST00000384729 92 ntBASIC-1.4□□□□□ -2.63
CHMP2AO43633 RNU6-554P-201ENST00000410466 106 ntBASIC-1.4□□□□□ -2.63
CHMP2AO43633 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.4□□□□□ -2.63
CHMP2AO43633 AL450471.1-201ENST00000447509 127 ntBASIC-1.4□□□□□ -2.63
CHMP2AO43633 RNU7-88P-201ENST00000458752 63 ntBASIC-1.4□□□□□ -2.63
CHMP2AO43633 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.4□□□□□ -2.63
CHMP2AO43633 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.4□□□□□ -2.63
CHMP2AO43633 RNU6-340P-201ENST00000364005 107 ntBASIC-1.41□□□□□ -2.64
CHMP2AO43633 RNU6-412P-201ENST00000516434 106 ntBASIC-1.41□□□□□ -2.64
CHMP2AO43633 AP002795.1-201ENST00000534879 84 ntBASIC-1.41□□□□□ -2.64
CHMP2AO43633 MIR4719-201ENST00000585233 84 ntBASIC-1.41□□□□□ -2.64
CHMP2AO43633 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.41□□□□□ -2.64
CHMP2AO43633 RNU7-154P-201ENST00000516194 62 ntBASIC-1.42□□□□□ -2.64
CHMP2AO43633 RNY1P9-201ENST00000532431 109 ntBASIC-1.42□□□□□ -2.64
CHMP2AO43633 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.43□□□□□ -2.64
CHMP2AO43633 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.43□□□□□ -2.64
CHMP2AO43633 SNORD115-33-201ENST00000363723 82 ntBASIC-1.43□□□□□ -2.64
CHMP2AO43633 AL035461.1-201ENST00000421490 332 ntBASIC-1.43□□□□□ -2.64
CHMP2AO43633 RNU6-656P-201ENST00000516785 107 ntBASIC-1.43□□□□□ -2.64
CHMP2AO43633 RNU6-774P-201ENST00000363238 107 ntBASIC-1.44□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 209.3 ms