Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 SNORA36.2-201ENST00000384004 127 ntBASIC0.8□□□□□ -2.28
TIMP4Q99727 MIR617-201ENST00000385030 97 ntBASIC0.8□□□□□ -2.28
TIMP4Q99727 MIR548J-201ENST00000408833 112 ntBASIC0.8□□□□□ -2.28
TIMP4Q99727 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.8□□□□□ -2.28
TIMP4Q99727 Y_RNA.660-201ENST00000516002 120 ntBASIC0.8□□□□□ -2.28
TIMP4Q99727 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.8□□□□□ -2.28
TIMP4Q99727 MIR4698-201ENST00000577795 80 ntBASIC0.8□□□□□ -2.28
TIMP4Q99727 RNU6-726P-201ENST00000364680 107 ntBASIC0.79□□□□□ -2.28
TIMP4Q99727 MIR519E-201ENST00000385075 84 ntBASIC0.79□□□□□ -2.28
TIMP4Q99727 ACA64.5-201ENST00000516207 127 ntBASIC0.79□□□□□ -2.28
TIMP4Q99727 SCARNA16.5-201ENST00000517114 183 ntBASIC0.79□□□□□ -2.28
TIMP4Q99727 MIR6734-201ENST00000621166 68 ntBASIC0.79□□□□□ -2.28
TIMP4Q99727 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.79□□□□□ -2.28
TIMP4Q99727 RNY1P8-201ENST00000383970 114 ntBASIC0.78□□□□□ -2.28
TIMP4Q99727 snoU13.18-201ENST00000459483 104 ntBASIC0.78□□□□□ -2.28
TIMP4Q99727 RNA5SP227-201ENST00000516184 113 ntBASIC0.78□□□□□ -2.28
TIMP4Q99727 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.78□□□□□ -2.28
TIMP4Q99727 MIR151B-201ENST00000584249 96 ntBASIC0.78□□□□□ -2.28
TIMP4Q99727 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.78□□□□□ -2.28
TIMP4Q99727 Y_RNA.118-201ENST00000363300 101 ntBASIC0.77□□□□□ -2.29
TIMP4Q99727 SNORD41.1-201ENST00000391000 69 ntBASIC0.77□□□□□ -2.29
TIMP4Q99727 U3.27-201ENST00000391237 200 ntBASIC0.77□□□□□ -2.29
TIMP4Q99727 RNU6-1223P-201ENST00000517124 104 ntBASIC0.77□□□□□ -2.29
TIMP4Q99727 YWHAEP2-201ENST00000580066 112 ntBASIC0.77□□□□□ -2.29
TIMP4Q99727 YWHAEP3-201ENST00000582767 121 ntBASIC0.77□□□□□ -2.29
TIMP4Q99727 MIR4662A-201ENST00000637499 67 ntBASIC0.77□□□□□ -2.29
TIMP4Q99727 SNORA36.1-201ENST00000363424 132 ntBASIC0.76□□□□□ -2.29
TIMP4Q99727 SNORA24B-201ENST00000384176 131 ntBASIC0.76□□□□□ -2.29
TIMP4Q99727 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
TIMP4Q99727 RNU6-1177P-201ENST00000391058 104 ntBASIC0.76□□□□□ -2.29
TIMP4Q99727 RNU7-74P-201ENST00000459104 62 ntBASIC0.76□□□□□ -2.29
TIMP4Q99727 AC097510.1-201ENST00000510945 133 ntBASIC0.76□□□□□ -2.29
TIMP4Q99727 RNU6-351P-201ENST00000516097 100 ntBASIC0.76□□□□□ -2.29
TIMP4Q99727 RNA5SP268-201ENST00000516828 124 ntBASIC0.76□□□□□ -2.29
TIMP4Q99727 RNA5SP94-201ENST00000516917 108 ntBASIC0.76□□□□□ -2.29
TIMP4Q99727 CYP3A137P-201ENST00000562436 69 ntBASIC0.76□□□□□ -2.29
TIMP4Q99727 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
TIMP4Q99727 RNU6-824P-201ENST00000363724 104 ntBASIC0.75□□□□□ -2.29
TIMP4Q99727 RNU6-776P-201ENST00000364403 104 ntBASIC0.75□□□□□ -2.29
TIMP4Q99727 RNU6-1022P-201ENST00000365049 104 ntBASIC0.75□□□□□ -2.29
TIMP4Q99727 Y_RNA.532-201ENST00000384590 113 ntBASIC0.75□□□□□ -2.29
TIMP4Q99727 MIR608-201ENST00000384820 100 ntBASIC0.75□□□□□ -2.29
TIMP4Q99727 RNU6-269P-201ENST00000391077 97 ntBASIC0.75□□□□□ -2.29
TIMP4Q99727 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.75□□□□□ -2.29
TIMP4Q99727 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.75□□□□□ -2.29
TIMP4Q99727 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.75□□□□□ -2.29
TIMP4Q99727 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.75□□□□□ -2.29
TIMP4Q99727 SCARNA18B-201ENST00000458806 135 ntBASIC0.75□□□□□ -2.29
TIMP4Q99727 U7.4-201ENST00000614961 63 ntBASIC0.75□□□□□ -2.29
TIMP4Q99727 MIR7111-201ENST00000619751 72 ntBASIC0.75□□□□□ -2.29
TIMP4Q99727 MIR4773-1-201ENST00000637203 78 ntBASIC0.75□□□□□ -2.29
TIMP4Q99727 RNU6-340P-201ENST00000364005 107 ntBASIC0.74□□□□□ -2.29
TIMP4Q99727 RNU4-45P-201ENST00000365469 141 ntBASIC0.74□□□□□ -2.29
TIMP4Q99727 RNU6-807P-201ENST00000516805 107 ntBASIC0.74□□□□□ -2.29
TIMP4Q99727 RNU6-303P-201ENST00000517091 106 ntBASIC0.74□□□□□ -2.29
TIMP4Q99727 AC145423.2-201ENST00000610631 239 ntBASIC0.74□□□□□ -2.29
TIMP4Q99727 AC022709.1-201ENST00000615967 87 ntBASIC0.74□□□□□ -2.29
TIMP4Q99727 Y_RNA.788-201ENST00000622394 112 ntBASIC0.74□□□□□ -2.29
TIMP4Q99727 MIR489-201ENST00000384923 84 ntBASIC0.73□□□□□ -2.29
TIMP4Q99727 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
TIMP4Q99727 MIR4460-201ENST00000577862 86 ntBASIC0.73□□□□□ -2.29
TIMP4Q99727 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.73□□□□□ -2.29
TIMP4Q99727 MIR6828-201ENST00000636181 60 ntBASIC0.73□□□□□ -2.29
TIMP4Q99727 SNORD114-2-201ENST00000363953 78 ntBASIC0.72□□□□□ -2.29
TIMP4Q99727 RNU6V-201ENST00000384105 107 ntBASIC0.72□□□□□ -2.29
TIMP4Q99727 MIR216B-201ENST00000390186 82 ntBASIC0.72□□□□□ -2.29
TIMP4Q99727 RNU2-59P-201ENST00000410482 191 ntBASIC0.72□□□□□ -2.29
TIMP4Q99727 MIR4653-201ENST00000585107 83 ntBASIC0.72□□□□□ -2.29
TIMP4Q99727 RNU6-330P-201ENST00000363015 107 ntBASIC0.71□□□□□ -2.3
TIMP4Q99727 RNU6-681P-201ENST00000364012 104 ntBASIC0.71□□□□□ -2.3
TIMP4Q99727 Y_RNA.258-201ENST00000364613 105 ntBASIC0.71□□□□□ -2.3
TIMP4Q99727 RNU1-141P-201ENST00000364623 158 ntBASIC0.71□□□□□ -2.3
TIMP4Q99727 RNU6-382P-201ENST00000365181 106 ntBASIC0.71□□□□□ -2.3
TIMP4Q99727 RNU6-54P-201ENST00000365563 107 ntBASIC0.71□□□□□ -2.3
TIMP4Q99727 RNA5SP484-201ENST00000458857 111 ntBASIC0.71□□□□□ -2.3
TIMP4Q99727 PSMC1P5-201ENST00000512850 177 ntBASIC0.71□□□□□ -2.3
TIMP4Q99727 MIR7107-201ENST00000611489 80 ntBASIC0.71□□□□□ -2.3
TIMP4Q99727 MIR548O2-201ENST00000616090 70 ntBASIC0.71□□□□□ -2.3
TIMP4Q99727 MIR1297-201ENST00000637311 77 ntBASIC0.71□□□□□ -2.3
TIMP4Q99727 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
TIMP4Q99727 RNA5SP517-201ENST00000364724 117 ntBASIC0.7□□□□□ -2.3
TIMP4Q99727 SNORA8.2-201ENST00000384372 139 ntBASIC0.7□□□□□ -2.3
TIMP4Q99727 MIR146A-201ENST00000385201 99 ntBASIC0.7□□□□□ -2.3
TIMP4Q99727 MIR140-201ENST00000385282 100 ntBASIC0.7□□□□□ -2.3
TIMP4Q99727 Y_RNA.606-201ENST00000410579 103 ntBASIC0.7□□□□□ -2.3
TIMP4Q99727 NAMPTP3-201ENST00000569273 224 ntBASIC0.7□□□□□ -2.3
TIMP4Q99727 MIR5000-201ENST00000577717 103 ntBASIC0.7□□□□□ -2.3
TIMP4Q99727 MIR3134-201ENST00000579433 74 ntBASIC0.7□□□□□ -2.3
TIMP4Q99727 U6.81-201ENST00000612550 106 ntBASIC0.7□□□□□ -2.3
TIMP4Q99727 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.7□□□□□ -2.3
TIMP4Q99727 MIR664A-201ENST00000626086 82 ntBASIC0.7□□□□□ -2.3
TIMP4Q99727 SNORA8.1-201ENST00000384250 140 ntBASIC0.69□□□□□ -2.3
TIMP4Q99727 RNU6-154P-201ENST00000384306 106 ntBASIC0.69□□□□□ -2.3
TIMP4Q99727 AC074348.1-201ENST00000426503 132 ntBASIC0.69□□□□□ -2.3
TIMP4Q99727 AC093423.1-201ENST00000440817 142 ntBASIC0.69□□□□□ -2.3
TIMP4Q99727 RNU6-70P-201ENST00000516438 60 ntBASIC0.69□□□□□ -2.3
TIMP4Q99727 RNU5B-6P-201ENST00000516765 68 ntBASIC0.69□□□□□ -2.3
TIMP4Q99727 MIR4752-201ENST00000579672 72 ntBASIC0.69□□□□□ -2.3
TIMP4Q99727 SNORA25.18-201ENST00000607153 114 ntBASIC0.69□□□□□ -2.3
TIMP4Q99727 AC092634.7-201ENST00000621022 103 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 208.2 ms