Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AC145423.2-201ENST00000610631 239 ntBASIC-1.06□□□□□ -2.58
SKA1Q96BD8 MIR582-201ENST00000365731 98 ntBASIC-1.07□□□□□ -2.58
SKA1Q96BD8 SNORD56B-201ENST00000384713 71 ntBASIC-1.07□□□□□ -2.58
SKA1Q96BD8 RNU6-659P-201ENST00000516454 104 ntBASIC-1.07□□□□□ -2.58
SKA1Q96BD8 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.08□□□□□ -2.58
SKA1Q96BD8 RNU6-132P-201ENST00000383863 107 ntBASIC-1.08□□□□□ -2.58
SKA1Q96BD8 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.08□□□□□ -2.58
SKA1Q96BD8 RNU6-519P-201ENST00000410590 108 ntBASIC-1.08□□□□□ -2.58
SKA1Q96BD8 SNORD42B-201ENST00000458893 67 ntBASIC-1.08□□□□□ -2.58
SKA1Q96BD8 RNU6-412P-201ENST00000516434 106 ntBASIC-1.08□□□□□ -2.58
SKA1Q96BD8 MIR3064-201ENST00000581130 66 ntBASIC-1.08□□□□□ -2.58
SKA1Q96BD8 AC104996.3-201ENST00000590718 94 ntBASIC-1.08□□□□□ -2.58
SKA1Q96BD8 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.09□□□□□ -2.58
SKA1Q96BD8 RNY1P7-201ENST00000384743 110 ntBASIC-1.09□□□□□ -2.58
SKA1Q96BD8 SNORA3B-201ENST00000391305 131 ntBASIC-1.09□□□□□ -2.58
SKA1Q96BD8 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.09□□□□□ -2.58
SKA1Q96BD8 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.1□□□□□ -2.59
SKA1Q96BD8 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.1□□□□□ -2.59
SKA1Q96BD8 MIR196A1-201ENST00000388006 70 ntBASIC-1.1□□□□□ -2.59
SKA1Q96BD8 SNORD4B-201ENST00000459083 72 ntBASIC-1.1□□□□□ -2.59
SKA1Q96BD8 AC021146.6-201ENST00000514659 117 ntBASIC-1.1□□□□□ -2.59
SKA1Q96BD8 MIR548Z-201ENST00000584743 97 ntBASIC-1.1□□□□□ -2.59
SKA1Q96BD8 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.11□□□□□ -2.59
SKA1Q96BD8 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.11□□□□□ -2.59
SKA1Q96BD8 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.11□□□□□ -2.59
SKA1Q96BD8 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.11□□□□□ -2.59
SKA1Q96BD8 SNORA13-201ENST00000458790 133 ntBASIC-1.11□□□□□ -2.59
SKA1Q96BD8 MIR4280-201ENST00000582178 76 ntBASIC-1.11□□□□□ -2.59
SKA1Q96BD8 RNU6-973P-201ENST00000364690 107 ntBASIC-1.12□□□□□ -2.59
SKA1Q96BD8 RNU6-880P-201ENST00000384526 107 ntBASIC-1.12□□□□□ -2.59
SKA1Q96BD8 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.12□□□□□ -2.59
SKA1Q96BD8 MIR6851-201ENST00000617060 67 ntBASIC-1.12□□□□□ -2.59
SKA1Q96BD8 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.13□□□□□ -2.59
SKA1Q96BD8 RNA5SP169-201ENST00000517268 117 ntBASIC-1.13□□□□□ -2.59
SKA1Q96BD8 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.13□□□□□ -2.59
SKA1Q96BD8 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.14□□□□□ -2.59
SKA1Q96BD8 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.14□□□□□ -2.59
SKA1Q96BD8 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.14□□□□□ -2.59
SKA1Q96BD8 RNU6-62P-201ENST00000516526 102 ntBASIC-1.14□□□□□ -2.59
SKA1Q96BD8 MIR4777-201ENST00000583710 86 ntBASIC-1.14□□□□□ -2.59
SKA1Q96BD8 RNU6-502P-201ENST00000362419 108 ntBASIC-1.15□□□□□ -2.59
SKA1Q96BD8 RNU6-495P-201ENST00000362995 107 ntBASIC-1.15□□□□□ -2.59
SKA1Q96BD8 SNORA63.6-201ENST00000364921 119 ntBASIC-1.15□□□□□ -2.59
SKA1Q96BD8 MIR3140-201ENST00000583685 90 ntBASIC-1.15□□□□□ -2.59
SKA1Q96BD8 SNORD116-14-201ENST00000383894 92 ntBASIC-1.16□□□□□ -2.6
SKA1Q96BD8 SNORD116-17-201ENST00000383929 92 ntBASIC-1.16□□□□□ -2.6
SKA1Q96BD8 SNORD116-15-201ENST00000384445 92 ntBASIC-1.16□□□□□ -2.6
SKA1Q96BD8 SNORD116-19-201ENST00000384729 92 ntBASIC-1.16□□□□□ -2.6
SKA1Q96BD8 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.16□□□□□ -2.6
SKA1Q96BD8 RNU6-795P-201ENST00000516323 103 ntBASIC-1.16□□□□□ -2.6
SKA1Q96BD8 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.16□□□□□ -2.6
SKA1Q96BD8 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.17□□□□□ -2.6
SKA1Q96BD8 SNORD116-21-201ENST00000384507 92 ntBASIC-1.17□□□□□ -2.6
SKA1Q96BD8 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.17□□□□□ -2.6
SKA1Q96BD8 RNU6-972P-201ENST00000391208 107 ntBASIC-1.17□□□□□ -2.6
SKA1Q96BD8 AC097510.1-201ENST00000510945 133 ntBASIC-1.17□□□□□ -2.6
SKA1Q96BD8 AC012531.4-201ENST00000616509 177 ntBASIC-1.17□□□□□ -2.6
SKA1Q96BD8 MTATP6P29-201ENST00000415057 132 ntBASIC-1.18□□□□□ -2.6
SKA1Q96BD8 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.18□□□□□ -2.6
SKA1Q96BD8 SCARNA23-201ENST00000516060 130 ntBASIC-1.18□□□□□ -2.6
SKA1Q96BD8 SNORD38.3-201ENST00000516599 73 ntBASIC-1.18□□□□□ -2.6
SKA1Q96BD8 snoR1.1-201ENST00000628177 80 ntBASIC-1.18□□□□□ -2.6
SKA1Q96BD8 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.19□□□□□ -2.6
SKA1Q96BD8 SNORD83B-201ENST00000386745 93 ntBASIC-1.19□□□□□ -2.6
SKA1Q96BD8 RNU6-476P-201ENST00000384726 107 ntBASIC-1.2□□□□□ -2.6
SKA1Q96BD8 RNU7-24P-201ENST00000458867 62 ntBASIC-1.2□□□□□ -2.6
SKA1Q96BD8 RNU6-209P-201ENST00000384118 107 ntBASIC-1.21□□□□□ -2.6
SKA1Q96BD8 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.21□□□□□ -2.6
SKA1Q96BD8 SNORD75.2-201ENST00000408784 58 ntBASIC-1.21□□□□□ -2.6
SKA1Q96BD8 SNX3P1X-201ENST00000414887 175 ntBASIC-1.21□□□□□ -2.6
SKA1Q96BD8 SCARNA17-201ENST00000516183 144 ntBASIC-1.21□□□□□ -2.6
SKA1Q96BD8 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.21□□□□□ -2.6
SKA1Q96BD8 SNORA24B-201ENST00000384176 131 ntBASIC-1.22□□□□□ -2.6
SKA1Q96BD8 MIR587-201ENST00000384845 96 ntBASIC-1.22□□□□□ -2.6
SKA1Q96BD8 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.22□□□□□ -2.6
SKA1Q96BD8 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.22□□□□□ -2.6
SKA1Q96BD8 MIR518B-201ENST00000385127 83 ntBASIC-1.23□□□□□ -2.61
SKA1Q96BD8 RNU6-887P-201ENST00000410660 100 ntBASIC-1.23□□□□□ -2.61
SKA1Q96BD8 RNU6-904P-201ENST00000516206 101 ntBASIC-1.23□□□□□ -2.61
SKA1Q96BD8 SNORA18.5-201ENST00000516616 101 ntBASIC-1.23□□□□□ -2.61
SKA1Q96BD8 MIR6773-201ENST00000612812 74 ntBASIC-1.23□□□□□ -2.61
SKA1Q96BD8 SNORD58A-201ENST00000383875 65 ntBASIC-1.24□□□□□ -2.61
SKA1Q96BD8 RNA5SP292-201ENST00000390974 118 ntBASIC-1.24□□□□□ -2.61
SKA1Q96BD8 RNU6-881P-201ENST00000516813 102 ntBASIC-1.24□□□□□ -2.61
SKA1Q96BD8 AC006254.2-201ENST00000603259 279 ntBASIC-1.24□□□□□ -2.61
SKA1Q96BD8 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.24□□□□□ -2.61
SKA1Q96BD8 MIR6854-201ENST00000614935 69 ntBASIC-1.25□□□□□ -2.61
SKA1Q96BD8 RNU5F-1-201ENST00000362507 117 ntBASIC-1.26□□□□□ -2.61
SKA1Q96BD8 RNU6-704P-201ENST00000364162 103 ntBASIC-1.26□□□□□ -2.61
SKA1Q96BD8 MIR1302-5-201ENST00000408164 150 ntBASIC-1.26□□□□□ -2.61
SKA1Q96BD8 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.26□□□□□ -2.61
SKA1Q96BD8 MIR3133-201ENST00000583157 78 ntBASIC-1.26□□□□□ -2.61
SKA1Q96BD8 RNU4-32P-201ENST00000363404 141 ntBASIC-1.27□□□□□ -2.61
SKA1Q96BD8 AC021146.9-201ENST00000512503 156 ntBASIC-1.27□□□□□ -2.61
SKA1Q96BD8 MIR548I1-201ENST00000408810 149 ntBASIC-1.28□□□□□ -2.61
SKA1Q96BD8 MIR3179-1-201ENST00000578940 84 ntBASIC-1.28□□□□□ -2.61
SKA1Q96BD8 MIR3179-2-201ENST00000579107 84 ntBASIC-1.28□□□□□ -2.61
SKA1Q96BD8 MIR3179-3-201ENST00000579566 84 ntBASIC-1.28□□□□□ -2.61
SKA1Q96BD8 MIR3668-201ENST00000582138 75 ntBASIC-1.28□□□□□ -2.61
SKA1Q96BD8 MIR5704-201ENST00000584029 77 ntBASIC-1.28□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 194.5 ms