Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 SNORA32.3-201ENST00000384772 121 ntBASIC-0.65□□□□□ -2.51
LIM2P55344 SNORA13-201ENST00000458790 133 ntBASIC-0.65□□□□□ -2.51
LIM2P55344 RNU6-62P-201ENST00000516526 102 ntBASIC-0.65□□□□□ -2.51
LIM2P55344 RNU6-502P-201ENST00000362419 108 ntBASIC-0.66□□□□□ -2.52
LIM2P55344 RNU6-973P-201ENST00000364690 107 ntBASIC-0.66□□□□□ -2.52
LIM2P55344 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.66□□□□□ -2.52
LIM2P55344 RNU6-519P-201ENST00000410590 108 ntBASIC-0.66□□□□□ -2.52
LIM2P55344 snoU13.13-201ENST00000458842 104 ntBASIC-0.66□□□□□ -2.52
LIM2P55344 MIR548Z-201ENST00000584743 97 ntBASIC-0.66□□□□□ -2.52
LIM2P55344 MIR6851-201ENST00000617060 67 ntBASIC-0.66□□□□□ -2.52
LIM2P55344 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.67□□□□□ -2.52
LIM2P55344 SNORA24B-201ENST00000384176 131 ntBASIC-0.67□□□□□ -2.52
LIM2P55344 MIR548I1-201ENST00000408810 149 ntBASIC-0.67□□□□□ -2.52
LIM2P55344 AL445193.1-201ENST00000441183 141 ntBASIC-0.67□□□□□ -2.52
LIM2P55344 RNU7-24P-201ENST00000458867 62 ntBASIC-0.67□□□□□ -2.52
LIM2P55344 RNA5SP476-201ENST00000516613 103 ntBASIC-0.67□□□□□ -2.52
LIM2P55344 SNORD95.1-201ENST00000364099 68 ntBASIC-0.68□□□□□ -2.52
LIM2P55344 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.68□□□□□ -2.52
LIM2P55344 RNY4P3-201ENST00000365254 95 ntBASIC-0.68□□□□□ -2.52
LIM2P55344 SNORD116-21-201ENST00000384507 92 ntBASIC-0.68□□□□□ -2.52
LIM2P55344 RNU6-972P-201ENST00000391208 107 ntBASIC-0.68□□□□□ -2.52
LIM2P55344 SCARNA23-201ENST00000516060 130 ntBASIC-0.68□□□□□ -2.52
LIM2P55344 RNU6-795P-201ENST00000516323 103 ntBASIC-0.68□□□□□ -2.52
LIM2P55344 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.68□□□□□ -2.52
LIM2P55344 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.68□□□□□ -2.52
LIM2P55344 MIR3140-201ENST00000583685 90 ntBASIC-0.68□□□□□ -2.52
LIM2P55344 AC012531.4-201ENST00000616509 177 ntBASIC-0.68□□□□□ -2.52
LIM2P55344 AL391099.1-201ENST00000624635 187 ntBASIC-0.68□□□□□ -2.52
LIM2P55344 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.69□□□□□ -2.52
LIM2P55344 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.69□□□□□ -2.52
LIM2P55344 RNU6-476P-201ENST00000384726 107 ntBASIC-0.69□□□□□ -2.52
LIM2P55344 MIR204-201ENST00000385200 110 ntBASIC-0.69□□□□□ -2.52
LIM2P55344 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.69□□□□□ -2.52
LIM2P55344 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.69□□□□□ -2.52
LIM2P55344 snoU13.19-201ENST00000459148 104 ntBASIC-0.69□□□□□ -2.52
LIM2P55344 RNU6-904P-201ENST00000516206 101 ntBASIC-0.69□□□□□ -2.52
LIM2P55344 MIR3671-201ENST00000580455 88 ntBASIC-0.69□□□□□ -2.52
LIM2P55344 RNU6-704P-201ENST00000364162 103 ntBASIC-0.7□□□□□ -2.52
LIM2P55344 SNORA63.6-201ENST00000364921 119 ntBASIC-0.7□□□□□ -2.52
LIM2P55344 SNORD58A-201ENST00000383875 65 ntBASIC-0.7□□□□□ -2.52
LIM2P55344 RNU6-209P-201ENST00000384118 107 ntBASIC-0.7□□□□□ -2.52
LIM2P55344 SNORD75.1-201ENST00000408373 60 ntBASIC-0.7□□□□□ -2.52
LIM2P55344 RNA5SP169-201ENST00000517268 117 ntBASIC-0.7□□□□□ -2.52
LIM2P55344 SNORD75.2-201ENST00000408784 58 ntBASIC-0.71□□□□□ -2.52
LIM2P55344 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.71□□□□□ -2.52
LIM2P55344 AC097510.1-201ENST00000510945 133 ntBASIC-0.71□□□□□ -2.52
LIM2P55344 AC021146.6-201ENST00000514659 117 ntBASIC-0.71□□□□□ -2.52
LIM2P55344 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.71□□□□□ -2.52
LIM2P55344 RNU6-746P-201ENST00000384112 109 ntBASIC-0.72□□□□□ -2.52
LIM2P55344 SNORA3B-201ENST00000391305 131 ntBASIC-0.72□□□□□ -2.52
LIM2P55344 RNU6-887P-201ENST00000410660 100 ntBASIC-0.72□□□□□ -2.52
LIM2P55344 MTATP6P29-201ENST00000415057 132 ntBASIC-0.72□□□□□ -2.52
LIM2P55344 SNORA18.5-201ENST00000516616 101 ntBASIC-0.72□□□□□ -2.52
LIM2P55344 MIR3133-201ENST00000583157 78 ntBASIC-0.72□□□□□ -2.52
LIM2P55344 MIR6773-201ENST00000612812 74 ntBASIC-0.72□□□□□ -2.52
LIM2P55344 RNA5SP292-201ENST00000390974 118 ntBASIC-0.73□□□□□ -2.53
LIM2P55344 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.73□□□□□ -2.53
LIM2P55344 HAR1A.1-201ENST00000459583 118 ntBASIC-0.73□□□□□ -2.53
LIM2P55344 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.73□□□□□ -2.53
LIM2P55344 SNORD38.3-201ENST00000516599 73 ntBASIC-0.73□□□□□ -2.53
LIM2P55344 SNORD116-10-201ENST00000363791 102 ntBASIC-0.75□□□□□ -2.53
LIM2P55344 MIR518B-201ENST00000385127 83 ntBASIC-0.75□□□□□ -2.53
LIM2P55344 MIR3668-201ENST00000582138 75 ntBASIC-0.75□□□□□ -2.53
LIM2P55344 AC006254.2-201ENST00000603259 279 ntBASIC-0.75□□□□□ -2.53
LIM2P55344 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.75□□□□□ -2.53
LIM2P55344 RNU6-959P-201ENST00000384671 107 ntBASIC-0.76□□□□□ -2.53
LIM2P55344 MIR1302-5-201ENST00000408164 150 ntBASIC-0.76□□□□□ -2.53
LIM2P55344 SNORA19.1-201ENST00000410656 129 ntBASIC-0.76□□□□□ -2.53
LIM2P55344 MIR4436A-201ENST00000585278 85 ntBASIC-0.76□□□□□ -2.53
LIM2P55344 MIR6854-201ENST00000614935 69 ntBASIC-0.76□□□□□ -2.53
LIM2P55344 SNORD74.6-201ENST00000364796 70 ntBASIC-0.77□□□□□ -2.53
LIM2P55344 MIRLET7B-201ENST00000385140 83 ntBASIC-0.77□□□□□ -2.53
LIM2P55344 RNU6-337P-201ENST00000391243 106 ntBASIC-0.77□□□□□ -2.53
LIM2P55344 RNU6-592P-201ENST00000411333 103 ntBASIC-0.77□□□□□ -2.53
LIM2P55344 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.77□□□□□ -2.53
LIM2P55344 RNU6-537P-201ENST00000517277 103 ntBASIC-0.77□□□□□ -2.53
LIM2P55344 RNU6-990P-201ENST00000364385 104 ntBASIC-0.78□□□□□ -2.53
LIM2P55344 SNORD115-23-201ENST00000364461 82 ntBASIC-0.78□□□□□ -2.53
LIM2P55344 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.78□□□□□ -2.53
LIM2P55344 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.78□□□□□ -2.53
LIM2P55344 SNORD90-201ENST00000391145 111 ntBASIC-0.78□□□□□ -2.53
LIM2P55344 AC008267.6-201ENST00000441664 139 ntBASIC-0.78□□□□□ -2.53
LIM2P55344 snoR1.1-201ENST00000628177 80 ntBASIC-0.78□□□□□ -2.53
LIM2P55344 RNU5F-1-201ENST00000362507 117 ntBASIC-0.79□□□□□ -2.54
LIM2P55344 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.79□□□□□ -2.54
LIM2P55344 RNU4-63P-201ENST00000411313 118 ntBASIC-0.79□□□□□ -2.54
LIM2P55344 MIR5704-201ENST00000584029 77 ntBASIC-0.79□□□□□ -2.54
LIM2P55344 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.79□□□□□ -2.54
LIM2P55344 RNU6-774P-201ENST00000363238 107 ntBASIC-0.8□□□□□ -2.54
LIM2P55344 RNU4-32P-201ENST00000363404 141 ntBASIC-0.8□□□□□ -2.54
LIM2P55344 RNU6-382P-201ENST00000365181 106 ntBASIC-0.8□□□□□ -2.54
LIM2P55344 RNU6-81P-201ENST00000365608 104 ntBASIC-0.8□□□□□ -2.54
LIM2P55344 MT-TQ-201ENST00000387372 72 ntBASIC-0.8□□□□□ -2.54
LIM2P55344 AC021146.9-201ENST00000512503 156 ntBASIC-0.8□□□□□ -2.54
LIM2P55344 AC026421.1-201ENST00000519101 163 ntBASIC-0.8□□□□□ -2.54
LIM2P55344 MIR3179-1-201ENST00000578940 84 ntBASIC-0.8□□□□□ -2.54
LIM2P55344 MIR3179-2-201ENST00000579107 84 ntBASIC-0.8□□□□□ -2.54
LIM2P55344 MIR3179-3-201ENST00000579566 84 ntBASIC-0.8□□□□□ -2.54
LIM2P55344 MIR3179-4-201ENST00000617599 84 ntBASIC-0.8□□□□□ -2.54
LIM2P55344 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.81□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 211 ms