Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.29□□□□□ -2.46
KRT3P12035 MIR582-201ENST00000365731 98 ntBASIC-0.29□□□□□ -2.46
KRT3P12035 SNORD116-14-201ENST00000383894 92 ntBASIC-0.29□□□□□ -2.46
KRT3P12035 SNORD116-17-201ENST00000383929 92 ntBASIC-0.29□□□□□ -2.46
KRT3P12035 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.29□□□□□ -2.46
KRT3P12035 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.29□□□□□ -2.46
KRT3P12035 SNORD116-15-201ENST00000384445 92 ntBASIC-0.29□□□□□ -2.46
KRT3P12035 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.29□□□□□ -2.46
KRT3P12035 SNORD56B-201ENST00000384713 71 ntBASIC-0.29□□□□□ -2.46
KRT3P12035 SNORD116-19-201ENST00000384729 92 ntBASIC-0.29□□□□□ -2.46
KRT3P12035 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
KRT3P12035 MIR548E-201ENST00000408287 88 ntBASIC-0.29□□□□□ -2.46
KRT3P12035 RNU6-519P-201ENST00000410590 108 ntBASIC-0.29□□□□□ -2.46
KRT3P12035 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.29□□□□□ -2.46
KRT3P12035 SNORD42B-201ENST00000458893 67 ntBASIC-0.29□□□□□ -2.46
KRT3P12035 SNORD4B-201ENST00000459083 72 ntBASIC-0.29□□□□□ -2.46
KRT3P12035 RNU6-719P-201ENST00000516671 104 ntBASIC-0.29□□□□□ -2.46
KRT3P12035 MIR3064-201ENST00000581130 66 ntBASIC-0.29□□□□□ -2.46
KRT3P12035 MIR4777-201ENST00000583710 86 ntBASIC-0.29□□□□□ -2.46
KRT3P12035 AC104996.3-201ENST00000590718 94 ntBASIC-0.29□□□□□ -2.46
KRT3P12035 SNORD114-14-201ENST00000362723 75 ntBASIC-0.3□□□□□ -2.46
KRT3P12035 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.3□□□□□ -2.46
KRT3P12035 RNU6-209P-201ENST00000384118 107 ntBASIC-0.3□□□□□ -2.46
KRT3P12035 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.3□□□□□ -2.46
KRT3P12035 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.3□□□□□ -2.46
KRT3P12035 SNORD116-21-201ENST00000384507 92 ntBASIC-0.3□□□□□ -2.46
KRT3P12035 MIR548I1-201ENST00000408810 149 ntBASIC-0.3□□□□□ -2.46
KRT3P12035 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.3□□□□□ -2.46
KRT3P12035 AL445193.1-201ENST00000441183 141 ntBASIC-0.3□□□□□ -2.46
KRT3P12035 RNU6-62P-201ENST00000516526 102 ntBASIC-0.3□□□□□ -2.46
KRT3P12035 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.3□□□□□ -2.46
KRT3P12035 RNU6-495P-201ENST00000362995 107 ntBASIC-0.31□□□□□ -2.46
KRT3P12035 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.31□□□□□ -2.46
KRT3P12035 RNU6-973P-201ENST00000364690 107 ntBASIC-0.31□□□□□ -2.46
KRT3P12035 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.31□□□□□ -2.46
KRT3P12035 MIR204-201ENST00000385200 110 ntBASIC-0.31□□□□□ -2.46
KRT3P12035 RNU6-972P-201ENST00000391208 107 ntBASIC-0.31□□□□□ -2.46
KRT3P12035 snoU13.13-201ENST00000458842 104 ntBASIC-0.31□□□□□ -2.46
KRT3P12035 SCARNA23-201ENST00000516060 130 ntBASIC-0.31□□□□□ -2.46
KRT3P12035 RNU6-795P-201ENST00000516323 103 ntBASIC-0.31□□□□□ -2.46
KRT3P12035 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.31□□□□□ -2.46
KRT3P12035 RNY1P9-201ENST00000532431 109 ntBASIC-0.31□□□□□ -2.46
KRT3P12035 MIR3671-201ENST00000580455 88 ntBASIC-0.31□□□□□ -2.46
KRT3P12035 MIR4280-201ENST00000582178 76 ntBASIC-0.31□□□□□ -2.46
KRT3P12035 MIR3140-201ENST00000583685 90 ntBASIC-0.31□□□□□ -2.46
KRT3P12035 MIR548Z-201ENST00000584743 97 ntBASIC-0.31□□□□□ -2.46
KRT3P12035 AC012531.4-201ENST00000616509 177 ntBASIC-0.31□□□□□ -2.46
KRT3P12035 MIR6851-201ENST00000617060 67 ntBASIC-0.31□□□□□ -2.46
KRT3P12035 RNU6-502P-201ENST00000362419 108 ntBASIC-0.32□□□□□ -2.46
KRT3P12035 RNU6-704P-201ENST00000364162 103 ntBASIC-0.32□□□□□ -2.46
KRT3P12035 SNORA63.6-201ENST00000364921 119 ntBASIC-0.32□□□□□ -2.46
KRT3P12035 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.32□□□□□ -2.46
KRT3P12035 SNORA24B-201ENST00000384176 131 ntBASIC-0.32□□□□□ -2.46
KRT3P12035 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.32□□□□□ -2.46
KRT3P12035 SNORD75.2-201ENST00000408784 58 ntBASIC-0.32□□□□□ -2.46
KRT3P12035 SNORA13-201ENST00000458790 133 ntBASIC-0.32□□□□□ -2.46
KRT3P12035 RNU7-24P-201ENST00000458867 62 ntBASIC-0.32□□□□□ -2.46
KRT3P12035 AC021146.6-201ENST00000514659 117 ntBASIC-0.32□□□□□ -2.46
KRT3P12035 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.32□□□□□ -2.46
KRT3P12035 RNU6-904P-201ENST00000516206 101 ntBASIC-0.32□□□□□ -2.46
KRT3P12035 SNORD38.3-201ENST00000516599 73 ntBASIC-0.32□□□□□ -2.46
KRT3P12035 MIR3668-201ENST00000582138 75 ntBASIC-0.32□□□□□ -2.46
KRT3P12035 MIR3133-201ENST00000583157 78 ntBASIC-0.32□□□□□ -2.46
KRT3P12035 SNORD58A-201ENST00000383875 65 ntBASIC-0.33□□□□□ -2.46
KRT3P12035 RNU6-746P-201ENST00000384112 109 ntBASIC-0.33□□□□□ -2.46
KRT3P12035 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.33□□□□□ -2.46
KRT3P12035 RNU6-476P-201ENST00000384726 107 ntBASIC-0.33□□□□□ -2.46
KRT3P12035 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.33□□□□□ -2.46
KRT3P12035 RNU6-721P-201ENST00000410155 105 ntBASIC-0.33□□□□□ -2.46
KRT3P12035 RNU6-887P-201ENST00000410660 100 ntBASIC-0.33□□□□□ -2.46
KRT3P12035 MTATP6P29-201ENST00000415057 132 ntBASIC-0.33□□□□□ -2.46
KRT3P12035 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.33□□□□□ -2.46
KRT3P12035 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.33□□□□□ -2.46
KRT3P12035 AC097510.1-201ENST00000510945 133 ntBASIC-0.33□□□□□ -2.46
KRT3P12035 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.33□□□□□ -2.46
KRT3P12035 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.33□□□□□ -2.46
KRT3P12035 SNORD116-10-201ENST00000363791 102 ntBASIC-0.34□□□□□ -2.46
KRT3P12035 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.34□□□□□ -2.46
KRT3P12035 RNU6-959P-201ENST00000384671 107 ntBASIC-0.34□□□□□ -2.46
KRT3P12035 MIR196A1-201ENST00000388006 70 ntBASIC-0.34□□□□□ -2.46
KRT3P12035 RNA5SP292-201ENST00000390974 118 ntBASIC-0.34□□□□□ -2.46
KRT3P12035 MIR1302-5-201ENST00000408164 150 ntBASIC-0.34□□□□□ -2.46
KRT3P12035 AL500527.2-201ENST00000454105 95 ntBASIC-0.34□□□□□ -2.46
KRT3P12035 SNORA18.5-201ENST00000516616 101 ntBASIC-0.34□□□□□ -2.46
KRT3P12035 AC006254.2-201ENST00000603259 279 ntBASIC-0.34□□□□□ -2.46
KRT3P12035 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.34□□□□□ -2.46
KRT3P12035 MIR6773-201ENST00000612812 74 ntBASIC-0.34□□□□□ -2.46
KRT3P12035 RNU5F-1-201ENST00000362507 117 ntBASIC-0.35□□□□□ -2.47
KRT3P12035 SNORD114-25-201ENST00000363742 72 ntBASIC-0.35□□□□□ -2.47
KRT3P12035 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.35□□□□□ -2.47
KRT3P12035 MIR518B-201ENST00000385127 83 ntBASIC-0.35□□□□□ -2.47
KRT3P12035 MIRLET7B-201ENST00000385140 83 ntBASIC-0.35□□□□□ -2.47
KRT3P12035 SNORA19.1-201ENST00000410656 129 ntBASIC-0.35□□□□□ -2.47
KRT3P12035 AC008267.6-201ENST00000441664 139 ntBASIC-0.35□□□□□ -2.47
KRT3P12035 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.35□□□□□ -2.47
KRT3P12035 MIR5704-201ENST00000584029 77 ntBASIC-0.35□□□□□ -2.47
KRT3P12035 MIR6854-201ENST00000614935 69 ntBASIC-0.35□□□□□ -2.47
KRT3P12035 RNU6-774P-201ENST00000363238 107 ntBASIC-0.36□□□□□ -2.47
KRT3P12035 RNU4-32P-201ENST00000363404 141 ntBASIC-0.36□□□□□ -2.47
KRT3P12035 RNU6-990P-201ENST00000364385 104 ntBASIC-0.36□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 212.8 ms