Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 RNU5F-1-201ENST00000362507 117 ntBASIC-0.43□□□□□ -2.48
SCN2AQ99250 SNORD49B-201ENST00000365172 72 ntBASIC-0.43□□□□□ -2.48
SCN2AQ99250 SNORD116-14-201ENST00000383894 92 ntBASIC-0.44□□□□□ -2.48
SCN2AQ99250 SNORD116-17-201ENST00000383929 92 ntBASIC-0.44□□□□□ -2.48
SCN2AQ99250 SNORD116-15-201ENST00000384445 92 ntBASIC-0.44□□□□□ -2.48
SCN2AQ99250 SNORD116-19-201ENST00000384729 92 ntBASIC-0.44□□□□□ -2.48
SCN2AQ99250 SNORD126-201ENST00000459475 77 ntBASIC-0.44□□□□□ -2.48
SCN2AQ99250 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.44□□□□□ -2.48
SCN2AQ99250 MIR2052-201ENST00000636055 55 ntBASIC-0.44□□□□□ -2.48
SCN2AQ99250 AC093726.3-201ENST00000637588 150 ntBASIC-0.44□□□□□ -2.48
SCN2AQ99250 SNORD114-14-201ENST00000362723 75 ntBASIC-0.45□□□□□ -2.48
SCN2AQ99250 RNA5SP292-201ENST00000390974 118 ntBASIC-0.45□□□□□ -2.48
SCN2AQ99250 RNU6-887P-201ENST00000410660 100 ntBASIC-0.45□□□□□ -2.48
SCN2AQ99250 RNU6-537P-201ENST00000517277 103 ntBASIC-0.45□□□□□ -2.48
SCN2AQ99250 RNU6-22P-201ENST00000384355 107 ntBASIC-0.45□□□□□ -2.48
SCN2AQ99250 MIR652-201ENST00000385278 98 ntBASIC-0.45□□□□□ -2.48
SCN2AQ99250 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.45□□□□□ -2.48
SCN2AQ99250 MIR9-2-201ENST00000384838 87 ntBASIC-0.46□□□□□ -2.48
SCN2AQ99250 SNORD75.2-201ENST00000408784 58 ntBASIC-0.46□□□□□ -2.48
SCN2AQ99250 RNU6-519P-201ENST00000410590 108 ntBASIC-0.46□□□□□ -2.48
SCN2AQ99250 AL590491.3-201ENST00000610731 82 ntBASIC-0.46□□□□□ -2.48
SCN2AQ99250 RNA5SP205-201ENST00000364653 136 ntBASIC-0.47□□□□□ -2.48
SCN2AQ99250 RNU6-54P-201ENST00000365563 107 ntBASIC-0.47□□□□□ -2.48
SCN2AQ99250 RNU4-63P-201ENST00000411313 118 ntBASIC-0.47□□□□□ -2.48
SCN2AQ99250 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.47□□□□□ -2.48
SCN2AQ99250 SCARNA23-201ENST00000516060 130 ntBASIC-0.47□□□□□ -2.48
SCN2AQ99250 MIR6507-201ENST00000613630 70 ntBASIC-0.47□□□□□ -2.48
SCN2AQ99250 MIR548AZ-201ENST00000616567 95 ntBASIC-0.47□□□□□ -2.48
SCN2AQ99250 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.47□□□□□ -2.49
SCN2AQ99250 MIR6739-201ENST00000622461 75 ntBASIC-0.47□□□□□ -2.49
SCN2AQ99250 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.47□□□□□ -2.49
SCN2AQ99250 SNORD116-21-201ENST00000384507 92 ntBASIC-0.48□□□□□ -2.49
SCN2AQ99250 RNU2-51P-201ENST00000410708 197 ntBASIC-0.48□□□□□ -2.49
SCN2AQ99250 MIR6854-201ENST00000614935 69 ntBASIC-0.48□□□□□ -2.49
SCN2AQ99250 MIR655-201ENST00000362159 97 ntBASIC-0.48□□□□□ -2.49
SCN2AQ99250 RNU6-644P-201ENST00000391155 98 ntBASIC-0.48□□□□□ -2.49
SCN2AQ99250 RNU6-502P-201ENST00000362419 108 ntBASIC-0.49□□□□□ -2.49
SCN2AQ99250 SNORA13-201ENST00000458790 133 ntBASIC-0.49□□□□□ -2.49
SCN2AQ99250 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.5□□□□□ -2.49
SCN2AQ99250 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.5□□□□□ -2.49
SCN2AQ99250 SNORA40.17-201ENST00000517256 115 ntBASIC-0.5□□□□□ -2.49
SCN2AQ99250 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.5□□□□□ -2.49
SCN2AQ99250 RNU6-900P-201ENST00000384498 102 ntBASIC-0.5□□□□□ -2.49
SCN2AQ99250 MIR196A2-201ENST00000385189 110 ntBASIC-0.5□□□□□ -2.49
SCN2AQ99250 RNU6-554P-201ENST00000410466 106 ntBASIC-0.5□□□□□ -2.49
SCN2AQ99250 AC097510.1-201ENST00000510945 133 ntBASIC-0.5□□□□□ -2.49
SCN2AQ99250 MIR4436A-201ENST00000585278 85 ntBASIC-0.5□□□□□ -2.49
SCN2AQ99250 AC103810.7-201ENST00000607821 91 ntBASIC-0.5□□□□□ -2.49
SCN2AQ99250 MIR6851-201ENST00000617060 67 ntBASIC-0.5□□□□□ -2.49
SCN2AQ99250 RNU6-106P-201ENST00000384405 107 ntBASIC-0.51□□□□□ -2.49
SCN2AQ99250 RNU6-813P-201ENST00000384691 107 ntBASIC-0.51□□□□□ -2.49
SCN2AQ99250 RNU6-904P-201ENST00000516206 101 ntBASIC-0.51□□□□□ -2.49
SCN2AQ99250 RNA5SP66-201ENST00000517178 101 ntBASIC-0.51□□□□□ -2.49
SCN2AQ99250 MIR3064-201ENST00000581130 66 ntBASIC-0.51□□□□□ -2.49
SCN2AQ99250 MIR8064-201ENST00000612863 90 ntBASIC-0.51□□□□□ -2.49
SCN2AQ99250 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.51□□□□□ -2.49
SCN2AQ99250 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.52□□□□□ -2.49
SCN2AQ99250 RNU6-774P-201ENST00000363238 107 ntBASIC-0.52□□□□□ -2.49
SCN2AQ99250 RNU6-476P-201ENST00000384726 107 ntBASIC-0.52□□□□□ -2.49
SCN2AQ99250 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.52□□□□□ -2.49
SCN2AQ99250 AC114755.3-201ENST00000481111 251 ntBASIC-0.52□□□□□ -2.49
SCN2AQ99250 RNU6-795P-201ENST00000516323 103 ntBASIC-0.52□□□□□ -2.49
SCN2AQ99250 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.52□□□□□ -2.49
SCN2AQ99250 snoU13.17-201ENST00000458802 104 ntBASIC-0.52□□□□□ -2.49
SCN2AQ99250 RNU7-55P-201ENST00000459426 62 ntBASIC-0.52□□□□□ -2.49
SCN2AQ99250 uc_338.36-201ENST00000622331 158 ntBASIC-0.52□□□□□ -2.49
SCN2AQ99250 MIR6509-201ENST00000614603 85 ntBASIC-0.53□□□□□ -2.49
SCN2AQ99250 RNU6-589P-201ENST00000516485 107 ntBASIC-0.54□□□□□ -2.5
SCN2AQ99250 MIR4280-201ENST00000582178 76 ntBASIC-0.54□□□□□ -2.5
SCN2AQ99250 MIR3133-201ENST00000583157 78 ntBASIC-0.54□□□□□ -2.5
SCN2AQ99250 MIR548Z-201ENST00000584743 97 ntBASIC-0.54□□□□□ -2.5
SCN2AQ99250 MIR6773-201ENST00000612812 74 ntBASIC-0.54□□□□□ -2.5
SCN2AQ99250 SNORD115-37-201ENST00000363768 82 ntBASIC-0.54□□□□□ -2.5
SCN2AQ99250 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.54□□□□□ -2.5
SCN2AQ99250 RNU6-681P-201ENST00000364012 104 ntBASIC-0.54□□□□□ -2.5
SCN2AQ99250 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.54□□□□□ -2.5
SCN2AQ99250 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.54□□□□□ -2.5
SCN2AQ99250 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.54□□□□□ -2.5
SCN2AQ99250 SNORD18.2-201ENST00000459604 70 ntBASIC-0.54□□□□□ -2.5
SCN2AQ99250 MIR3910-1-201ENST00000580936 111 ntBASIC-0.54□□□□□ -2.5
SCN2AQ99250 RNU6-905P-201ENST00000384434 107 ntBASIC-0.55□□□□□ -2.5
SCN2AQ99250 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.55□□□□□ -2.5
SCN2AQ99250 MIR519C-201ENST00000385053 87 ntBASIC-0.55□□□□□ -2.5
SCN2AQ99250 MT-TR-201ENST00000387439 65 ntBASIC-0.55□□□□□ -2.5
SCN2AQ99250 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.55□□□□□ -2.5
SCN2AQ99250 MIR4723-201ENST00000585070 81 ntBASIC-0.55□□□□□ -2.5
SCN2AQ99250 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.55□□□□□ -2.5
SCN2AQ99250 MIR1468-201ENST00000410600 86 ntBASIC-0.55□□□□□ -2.5
SCN2AQ99250 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.55□□□□□ -2.5
SCN2AQ99250 RNU6-274P-201ENST00000459566 107 ntBASIC-0.55□□□□□ -2.5
SCN2AQ99250 MIR4796-201ENST00000580742 81 ntBASIC-0.55□□□□□ -2.5
SCN2AQ99250 MIR3140-201ENST00000583685 90 ntBASIC-0.55□□□□□ -2.5
SCN2AQ99250 MIR3657-201ENST00000584818 117 ntBASIC-0.55□□□□□ -2.5
SCN2AQ99250 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.56□□□□□ -2.5
SCN2AQ99250 AL691482.2-201ENST00000457453 84 ntBASIC-0.56□□□□□ -2.5
SCN2AQ99250 SNORD42B-201ENST00000458893 67 ntBASIC-0.56□□□□□ -2.5
SCN2AQ99250 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.56□□□□□ -2.5
SCN2AQ99250 RNU6-762P-201ENST00000517107 102 ntBASIC-0.56□□□□□ -2.5
SCN2AQ99250 snoR1.1-201ENST00000628177 80 ntBASIC-0.56□□□□□ -2.5
SCN2AQ99250 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.57□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 261.2 ms