Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.42□□□□□ -2.48
NUP54Q7Z3B4 SNORD2-201ENST00000459163 69 ntBASIC-0.42□□□□□ -2.48
NUP54Q7Z3B4 RNU7-55P-201ENST00000459426 62 ntBASIC-0.42□□□□□ -2.48
NUP54Q7Z3B4 SNORD126-201ENST00000459475 77 ntBASIC-0.42□□□□□ -2.48
NUP54Q7Z3B4 RNU6-719P-201ENST00000516671 104 ntBASIC-0.42□□□□□ -2.48
NUP54Q7Z3B4 RNU6-762P-201ENST00000517107 102 ntBASIC-0.42□□□□□ -2.48
NUP54Q7Z3B4 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.42□□□□□ -2.48
NUP54Q7Z3B4 MIR3910-1-201ENST00000580936 111 ntBASIC-0.42□□□□□ -2.48
NUP54Q7Z3B4 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.42□□□□□ -2.48
NUP54Q7Z3B4 MIR6129-201ENST00000616087 109 ntBASIC-0.42□□□□□ -2.48
NUP54Q7Z3B4 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.43□□□□□ -2.48
NUP54Q7Z3B4 RNU6-106P-201ENST00000384405 107 ntBASIC-0.43□□□□□ -2.48
NUP54Q7Z3B4 MIR590-201ENST00000385008 97 ntBASIC-0.43□□□□□ -2.48
NUP54Q7Z3B4 MIR196A2-201ENST00000385189 110 ntBASIC-0.43□□□□□ -2.48
NUP54Q7Z3B4 MIR4280-201ENST00000582178 76 ntBASIC-0.43□□□□□ -2.48
NUP54Q7Z3B4 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.44□□□□□ -2.48
NUP54Q7Z3B4 SNORD116-10-201ENST00000363791 102 ntBASIC-0.44□□□□□ -2.48
NUP54Q7Z3B4 RNU6-900P-201ENST00000384498 102 ntBASIC-0.44□□□□□ -2.48
NUP54Q7Z3B4 RNU6-554P-201ENST00000410466 106 ntBASIC-0.44□□□□□ -2.48
NUP54Q7Z3B4 RNU6-589P-201ENST00000516485 107 ntBASIC-0.44□□□□□ -2.48
NUP54Q7Z3B4 MIR548AZ-201ENST00000616567 95 ntBASIC-0.44□□□□□ -2.48
NUP54Q7Z3B4 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.44□□□□□ -2.48
NUP54Q7Z3B4 uc_338.36-201ENST00000622331 158 ntBASIC-0.44□□□□□ -2.48
NUP54Q7Z3B4 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.45□□□□□ -2.48
NUP54Q7Z3B4 RNU6-313P-201ENST00000516317 112 ntBASIC-0.45□□□□□ -2.48
NUP54Q7Z3B4 MIR4432-201ENST00000581823 84 ntBASIC-0.45□□□□□ -2.48
NUP54Q7Z3B4 AP001180.6-201ENST00000584918 159 ntBASIC-0.45□□□□□ -2.48
NUP54Q7Z3B4 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.46□□□□□ -2.48
NUP54Q7Z3B4 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.46□□□□□ -2.48
NUP54Q7Z3B4 RNY4P3-201ENST00000365254 95 ntBASIC-0.46□□□□□ -2.48
NUP54Q7Z3B4 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.46□□□□□ -2.48
NUP54Q7Z3B4 AP000676.1-201ENST00000533307 52 ntBASIC-0.46□□□□□ -2.48
NUP54Q7Z3B4 MIR3140-201ENST00000583685 90 ntBASIC-0.46□□□□□ -2.48
NUP54Q7Z3B4 RNU6-502P-201ENST00000362419 108 ntBASIC-0.47□□□□□ -2.48
NUP54Q7Z3B4 SNORD115-25-201ENST00000362619 82 ntBASIC-0.47□□□□□ -2.48
NUP54Q7Z3B4 RNU6-495P-201ENST00000362995 107 ntBASIC-0.47□□□□□ -2.48
NUP54Q7Z3B4 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.47□□□□□ -2.48
NUP54Q7Z3B4 SNORD90-201ENST00000391145 111 ntBASIC-0.47□□□□□ -2.48
NUP54Q7Z3B4 RNA5SP66-201ENST00000517178 101 ntBASIC-0.47□□□□□ -2.48
NUP54Q7Z3B4 RNA5SP169-201ENST00000517268 117 ntBASIC-0.47□□□□□ -2.48
NUP54Q7Z3B4 RNA5SP292-201ENST00000390974 118 ntBASIC-0.48□□□□□ -2.49
NUP54Q7Z3B4 RNA5SP451-201ENST00000410588 110 ntBASIC-0.48□□□□□ -2.49
NUP54Q7Z3B4 SNORA40.17-201ENST00000517256 115 ntBASIC-0.48□□□□□ -2.49
NUP54Q7Z3B4 MIR101-1-201ENST00000362265 75 ntBASIC-0.49□□□□□ -2.49
NUP54Q7Z3B4 SNORD113-1-201ENST00000365321 69 ntBASIC-0.49□□□□□ -2.49
NUP54Q7Z3B4 SNORA19-201ENST00000384737 128 ntBASIC-0.49□□□□□ -2.49
NUP54Q7Z3B4 RNU6-284P-201ENST00000411105 106 ntBASIC-0.49□□□□□ -2.49
NUP54Q7Z3B4 MTATP6P29-201ENST00000415057 132 ntBASIC-0.49□□□□□ -2.49
NUP54Q7Z3B4 snoU13.13-201ENST00000458842 104 ntBASIC-0.49□□□□□ -2.49
NUP54Q7Z3B4 RNU7-61P-201ENST00000515897 61 ntBASIC-0.49□□□□□ -2.49
NUP54Q7Z3B4 SNORA18.5-201ENST00000516616 101 ntBASIC-0.49□□□□□ -2.49
NUP54Q7Z3B4 MIR5589-201ENST00000579442 60 ntBASIC-0.49□□□□□ -2.49
NUP54Q7Z3B4 RNU6-766P-201ENST00000362478 107 ntBASIC-0.5□□□□□ -2.49
NUP54Q7Z3B4 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.5□□□□□ -2.49
NUP54Q7Z3B4 RNU2-51P-201ENST00000410708 197 ntBASIC-0.5□□□□□ -2.49
NUP54Q7Z3B4 RPS29P8-201ENST00000445109 171 ntBASIC-0.5□□□□□ -2.49
NUP54Q7Z3B4 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.5□□□□□ -2.49
NUP54Q7Z3B4 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.5□□□□□ -2.49
NUP54Q7Z3B4 AL391099.1-201ENST00000624635 187 ntBASIC-0.5□□□□□ -2.49
NUP54Q7Z3B4 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.51□□□□□ -2.49
NUP54Q7Z3B4 RNU6-337P-201ENST00000391243 106 ntBASIC-0.51□□□□□ -2.49
NUP54Q7Z3B4 AL603908.1-201ENST00000406098 201 ntBASIC-0.51□□□□□ -2.49
NUP54Q7Z3B4 AC114755.3-201ENST00000481111 251 ntBASIC-0.51□□□□□ -2.49
NUP54Q7Z3B4 RNU6-109P-201ENST00000516364 107 ntBASIC-0.51□□□□□ -2.49
NUP54Q7Z3B4 RNU6-184P-201ENST00000516514 107 ntBASIC-0.51□□□□□ -2.49
NUP54Q7Z3B4 MIR4493-201ENST00000584016 73 ntBASIC-0.51□□□□□ -2.49
NUP54Q7Z3B4 RNU4-32P-201ENST00000363404 141 ntBASIC-0.52□□□□□ -2.49
NUP54Q7Z3B4 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.52□□□□□ -2.49
NUP54Q7Z3B4 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.52□□□□□ -2.49
NUP54Q7Z3B4 RNU7-24P-201ENST00000458867 62 ntBASIC-0.52□□□□□ -2.49
NUP54Q7Z3B4 AC026421.1-201ENST00000519101 163 ntBASIC-0.52□□□□□ -2.49
NUP54Q7Z3B4 MIR4802-201ENST00000581881 80 ntBASIC-0.52□□□□□ -2.49
NUP54Q7Z3B4 MIR4436A-201ENST00000585278 85 ntBASIC-0.52□□□□□ -2.49
NUP54Q7Z3B4 MIR6851-201ENST00000617060 67 ntBASIC-0.52□□□□□ -2.49
NUP54Q7Z3B4 RNU6-990P-201ENST00000364385 104 ntBASIC-0.53□□□□□ -2.49
NUP54Q7Z3B4 RNU6-973P-201ENST00000364690 107 ntBASIC-0.53□□□□□ -2.49
NUP54Q7Z3B4 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.53□□□□□ -2.49
NUP54Q7Z3B4 SNORD75.1-201ENST00000408373 60 ntBASIC-0.53□□□□□ -2.49
NUP54Q7Z3B4 SNORD75.2-201ENST00000408784 58 ntBASIC-0.53□□□□□ -2.49
NUP54Q7Z3B4 RNU6-158P-201ENST00000517104 100 ntBASIC-0.53□□□□□ -2.49
NUP54Q7Z3B4 AC093726.3-201ENST00000637588 150 ntBASIC-0.53□□□□□ -2.49
NUP54Q7Z3B4 SNORD114-14-201ENST00000362723 75 ntBASIC-0.54□□□□□ -2.5
NUP54Q7Z3B4 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.54□□□□□ -2.5
NUP54Q7Z3B4 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.54□□□□□ -2.5
NUP54Q7Z3B4 SNORD38.3-201ENST00000516599 73 ntBASIC-0.54□□□□□ -2.5
NUP54Q7Z3B4 MIR6773-201ENST00000612812 74 ntBASIC-0.54□□□□□ -2.5
NUP54Q7Z3B4 U7.3-201ENST00000616123 62 ntBASIC-0.54□□□□□ -2.5
NUP54Q7Z3B4 SNORD115-23-201ENST00000364461 82 ntBASIC-0.55□□□□□ -2.5
NUP54Q7Z3B4 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.55□□□□□ -2.5
NUP54Q7Z3B4 MIR604-201ENST00000384880 94 ntBASIC-0.55□□□□□ -2.5
NUP54Q7Z3B4 RNU6-592P-201ENST00000411333 103 ntBASIC-0.55□□□□□ -2.5
NUP54Q7Z3B4 AL445193.1-201ENST00000441183 141 ntBASIC-0.55□□□□□ -2.5
NUP54Q7Z3B4 RNU5F-1-201ENST00000362507 117 ntBASIC-0.56□□□□□ -2.5
NUP54Q7Z3B4 MIR4636-201ENST00000582271 80 ntBASIC-0.56□□□□□ -2.5
NUP54Q7Z3B4 MIR5704-201ENST00000584029 77 ntBASIC-0.56□□□□□ -2.5
NUP54Q7Z3B4 SNORA63.6-201ENST00000364921 119 ntBASIC-0.57□□□□□ -2.5
NUP54Q7Z3B4 MIRLET7B-201ENST00000385140 83 ntBASIC-0.57□□□□□ -2.5
NUP54Q7Z3B4 MIR1236-201ENST00000408340 102 ntBASIC-0.57□□□□□ -2.5
NUP54Q7Z3B4 Z95118.1-201ENST00000421372 247 ntBASIC-0.57□□□□□ -2.5
NUP54Q7Z3B4 snoU13.17-201ENST00000458802 104 ntBASIC-0.57□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 940.6 ms