Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 RNU6-519P-201ENST00000410590 108 ntBASIC-0.38□□□□□ -2.47
TRAV40A0A0B4J280 RNU7-61P-201ENST00000515897 61 ntBASIC-0.38□□□□□ -2.47
TRAV40A0A0B4J280 MIR4645-201ENST00000583158 77 ntBASIC-0.38□□□□□ -2.47
TRAV40A0A0B4J280 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.38□□□□□ -2.47
TRAV40A0A0B4J280 SNORD115-25-201ENST00000362619 82 ntBASIC-0.39□□□□□ -2.47
TRAV40A0A0B4J280 RNU4-32P-201ENST00000363404 141 ntBASIC-0.39□□□□□ -2.47
TRAV40A0A0B4J280 MIR196A2-201ENST00000385189 110 ntBASIC-0.39□□□□□ -2.47
TRAV40A0A0B4J280 MIR216B-201ENST00000390186 82 ntBASIC-0.39□□□□□ -2.47
TRAV40A0A0B4J280 snoU13.17-201ENST00000458802 104 ntBASIC-0.39□□□□□ -2.47
TRAV40A0A0B4J280 SNORA40.17-201ENST00000517256 115 ntBASIC-0.39□□□□□ -2.47
TRAV40A0A0B4J280 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.4□□□□□ -2.47
TRAV40A0A0B4J280 RNU6-495P-201ENST00000362995 107 ntBASIC-0.4□□□□□ -2.47
TRAV40A0A0B4J280 SNORD114-28-201ENST00000363610 72 ntBASIC-0.4□□□□□ -2.47
TRAV40A0A0B4J280 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.4□□□□□ -2.47
TRAV40A0A0B4J280 RNU6-81P-201ENST00000365608 104 ntBASIC-0.4□□□□□ -2.47
TRAV40A0A0B4J280 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.4□□□□□ -2.47
TRAV40A0A0B4J280 MIR4280-201ENST00000582178 76 ntBASIC-0.4□□□□□ -2.47
TRAV40A0A0B4J280 MIR5704-201ENST00000584029 77 ntBASIC-0.4□□□□□ -2.47
TRAV40A0A0B4J280 RNU6-502P-201ENST00000362419 108 ntBASIC-0.41□□□□□ -2.48
TRAV40A0A0B4J280 RNU6-900P-201ENST00000384498 102 ntBASIC-0.41□□□□□ -2.48
TRAV40A0A0B4J280 MIR548U-201ENST00000390728 81 ntBASIC-0.41□□□□□ -2.48
TRAV40A0A0B4J280 MIR1265-201ENST00000408444 86 ntBASIC-0.41□□□□□ -2.48
TRAV40A0A0B4J280 RNU6-887P-201ENST00000410660 100 ntBASIC-0.41□□□□□ -2.48
TRAV40A0A0B4J280 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.41□□□□□ -2.48
TRAV40A0A0B4J280 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.41□□□□□ -2.48
TRAV40A0A0B4J280 AC114755.3-201ENST00000481111 251 ntBASIC-0.41□□□□□ -2.48
TRAV40A0A0B4J280 SNORD38.3-201ENST00000516599 73 ntBASIC-0.41□□□□□ -2.48
TRAV40A0A0B4J280 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.41□□□□□ -2.48
TRAV40A0A0B4J280 MIR4493-201ENST00000584016 73 ntBASIC-0.41□□□□□ -2.48
TRAV40A0A0B4J280 MIR6086-201ENST00000638065 55 ntBASIC-0.41□□□□□ -2.48
TRAV40A0A0B4J280 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.42□□□□□ -2.48
TRAV40A0A0B4J280 RNU6-337P-201ENST00000391243 106 ntBASIC-0.42□□□□□ -2.48
TRAV40A0A0B4J280 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.42□□□□□ -2.48
TRAV40A0A0B4J280 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.42□□□□□ -2.48
TRAV40A0A0B4J280 RNU7-55P-201ENST00000459426 62 ntBASIC-0.42□□□□□ -2.48
TRAV40A0A0B4J280 SNORD126-201ENST00000459475 77 ntBASIC-0.42□□□□□ -2.48
TRAV40A0A0B4J280 RNU6-412P-201ENST00000516434 106 ntBASIC-0.42□□□□□ -2.48
TRAV40A0A0B4J280 RNA5SP66-201ENST00000517178 101 ntBASIC-0.42□□□□□ -2.48
TRAV40A0A0B4J280 MIR4263-201ENST00000584745 83 ntBASIC-0.42□□□□□ -2.48
TRAV40A0A0B4J280 MIR8068-201ENST00000618032 68 ntBASIC-0.42□□□□□ -2.48
TRAV40A0A0B4J280 RNU6-824P-201ENST00000363724 104 ntBASIC-0.43□□□□□ -2.48
TRAV40A0A0B4J280 RNA5SP275-201ENST00000363936 118 ntBASIC-0.43□□□□□ -2.48
TRAV40A0A0B4J280 AC008267.6-201ENST00000441664 139 ntBASIC-0.43□□□□□ -2.48
TRAV40A0A0B4J280 RNU7-153P-201ENST00000516455 62 ntBASIC-0.43□□□□□ -2.48
TRAV40A0A0B4J280 MIR4432-201ENST00000581823 84 ntBASIC-0.43□□□□□ -2.48
TRAV40A0A0B4J280 AC090617.8-201ENST00000623339 167 ntBASIC-0.43□□□□□ -2.48
TRAV40A0A0B4J280 RNU6-382P-201ENST00000365181 106 ntBASIC-0.44□□□□□ -2.48
TRAV40A0A0B4J280 MIR203A-201ENST00000384836 110 ntBASIC-0.44□□□□□ -2.48
TRAV40A0A0B4J280 RNU6-972P-201ENST00000391208 107 ntBASIC-0.44□□□□□ -2.48
TRAV40A0A0B4J280 MIR548M-201ENST00000408260 86 ntBASIC-0.44□□□□□ -2.48
TRAV40A0A0B4J280 AC096531.1-201ENST00000419107 107 ntBASIC-0.44□□□□□ -2.48
TRAV40A0A0B4J280 RNU6-589P-201ENST00000516485 107 ntBASIC-0.44□□□□□ -2.48
TRAV40A0A0B4J280 RNA5SP476-201ENST00000516613 103 ntBASIC-0.44□□□□□ -2.48
TRAV40A0A0B4J280 MIR4436A-201ENST00000585278 85 ntBASIC-0.44□□□□□ -2.48
TRAV40A0A0B4J280 U7.3-201ENST00000616123 62 ntBASIC-0.44□□□□□ -2.48
TRAV40A0A0B4J280 MIR101-1-201ENST00000362265 75 ntBASIC-0.45□□□□□ -2.48
TRAV40A0A0B4J280 SNORD115-27-201ENST00000364430 82 ntBASIC-0.45□□□□□ -2.48
TRAV40A0A0B4J280 RNU6-22P-201ENST00000384355 107 ntBASIC-0.45□□□□□ -2.48
TRAV40A0A0B4J280 RNU6-901P-201ENST00000384593 106 ntBASIC-0.45□□□□□ -2.48
TRAV40A0A0B4J280 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.45□□□□□ -2.48
TRAV40A0A0B4J280 MIR6773-201ENST00000612812 74 ntBASIC-0.45□□□□□ -2.48
TRAV40A0A0B4J280 SNORD114-4-201ENST00000363962 75 ntBASIC-0.46□□□□□ -2.48
TRAV40A0A0B4J280 SNORD14C-201ENST00000365382 88 ntBASIC-0.46□□□□□ -2.48
TRAV40A0A0B4J280 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.46□□□□□ -2.48
TRAV40A0A0B4J280 MIR1302-5-201ENST00000408164 150 ntBASIC-0.46□□□□□ -2.48
TRAV40A0A0B4J280 RNU6-284P-201ENST00000411105 106 ntBASIC-0.46□□□□□ -2.48
TRAV40A0A0B4J280 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.46□□□□□ -2.48
TRAV40A0A0B4J280 RNU6-758P-201ENST00000516292 89 ntBASIC-0.46□□□□□ -2.48
TRAV40A0A0B4J280 RNU6-62P-201ENST00000516526 102 ntBASIC-0.46□□□□□ -2.48
TRAV40A0A0B4J280 MIR8064-201ENST00000612863 90 ntBASIC-0.46□□□□□ -2.48
TRAV40A0A0B4J280 MIR450A1-201ENST00000362262 91 ntBASIC-0.47□□□□□ -2.48
TRAV40A0A0B4J280 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.47□□□□□ -2.48
TRAV40A0A0B4J280 SNORD75.2-201ENST00000408784 58 ntBASIC-0.47□□□□□ -2.48
TRAV40A0A0B4J280 Z95118.1-201ENST00000421372 247 ntBASIC-0.47□□□□□ -2.48
TRAV40A0A0B4J280 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.47□□□□□ -2.48
TRAV40A0A0B4J280 RNA5SP147-201ENST00000516493 109 ntBASIC-0.47□□□□□ -2.48
TRAV40A0A0B4J280 MIR4773-1-201ENST00000637203 78 ntBASIC-0.47□□□□□ -2.48
TRAV40A0A0B4J280 AC093726.3-201ENST00000637588 150 ntBASIC-0.47□□□□□ -2.48
TRAV40A0A0B4J280 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.48□□□□□ -2.49
TRAV40A0A0B4J280 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.48□□□□□ -2.49
TRAV40A0A0B4J280 SNORA63.6-201ENST00000364921 119 ntBASIC-0.48□□□□□ -2.49
TRAV40A0A0B4J280 MIR604-201ENST00000384880 94 ntBASIC-0.48□□□□□ -2.49
TRAV40A0A0B4J280 MIR4796-201ENST00000580742 81 ntBASIC-0.48□□□□□ -2.49
TRAV40A0A0B4J280 MIR3910-1-201ENST00000580936 111 ntBASIC-0.48□□□□□ -2.49
TRAV40A0A0B4J280 MIR6851-201ENST00000617060 67 ntBASIC-0.48□□□□□ -2.49
TRAV40A0A0B4J280 AL391099.1-201ENST00000624635 187 ntBASIC-0.48□□□□□ -2.49
TRAV40A0A0B4J280 RNA5SP368-201ENST00000364298 116 ntBASIC-0.49□□□□□ -2.49
TRAV40A0A0B4J280 RNU6-973P-201ENST00000364690 107 ntBASIC-0.49□□□□□ -2.49
TRAV40A0A0B4J280 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.49□□□□□ -2.49
TRAV40A0A0B4J280 MIRLET7B-201ENST00000385140 83 ntBASIC-0.49□□□□□ -2.49
TRAV40A0A0B4J280 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.49□□□□□ -2.49
TRAV40A0A0B4J280 RNU7-24P-201ENST00000458867 62 ntBASIC-0.49□□□□□ -2.49
TRAV40A0A0B4J280 AC021146.9-201ENST00000512503 156 ntBASIC-0.49□□□□□ -2.49
TRAV40A0A0B4J280 SNORD116-10-201ENST00000363791 102 ntBASIC-0.5□□□□□ -2.49
TRAV40A0A0B4J280 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.5□□□□□ -2.49
TRAV40A0A0B4J280 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.5□□□□□ -2.49
TRAV40A0A0B4J280 MTATP6P29-201ENST00000415057 132 ntBASIC-0.5□□□□□ -2.49
TRAV40A0A0B4J280 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.5□□□□□ -2.49
TRAV40A0A0B4J280 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.5□□□□□ -2.49
TRAV40A0A0B4J280 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.51□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 185.5 ms