Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.08□□□□□ -2.42
PDLIM3Q53GG5 RNU6-589P-201ENST00000516485 107 ntBASIC-0.08□□□□□ -2.42
PDLIM3Q53GG5 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.08□□□□□ -2.42
PDLIM3Q53GG5 MIR198-201ENST00000637333 62 ntBASIC-0.08□□□□□ -2.42
PDLIM3Q53GG5 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.09□□□□□ -2.42
PDLIM3Q53GG5 MIR450A1-201ENST00000362262 91 ntBASIC-0.1□□□□□ -2.43
PDLIM3Q53GG5 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.1□□□□□ -2.43
PDLIM3Q53GG5 SNORA32.1-201ENST00000364514 115 ntBASIC-0.1□□□□□ -2.43
PDLIM3Q53GG5 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.1□□□□□ -2.43
PDLIM3Q53GG5 RNU4-63P-201ENST00000411313 118 ntBASIC-0.1□□□□□ -2.43
PDLIM3Q53GG5 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.1□□□□□ -2.43
PDLIM3Q53GG5 RN7SL660P-201ENST00000614852 299 ntBASIC-0.1□□□□□ -2.43
PDLIM3Q53GG5 RNU6-834P-201ENST00000362367 110 ntBASIC-0.11□□□□□ -2.43
PDLIM3Q53GG5 RNU4-32P-201ENST00000363404 141 ntBASIC-0.11□□□□□ -2.43
PDLIM3Q53GG5 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.11□□□□□ -2.43
PDLIM3Q53GG5 SNORD58A-201ENST00000383875 65 ntBASIC-0.11□□□□□ -2.43
PDLIM3Q53GG5 RNU6-972P-201ENST00000391208 107 ntBASIC-0.11□□□□□ -2.43
PDLIM3Q53GG5 RNU6-887P-201ENST00000410660 100 ntBASIC-0.11□□□□□ -2.43
PDLIM3Q53GG5 SNORD4B-201ENST00000459083 72 ntBASIC-0.11□□□□□ -2.43
PDLIM3Q53GG5 RNU6-789P-201ENST00000517105 102 ntBASIC-0.11□□□□□ -2.43
PDLIM3Q53GG5 RNU6-54P-201ENST00000365563 107 ntBASIC-0.12□□□□□ -2.43
PDLIM3Q53GG5 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.12□□□□□ -2.43
PDLIM3Q53GG5 MIR548U-201ENST00000390728 81 ntBASIC-0.12□□□□□ -2.43
PDLIM3Q53GG5 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.13□□□□□ -2.43
PDLIM3Q53GG5 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.13□□□□□ -2.43
PDLIM3Q53GG5 RNU6-811P-201ENST00000384069 107 ntBASIC-0.13□□□□□ -2.43
PDLIM3Q53GG5 MIR652-201ENST00000385278 98 ntBASIC-0.13□□□□□ -2.43
PDLIM3Q53GG5 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.13□□□□□ -2.43
PDLIM3Q53GG5 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.13□□□□□ -2.43
PDLIM3Q53GG5 RNU7-165P-201ENST00000458864 60 ntBASIC-0.13□□□□□ -2.43
PDLIM3Q53GG5 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.13□□□□□ -2.43
PDLIM3Q53GG5 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.13□□□□□ -2.43
PDLIM3Q53GG5 AC026421.1-201ENST00000519101 163 ntBASIC-0.13□□□□□ -2.43
PDLIM3Q53GG5 MIR3064-201ENST00000581130 66 ntBASIC-0.13□□□□□ -2.43
PDLIM3Q53GG5 MIR3140-201ENST00000583685 90 ntBASIC-0.13□□□□□ -2.43
PDLIM3Q53GG5 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.13□□□□□ -2.43
PDLIM3Q53GG5 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.13□□□□□ -2.43
PDLIM3Q53GG5 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.14□□□□□ -2.43
PDLIM3Q53GG5 SNORD114-29-201ENST00000364819 70 ntBASIC-0.14□□□□□ -2.43
PDLIM3Q53GG5 RNA5SP292-201ENST00000390974 118 ntBASIC-0.14□□□□□ -2.43
PDLIM3Q53GG5 MIR876-201ENST00000401147 81 ntBASIC-0.14□□□□□ -2.43
PDLIM3Q53GG5 AL031737.1-201ENST00000450125 223 ntBASIC-0.14□□□□□ -2.43
PDLIM3Q53GG5 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.14□□□□□ -2.43
PDLIM3Q53GG5 RNU6-537P-201ENST00000517277 103 ntBASIC-0.14□□□□□ -2.43
PDLIM3Q53GG5 AC104996.3-201ENST00000590718 94 ntBASIC-0.14□□□□□ -2.43
PDLIM3Q53GG5 MIR548O2-201ENST00000616090 70 ntBASIC-0.14□□□□□ -2.43
PDLIM3Q53GG5 U7.3-201ENST00000616123 62 ntBASIC-0.14□□□□□ -2.43
PDLIM3Q53GG5 RNU6-161P-201ENST00000363051 106 ntBASIC-0.15□□□□□ -2.43
PDLIM3Q53GG5 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.15□□□□□ -2.43
PDLIM3Q53GG5 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.15□□□□□ -2.43
PDLIM3Q53GG5 MIR216B-201ENST00000390186 82 ntBASIC-0.15□□□□□ -2.43
PDLIM3Q53GG5 RNU6-180P-201ENST00000516697 61 ntBASIC-0.15□□□□□ -2.43
PDLIM3Q53GG5 MIR4743-201ENST00000584576 69 ntBASIC-0.15□□□□□ -2.43
PDLIM3Q53GG5 RNU6-766P-201ENST00000362478 107 ntBASIC-0.16□□□□□ -2.44
PDLIM3Q53GG5 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.16□□□□□ -2.44
PDLIM3Q53GG5 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.16□□□□□ -2.44
PDLIM3Q53GG5 SNORD114-12-201ENST00000365400 75 ntBASIC-0.16□□□□□ -2.44
PDLIM3Q53GG5 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.16□□□□□ -2.44
PDLIM3Q53GG5 RNY4P18-201ENST00000391107 89 ntBASIC-0.16□□□□□ -2.44
PDLIM3Q53GG5 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.16□□□□□ -2.44
PDLIM3Q53GG5 SNORA63.4-201ENST00000362763 126 ntBASIC-0.17□□□□□ -2.44
PDLIM3Q53GG5 SNORD113-1-201ENST00000365321 69 ntBASIC-0.17□□□□□ -2.44
PDLIM3Q53GG5 CR383656.4-201ENST00000546909 122 ntBASIC-0.17□□□□□ -2.44
PDLIM3Q53GG5 MIR1295B-201ENST00000636144 60 ntBASIC-0.17□□□□□ -2.44
PDLIM3Q53GG5 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.18□□□□□ -2.44
PDLIM3Q53GG5 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.18□□□□□ -2.44
PDLIM3Q53GG5 SNORA18.5-201ENST00000516616 101 ntBASIC-0.18□□□□□ -2.44
PDLIM3Q53GG5 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.18□□□□□ -2.44
PDLIM3Q53GG5 SNORD116-10-201ENST00000363791 102 ntBASIC-0.19□□□□□ -2.44
PDLIM3Q53GG5 SNORD90-201ENST00000391145 111 ntBASIC-0.19□□□□□ -2.44
PDLIM3Q53GG5 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.19□□□□□ -2.44
PDLIM3Q53GG5 SNORD20-201ENST00000384550 80 ntBASIC-0.2□□□□□ -2.44
PDLIM3Q53GG5 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.2□□□□□ -2.44
PDLIM3Q53GG5 U3.27-201ENST00000391237 200 ntBASIC-0.2□□□□□ -2.44
PDLIM3Q53GG5 RNU6-175P-201ENST00000516896 107 ntBASIC-0.2□□□□□ -2.44
PDLIM3Q53GG5 U2.22-201ENST00000636441 106 ntBASIC-0.2□□□□□ -2.44
PDLIM3Q53GG5 MIR20A-201ENST00000362279 71 ntBASIC-0.21□□□□□ -2.44
PDLIM3Q53GG5 SNORA63.2-201ENST00000362603 126 ntBASIC-0.21□□□□□ -2.44
PDLIM3Q53GG5 SNORD114-3-201ENST00000364969 75 ntBASIC-0.21□□□□□ -2.44
PDLIM3Q53GG5 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.21□□□□□ -2.44
PDLIM3Q53GG5 RNU6-406P-201ENST00000516470 107 ntBASIC-0.21□□□□□ -2.44
PDLIM3Q53GG5 MIR4320-201ENST00000636981 65 ntBASIC-0.21□□□□□ -2.44
PDLIM3Q53GG5 SNORD42B-201ENST00000458893 67 ntBASIC-0.22□□□□□ -2.44
PDLIM3Q53GG5 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.22□□□□□ -2.44
PDLIM3Q53GG5 AP000676.1-201ENST00000533307 52 ntBASIC-0.22□□□□□ -2.44
PDLIM3Q53GG5 MIR548AI-201ENST00000579940 88 ntBASIC-0.22□□□□□ -2.44
PDLIM3Q53GG5 MTATP6P29-201ENST00000415057 132 ntBASIC-0.23□□□□□ -2.45
PDLIM3Q53GG5 MIR148A-201ENST00000362215 68 ntBASIC-0.24□□□□□ -2.45
PDLIM3Q53GG5 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.24□□□□□ -2.45
PDLIM3Q53GG5 MIR587-201ENST00000384845 96 ntBASIC-0.24□□□□□ -2.45
PDLIM3Q53GG5 MT-TQ-201ENST00000387372 72 ntBASIC-0.24□□□□□ -2.45
PDLIM3Q53GG5 MTATP8P2-201ENST00000435212 202 ntBASIC-0.24□□□□□ -2.45
PDLIM3Q53GG5 MIR6507-201ENST00000613630 70 ntBASIC-0.24□□□□□ -2.45
PDLIM3Q53GG5 AC244090.1-201ENST00000441884 93 ntBASIC-0.25□□□□□ -2.45
PDLIM3Q53GG5 MIR582-201ENST00000365731 98 ntBASIC-0.26□□□□□ -2.45
PDLIM3Q53GG5 SNORD4A-201ENST00000459174 72 ntBASIC-0.26□□□□□ -2.45
PDLIM3Q53GG5 RNU7-153P-201ENST00000516455 62 ntBASIC-0.26□□□□□ -2.45
PDLIM3Q53GG5 SNORD114-4-201ENST00000363962 75 ntBASIC-0.27□□□□□ -2.45
PDLIM3Q53GG5 RNU6-44P-201ENST00000384045 107 ntBASIC-0.27□□□□□ -2.45
PDLIM3Q53GG5 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.27□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms