Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC243829.3-201ENST00000622177 108 ntBASIC0.88□□□□□ -2.27
MRE11P49959 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.87□□□□□ -2.27
MRE11P49959 RNA5SP347-201ENST00000362445 119 ntBASIC0.87□□□□□ -2.27
MRE11P49959 MIR508-201ENST00000384857 115 ntBASIC0.87□□□□□ -2.27
MRE11P49959 MIR216B-201ENST00000390186 82 ntBASIC0.87□□□□□ -2.27
MRE11P49959 AC097510.1-201ENST00000510945 133 ntBASIC0.87□□□□□ -2.27
MRE11P49959 PSMC1P5-201ENST00000512850 177 ntBASIC0.87□□□□□ -2.27
MRE11P49959 YWHAEP2-201ENST00000580066 112 ntBASIC0.87□□□□□ -2.27
MRE11P49959 YWHAEP3-201ENST00000582767 121 ntBASIC0.87□□□□□ -2.27
MRE11P49959 RNY1P8-201ENST00000383970 114 ntBASIC0.86□□□□□ -2.27
MRE11P49959 RNU6-110P-201ENST00000384508 104 ntBASIC0.86□□□□□ -2.27
MRE11P49959 RNU2-59P-201ENST00000410482 191 ntBASIC0.86□□□□□ -2.27
MRE11P49959 RNA5SP227-201ENST00000516184 113 ntBASIC0.86□□□□□ -2.27
MRE11P49959 RNU6-303P-201ENST00000517091 106 ntBASIC0.86□□□□□ -2.27
MRE11P49959 MIR5589-201ENST00000579442 60 ntBASIC0.86□□□□□ -2.27
MRE11P49959 MIR6835-201ENST00000621552 64 ntBASIC0.86□□□□□ -2.27
MRE11P49959 RNU6-1177P-201ENST00000391058 104 ntBASIC0.85□□□□□ -2.27
MRE11P49959 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.85□□□□□ -2.27
MRE11P49959 AC093423.1-201ENST00000440817 142 ntBASIC0.85□□□□□ -2.27
MRE11P49959 RNA5SP268-201ENST00000516828 124 ntBASIC0.85□□□□□ -2.27
MRE11P49959 RNU6-824P-201ENST00000363724 104 ntBASIC0.84□□□□□ -2.27
MRE11P49959 RNU6-340P-201ENST00000364005 107 ntBASIC0.84□□□□□ -2.27
MRE11P49959 Y_RNA.371-201ENST00000365591 113 ntBASIC0.84□□□□□ -2.27
MRE11P49959 SNORA36.2-201ENST00000384004 127 ntBASIC0.84□□□□□ -2.27
MRE11P49959 RNU6-269P-201ENST00000391077 97 ntBASIC0.84□□□□□ -2.27
MRE11P49959 Y_RNA.606-201ENST00000410579 103 ntBASIC0.84□□□□□ -2.27
MRE11P49959 SNORA62.5-201ENST00000516634 120 ntBASIC0.84□□□□□ -2.27
MRE11P49959 AC145423.2-201ENST00000610631 239 ntBASIC0.84□□□□□ -2.27
MRE11P49959 U6.81-201ENST00000612550 106 ntBASIC0.84□□□□□ -2.27
MRE11P49959 MIR548O2-201ENST00000616090 70 ntBASIC0.84□□□□□ -2.27
MRE11P49959 AL162376.1-201ENST00000624117 175 ntBASIC0.84□□□□□ -2.27
MRE11P49959 SNORA8.2-201ENST00000384372 139 ntBASIC0.83□□□□□ -2.28
MRE11P49959 MIR329-2-201ENST00000385029 84 ntBASIC0.83□□□□□ -2.28
MRE11P49959 RNA5SP63-201ENST00000391225 112 ntBASIC0.83□□□□□ -2.28
MRE11P49959 AC074348.1-201ENST00000426503 132 ntBASIC0.83□□□□□ -2.28
MRE11P49959 SCARNA18B-201ENST00000458806 135 ntBASIC0.83□□□□□ -2.28
MRE11P49959 MIR4484-201ENST00000582855 83 ntBASIC0.83□□□□□ -2.28
MRE11P49959 MIR7107-201ENST00000611489 80 ntBASIC0.83□□□□□ -2.28
MRE11P49959 MIR1297-201ENST00000637311 77 ntBASIC0.83□□□□□ -2.28
MRE11P49959 MIR4662A-201ENST00000637499 67 ntBASIC0.83□□□□□ -2.28
MRE11P49959 MIR6866-201ENST00000638146 69 ntBASIC0.83□□□□□ -2.28
MRE11P49959 MIR140-201ENST00000385282 100 ntBASIC0.82□□□□□ -2.28
MRE11P49959 RNU6-807P-201ENST00000516805 107 ntBASIC0.82□□□□□ -2.28
MRE11P49959 U7.4-201ENST00000614961 63 ntBASIC0.82□□□□□ -2.28
MRE11P49959 Y_RNA.788-201ENST00000622394 112 ntBASIC0.82□□□□□ -2.28
MRE11P49959 RNU6-776P-201ENST00000364403 104 ntBASIC0.81□□□□□ -2.28
MRE11P49959 RNU1-141P-201ENST00000364623 158 ntBASIC0.81□□□□□ -2.28
MRE11P49959 RNU6-1022P-201ENST00000365049 104 ntBASIC0.81□□□□□ -2.28
MRE11P49959 MIR889-201ENST00000401280 79 ntBASIC0.8□□□□□ -2.28
MRE11P49959 RNA5SP25-201ENST00000410815 110 ntBASIC0.8□□□□□ -2.28
MRE11P49959 RNA5SP484-201ENST00000458857 111 ntBASIC0.8□□□□□ -2.28
MRE11P49959 MIR4802-201ENST00000581881 80 ntBASIC0.8□□□□□ -2.28
MRE11P49959 RNU6-681P-201ENST00000364012 104 ntBASIC0.79□□□□□ -2.28
MRE11P49959 RNA5SP517-201ENST00000364724 117 ntBASIC0.79□□□□□ -2.28
MRE11P49959 RNU6-382P-201ENST00000365181 106 ntBASIC0.79□□□□□ -2.28
MRE11P49959 MT-TY-201ENST00000387409 66 ntBASIC0.79□□□□□ -2.28
MRE11P49959 MIR4460-201ENST00000577862 86 ntBASIC0.79□□□□□ -2.28
MRE11P49959 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.79□□□□□ -2.28
MRE11P49959 RNU6-54P-201ENST00000365563 107 ntBASIC0.78□□□□□ -2.28
MRE11P49959 RNU6-1296P-201ENST00000383879 107 ntBASIC0.78□□□□□ -2.28
MRE11P49959 RNU6V-201ENST00000384105 107 ntBASIC0.78□□□□□ -2.28
MRE11P49959 RNU6-154P-201ENST00000384306 106 ntBASIC0.78□□□□□ -2.28
MRE11P49959 MIR4723-201ENST00000585070 81 ntBASIC0.78□□□□□ -2.28
MRE11P49959 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.78□□□□□ -2.28
MRE11P49959 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.78□□□□□ -2.28
MRE11P49959 MIR5087-201ENST00000635826 76 ntBASIC0.78□□□□□ -2.28
MRE11P49959 MIR4773-1-201ENST00000637203 78 ntBASIC0.78□□□□□ -2.28
MRE11P49959 RNU6-495P-201ENST00000362995 107 ntBASIC0.77□□□□□ -2.29
MRE11P49959 SNORA2A-201ENST00000383885 135 ntBASIC0.77□□□□□ -2.29
MRE11P49959 SNORD75.2-201ENST00000408784 58 ntBASIC0.77□□□□□ -2.29
MRE11P49959 RNU7-24P-201ENST00000458867 62 ntBASIC0.77□□□□□ -2.29
MRE11P49959 MIR4514-201ENST00000581410 57 ntBASIC0.77□□□□□ -2.29
MRE11P49959 AC092634.7-201ENST00000621022 103 ntBASIC0.77□□□□□ -2.29
MRE11P49959 RNU6-330P-201ENST00000363015 107 ntBASIC0.76□□□□□ -2.29
MRE11P49959 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.76□□□□□ -2.29
MRE11P49959 NAMPTP3-201ENST00000569273 224 ntBASIC0.76□□□□□ -2.29
MRE11P49959 MIR3134-201ENST00000579433 74 ntBASIC0.76□□□□□ -2.29
MRE11P49959 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
MRE11P49959 AC073869.9-201ENST00000641610 120 ntBASIC0.76□□□□□ -2.29
MRE11P49959 AC069503.3-201ENST00000618674 145 ntBASIC0.75□□□□□ -2.29
MRE11P49959 MIR409-201ENST00000362237 79 ntBASIC0.74□□□□□ -2.29
MRE11P49959 Z95118.1-201ENST00000421372 247 ntBASIC0.74□□□□□ -2.29
MRE11P49959 RNU6-274P-201ENST00000459566 107 ntBASIC0.74□□□□□ -2.29
MRE11P49959 SNORA25.18-201ENST00000607153 114 ntBASIC0.74□□□□□ -2.29
MRE11P49959 SNORA8.1-201ENST00000384250 140 ntBASIC0.73□□□□□ -2.29
MRE11P49959 SNORD42B-201ENST00000458893 67 ntBASIC0.73□□□□□ -2.29
MRE11P49959 RNU5B-6P-201ENST00000516765 68 ntBASIC0.73□□□□□ -2.29
MRE11P49959 MIR4752-201ENST00000579672 72 ntBASIC0.73□□□□□ -2.29
MRE11P49959 MIR664A-201ENST00000626086 82 ntBASIC0.73□□□□□ -2.29
MRE11P49959 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
MRE11P49959 SNORD118-201ENST00000363593 134 ntBASIC0.72□□□□□ -2.29
MRE11P49959 SNORA40.8-201ENST00000411034 126 ntBASIC0.72□□□□□ -2.29
MRE11P49959 AC006210.1-201ENST00000424882 111 ntBASIC0.72□□□□□ -2.29
MRE11P49959 RNU6-229P-201ENST00000516614 102 ntBASIC0.72□□□□□ -2.29
MRE11P49959 SNORA9.1-201ENST00000362412 131 ntBASIC0.71□□□□□ -2.3
MRE11P49959 SNORD114-15-201ENST00000364687 72 ntBASIC0.71□□□□□ -2.3
MRE11P49959 MIR92A1-201ENST00000385233 78 ntBASIC0.71□□□□□ -2.3
MRE11P49959 AC069271.1-201ENST00000445577 156 ntBASIC0.71□□□□□ -2.3
MRE11P49959 RNU6-752P-201ENST00000516376 102 ntBASIC0.71□□□□□ -2.3
MRE11P49959 RNU6-70P-201ENST00000516438 60 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 267.4 ms