Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 snoU13.17-201ENST00000458802 104 ntBASIC0.2□□□□□ -2.38
SMARCAL1Q9NZC9 SNORA25.13-201ENST00000516395 103 ntBASIC0.2□□□□□ -2.38
SMARCAL1Q9NZC9 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.2□□□□□ -2.38
SMARCAL1Q9NZC9 MIR4315-1-201ENST00000636800 73 ntBASIC0.2□□□□□ -2.38
SMARCAL1Q9NZC9 MIR4315-2-201ENST00000640925 73 ntBASIC0.2□□□□□ -2.38
SMARCAL1Q9NZC9 RNU6-294P-201ENST00000364999 102 ntBASIC0.19□□□□□ -2.38
SMARCAL1Q9NZC9 SNORA24B-201ENST00000384176 131 ntBASIC0.19□□□□□ -2.38
SMARCAL1Q9NZC9 RNU6-675P-201ENST00000384236 104 ntBASIC0.19□□□□□ -2.38
SMARCAL1Q9NZC9 MIR516B1-201ENST00000385211 90 ntBASIC0.19□□□□□ -2.38
SMARCAL1Q9NZC9 RNU6-762P-201ENST00000517107 102 ntBASIC0.19□□□□□ -2.38
SMARCAL1Q9NZC9 MIR3925-201ENST00000584674 77 ntBASIC0.19□□□□□ -2.38
SMARCAL1Q9NZC9 MIR548BB-201ENST00000626714 66 ntBASIC0.19□□□□□ -2.38
SMARCAL1Q9NZC9 RNY4P3-201ENST00000365254 95 ntBASIC0.18□□□□□ -2.38
SMARCAL1Q9NZC9 RNU6-497P-201ENST00000365316 104 ntBASIC0.18□□□□□ -2.38
SMARCAL1Q9NZC9 Y_RNA.369-201ENST00000365568 117 ntBASIC0.18□□□□□ -2.38
SMARCAL1Q9NZC9 Y_RNA.437-201ENST00000384113 113 ntBASIC0.18□□□□□ -2.38
SMARCAL1Q9NZC9 Y_RNA.611-201ENST00000410682 108 ntBASIC0.18□□□□□ -2.38
SMARCAL1Q9NZC9 Y_RNA.681-201ENST00000516445 113 ntBASIC0.18□□□□□ -2.38
SMARCAL1Q9NZC9 uc_338.10-201ENST00000621872 182 ntBASIC0.18□□□□□ -2.38
SMARCAL1Q9NZC9 SNORD115-37-201ENST00000363768 82 ntBASIC0.17□□□□□ -2.38
SMARCAL1Q9NZC9 Y_RNA.407-201ENST00000383986 113 ntBASIC0.17□□□□□ -2.38
SMARCAL1Q9NZC9 MIR1295A-201ENST00000408463 79 ntBASIC0.17□□□□□ -2.38
SMARCAL1Q9NZC9 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.17□□□□□ -2.38
SMARCAL1Q9NZC9 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.17□□□□□ -2.38
SMARCAL1Q9NZC9 Y_RNA.68-201ENST00000362881 102 ntBASIC0.16□□□□□ -2.38
SMARCAL1Q9NZC9 Y_RNA.73-201ENST00000362910 113 ntBASIC0.16□□□□□ -2.38
SMARCAL1Q9NZC9 RNU6-1177P-201ENST00000391058 104 ntBASIC0.16□□□□□ -2.38
SMARCAL1Q9NZC9 SNORD42B-201ENST00000458893 67 ntBASIC0.16□□□□□ -2.38
SMARCAL1Q9NZC9 AC093729.1-201ENST00000513074 128 ntBASIC0.16□□□□□ -2.38
SMARCAL1Q9NZC9 IGLL4P-201ENST00000614590 133 ntBASIC0.16□□□□□ -2.38
SMARCAL1Q9NZC9 AC084368.1-201ENST00000620935 65 ntBASIC0.16□□□□□ -2.38
SMARCAL1Q9NZC9 RNU5F-1-201ENST00000362507 117 ntBASIC0.15□□□□□ -2.39
SMARCAL1Q9NZC9 RNA5SP214-201ENST00000363378 118 ntBASIC0.15□□□□□ -2.39
SMARCAL1Q9NZC9 RNY1P1-201ENST00000364372 112 ntBASIC0.15□□□□□ -2.39
SMARCAL1Q9NZC9 RNU6-652P-201ENST00000365488 107 ntBASIC0.15□□□□□ -2.39
SMARCAL1Q9NZC9 RNU6-154P-201ENST00000384306 106 ntBASIC0.15□□□□□ -2.39
SMARCAL1Q9NZC9 MIR652-201ENST00000385278 98 ntBASIC0.15□□□□□ -2.39
SMARCAL1Q9NZC9 RNU6-782P-201ENST00000516852 104 ntBASIC0.15□□□□□ -2.39
SMARCAL1Q9NZC9 SCARNA11.2-201ENST00000517183 154 ntBASIC0.15□□□□□ -2.39
SMARCAL1Q9NZC9 AC104408.1-201ENST00000605241 170 ntBASIC0.15□□□□□ -2.39
SMARCAL1Q9NZC9 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.14□□□□□ -2.39
SMARCAL1Q9NZC9 MIR2909-201ENST00000617113 69 ntBASIC0.14□□□□□ -2.39
SMARCAL1Q9NZC9 MIR494-201ENST00000349529 81 ntBASIC0.13□□□□□ -2.39
SMARCAL1Q9NZC9 MIR593-201ENST00000384856 100 ntBASIC0.13□□□□□ -2.39
SMARCAL1Q9NZC9 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
SMARCAL1Q9NZC9 RNA5SP299-201ENST00000391203 116 ntBASIC0.13□□□□□ -2.39
SMARCAL1Q9NZC9 MIR548H2-201ENST00000408874 88 ntBASIC0.13□□□□□ -2.39
SMARCAL1Q9NZC9 RNU7-188P-201ENST00000517063 64 ntBASIC0.13□□□□□ -2.39
SMARCAL1Q9NZC9 RNU6-495P-201ENST00000362995 107 ntBASIC0.12□□□□□ -2.39
SMARCAL1Q9NZC9 RNU6-1255P-201ENST00000363434 112 ntBASIC0.12□□□□□ -2.39
SMARCAL1Q9NZC9 RNU6-824P-201ENST00000363724 104 ntBASIC0.12□□□□□ -2.39
SMARCAL1Q9NZC9 AC140658.3-201ENST00000567603 271 ntBASIC0.12□□□□□ -2.39
SMARCAL1Q9NZC9 SNORD114-9-201ENST00000364370 72 ntBASIC0.11□□□□□ -2.39
SMARCAL1Q9NZC9 RNU6-1108P-201ENST00000516308 104 ntBASIC0.11□□□□□ -2.39
SMARCAL1Q9NZC9 RN7SL660P-201ENST00000614852 299 ntBASIC0.11□□□□□ -2.39
SMARCAL1Q9NZC9 MIR6718-201ENST00000616153 80 ntBASIC0.11□□□□□ -2.39
SMARCAL1Q9NZC9 RNU6-161P-201ENST00000363051 106 ntBASIC0.1□□□□□ -2.39
SMARCAL1Q9NZC9 SNORA42.1-201ENST00000363515 137 ntBASIC0.1□□□□□ -2.39
SMARCAL1Q9NZC9 RNU6-382P-201ENST00000365181 106 ntBASIC0.1□□□□□ -2.39
SMARCAL1Q9NZC9 MIR610-201ENST00000385139 96 ntBASIC0.1□□□□□ -2.39
SMARCAL1Q9NZC9 MIR876-201ENST00000401147 81 ntBASIC0.1□□□□□ -2.39
SMARCAL1Q9NZC9 AL450471.1-201ENST00000447509 127 ntBASIC0.1□□□□□ -2.39
SMARCAL1Q9NZC9 AC097510.1-201ENST00000510945 133 ntBASIC0.1□□□□□ -2.39
SMARCAL1Q9NZC9 MIR4773-1-201ENST00000637203 78 ntBASIC0.1□□□□□ -2.39
SMARCAL1Q9NZC9 AC006160.2-201ENST00000637708 154 ntBASIC0.1□□□□□ -2.39
SMARCAL1Q9NZC9 RNU6-208P-201ENST00000362431 107 ntBASIC0.09□□□□□ -2.4
SMARCAL1Q9NZC9 SNORD114-5-201ENST00000362928 70 ntBASIC0.09□□□□□ -2.4
SMARCAL1Q9NZC9 RNU6-624P-201ENST00000363411 107 ntBASIC0.09□□□□□ -2.4
SMARCAL1Q9NZC9 Y_RNA.371-201ENST00000365591 113 ntBASIC0.09□□□□□ -2.4
SMARCAL1Q9NZC9 MIR145-201ENST00000384967 88 ntBASIC0.09□□□□□ -2.4
SMARCAL1Q9NZC9 MIR450A2-201ENST00000385022 100 ntBASIC0.09□□□□□ -2.4
SMARCAL1Q9NZC9 SNORA75.1-201ENST00000391130 148 ntBASIC0.09□□□□□ -2.4
SMARCAL1Q9NZC9 SNORD75.2-201ENST00000408784 58 ntBASIC0.09□□□□□ -2.4
SMARCAL1Q9NZC9 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.09□□□□□ -2.4
SMARCAL1Q9NZC9 SCARNA17.3-201ENST00000516381 125 ntBASIC0.09□□□□□ -2.4
SMARCAL1Q9NZC9 Y_RNA.43-201ENST00000362670 111 ntBASIC0.08□□□□□ -2.4
SMARCAL1Q9NZC9 SNORD77.2-201ENST00000391045 68 ntBASIC0.08□□□□□ -2.4
SMARCAL1Q9NZC9 RNA5SP163-201ENST00000410304 99 ntBASIC0.08□□□□□ -2.4
SMARCAL1Q9NZC9 AC022137.1-201ENST00000483735 151 ntBASIC0.08□□□□□ -2.4
SMARCAL1Q9NZC9 MIR5588-201ENST00000581890 63 ntBASIC0.08□□□□□ -2.4
SMARCAL1Q9NZC9 MIR4768-201ENST00000585270 74 ntBASIC0.08□□□□□ -2.4
SMARCAL1Q9NZC9 SNORD114-4-201ENST00000363962 75 ntBASIC0.07□□□□□ -2.4
SMARCAL1Q9NZC9 SNORD114-29-201ENST00000364819 70 ntBASIC0.07□□□□□ -2.4
SMARCAL1Q9NZC9 RNU6-979P-201ENST00000383896 107 ntBASIC0.07□□□□□ -2.4
SMARCAL1Q9NZC9 RNU7-24P-201ENST00000458867 62 ntBASIC0.07□□□□□ -2.4
SMARCAL1Q9NZC9 RNA5SP285-201ENST00000516619 119 ntBASIC0.07□□□□□ -2.4
SMARCAL1Q9NZC9 RNU6-175P-201ENST00000516896 107 ntBASIC0.07□□□□□ -2.4
SMARCAL1Q9NZC9 AC062037.1-201ENST00000605302 128 ntBASIC0.07□□□□□ -2.4
SMARCAL1Q9NZC9 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.07□□□□□ -2.4
SMARCAL1Q9NZC9 MIR20A-201ENST00000362279 71 ntBASIC0.06□□□□□ -2.4
SMARCAL1Q9NZC9 Y_RNA.178-201ENST00000363832 102 ntBASIC0.06□□□□□ -2.4
SMARCAL1Q9NZC9 MIR106A-201ENST00000384870 81 ntBASIC0.06□□□□□ -2.4
SMARCAL1Q9NZC9 MIR5190-201ENST00000581537 80 ntBASIC0.06□□□□□ -2.4
SMARCAL1Q9NZC9 AC006254.2-201ENST00000603259 279 ntBASIC0.06□□□□□ -2.4
SMARCAL1Q9NZC9 U6.81-201ENST00000612550 106 ntBASIC0.06□□□□□ -2.4
SMARCAL1Q9NZC9 MIR6514-201ENST00000622549 70 ntBASIC0.06□□□□□ -2.4
SMARCAL1Q9NZC9 RNU6-990P-201ENST00000364385 104 ntBASIC0.05□□□□□ -2.4
SMARCAL1Q9NZC9 SNORD73B-201ENST00000364394 72 ntBASIC0.05□□□□□ -2.4
SMARCAL1Q9NZC9 MIR582-201ENST00000365731 98 ntBASIC0.05□□□□□ -2.4
SMARCAL1Q9NZC9 Y_RNA.433-201ENST00000384089 102 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 1596.2 ms