Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 RNA5SP499-201ENST00000363982 119 ntBASIC0.53□□□□□ -2.32
PKP4Q99569 RNA5SP517-201ENST00000364724 117 ntBASIC0.53□□□□□ -2.32
PKP4Q99569 RNU6-945P-201ENST00000383947 107 ntBASIC0.53□□□□□ -2.32
PKP4Q99569 SNORA8.2-201ENST00000384372 139 ntBASIC0.53□□□□□ -2.32
PKP4Q99569 RNU6-1152P-201ENST00000384576 107 ntBASIC0.53□□□□□ -2.32
PKP4Q99569 Y_RNA.540-201ENST00000384638 111 ntBASIC0.53□□□□□ -2.32
PKP4Q99569 MIR216A-201ENST00000385063 110 ntBASIC0.53□□□□□ -2.32
PKP4Q99569 SNORA72.7-201ENST00000516349 94 ntBASIC0.53□□□□□ -2.32
PKP4Q99569 MIR7107-201ENST00000611489 80 ntBASIC0.53□□□□□ -2.32
PKP4Q99569 SNORD114-26-201ENST00000363543 72 ntBASIC0.52□□□□□ -2.33
PKP4Q99569 Y_RNA.388-201ENST00000383919 113 ntBASIC0.52□□□□□ -2.33
PKP4Q99569 MIR451A-201ENST00000385059 72 ntBASIC0.52□□□□□ -2.33
PKP4Q99569 MIR519E-201ENST00000385075 84 ntBASIC0.52□□□□□ -2.33
PKP4Q99569 MIR216B-201ENST00000390186 82 ntBASIC0.52□□□□□ -2.33
PKP4Q99569 U3.27-201ENST00000391237 200 ntBASIC0.52□□□□□ -2.33
PKP4Q99569 Y_RNA.607-201ENST00000410597 98 ntBASIC0.52□□□□□ -2.33
PKP4Q99569 RNU7-171P-201ENST00000459581 62 ntBASIC0.52□□□□□ -2.33
PKP4Q99569 SNORA25.13-201ENST00000516395 103 ntBASIC0.52□□□□□ -2.33
PKP4Q99569 AC140658.3-201ENST00000567603 271 ntBASIC0.52□□□□□ -2.33
PKP4Q99569 AL162376.1-201ENST00000624117 175 ntBASIC0.52□□□□□ -2.33
PKP4Q99569 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
PKP4Q99569 RNY4P3-201ENST00000365254 95 ntBASIC0.51□□□□□ -2.33
PKP4Q99569 RNU6-1276P-201ENST00000365372 104 ntBASIC0.51□□□□□ -2.33
PKP4Q99569 RNU6-1051P-201ENST00000365471 102 ntBASIC0.51□□□□□ -2.33
PKP4Q99569 RNU6-269P-201ENST00000391077 97 ntBASIC0.51□□□□□ -2.33
PKP4Q99569 SNORA40.8-201ENST00000411034 126 ntBASIC0.51□□□□□ -2.33
PKP4Q99569 RN7SL793P-201ENST00000583259 296 ntBASIC0.51□□□□□ -2.33
PKP4Q99569 MIR5087-201ENST00000635826 76 ntBASIC0.51□□□□□ -2.33
PKP4Q99569 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
PKP4Q99569 SNORA63.2-201ENST00000362603 126 ntBASIC0.5□□□□□ -2.33
PKP4Q99569 AL157398.1-201ENST00000452981 186 ntBASIC0.5□□□□□ -2.33
PKP4Q99569 RNA5SP436-201ENST00000516020 115 ntBASIC0.5□□□□□ -2.33
PKP4Q99569 SNORD118-201ENST00000363593 134 ntBASIC0.49□□□□□ -2.33
PKP4Q99569 RNA5SP173-201ENST00000364857 136 ntBASIC0.49□□□□□ -2.33
PKP4Q99569 MIR936-201ENST00000401264 98 ntBASIC0.49□□□□□ -2.33
PKP4Q99569 SNORD71-201ENST00000411292 86 ntBASIC0.49□□□□□ -2.33
PKP4Q99569 FGF7P7-201ENST00000514120 227 ntBASIC0.49□□□□□ -2.33
PKP4Q99569 SNORA25.18-201ENST00000607153 114 ntBASIC0.49□□□□□ -2.33
PKP4Q99569 AC073869.9-201ENST00000641610 120 ntBASIC0.49□□□□□ -2.33
PKP4Q99569 RNU5F-1-201ENST00000362507 117 ntBASIC0.48□□□□□ -2.33
PKP4Q99569 RNU6-624P-201ENST00000363411 107 ntBASIC0.48□□□□□ -2.33
PKP4Q99569 SNORD90-201ENST00000391145 111 ntBASIC0.48□□□□□ -2.33
PKP4Q99569 RNU6-592P-201ENST00000411333 103 ntBASIC0.48□□□□□ -2.33
PKP4Q99569 AC098934.3-201ENST00000430450 190 ntBASIC0.48□□□□□ -2.33
PKP4Q99569 AC093423.1-201ENST00000440817 142 ntBASIC0.48□□□□□ -2.33
PKP4Q99569 AC243829.3-201ENST00000622177 108 ntBASIC0.48□□□□□ -2.33
PKP4Q99569 MIR518A1-201ENST00000385068 85 ntBASIC0.47□□□□□ -2.33
PKP4Q99569 RNU6-1052P-201ENST00000411398 104 ntBASIC0.47□□□□□ -2.33
PKP4Q99569 RNU6-719P-201ENST00000516671 104 ntBASIC0.47□□□□□ -2.33
PKP4Q99569 MIR3140-201ENST00000583685 90 ntBASIC0.47□□□□□ -2.33
PKP4Q99569 SNORD114-23-201ENST00000363536 72 ntBASIC0.46□□□□□ -2.34
PKP4Q99569 RNU1-141P-201ENST00000364623 158 ntBASIC0.46□□□□□ -2.34
PKP4Q99569 RNU6-229P-201ENST00000516614 102 ntBASIC0.46□□□□□ -2.34
PKP4Q99569 MIR4666B-201ENST00000578142 81 ntBASIC0.46□□□□□ -2.34
PKP4Q99569 RNU6-573P-201ENST00000383938 106 ntBASIC0.45□□□□□ -2.34
PKP4Q99569 MIR7-2-201ENST00000384970 110 ntBASIC0.45□□□□□ -2.34
PKP4Q99569 RNU2-59P-201ENST00000410482 191 ntBASIC0.45□□□□□ -2.34
PKP4Q99569 AC069271.1-201ENST00000445577 156 ntBASIC0.45□□□□□ -2.34
PKP4Q99569 RNA5SP484-201ENST00000458857 111 ntBASIC0.45□□□□□ -2.34
PKP4Q99569 Y_RNA.660-201ENST00000516002 120 ntBASIC0.45□□□□□ -2.34
PKP4Q99569 MIR4460-201ENST00000577862 86 ntBASIC0.45□□□□□ -2.34
PKP4Q99569 MIR4711-201ENST00000578274 70 ntBASIC0.45□□□□□ -2.34
PKP4Q99569 MIR548O2-201ENST00000616090 70 ntBASIC0.45□□□□□ -2.34
PKP4Q99569 Y_RNA.219-201ENST00000364232 113 ntBASIC0.44□□□□□ -2.34
PKP4Q99569 Y_RNA.316-201ENST00000365118 111 ntBASIC0.44□□□□□ -2.34
PKP4Q99569 Y_RNA.437-201ENST00000384113 113 ntBASIC0.44□□□□□ -2.34
PKP4Q99569 SNORA24B-201ENST00000384176 131 ntBASIC0.44□□□□□ -2.34
PKP4Q99569 MT-TY-201ENST00000387409 66 ntBASIC0.44□□□□□ -2.34
PKP4Q99569 RNU6-129P-201ENST00000391022 107 ntBASIC0.44□□□□□ -2.34
PKP4Q99569 SNORD77.2-201ENST00000391045 68 ntBASIC0.44□□□□□ -2.34
PKP4Q99569 AC114737.2-201ENST00000421583 173 ntBASIC0.44□□□□□ -2.34
PKP4Q99569 AL450471.1-201ENST00000447509 127 ntBASIC0.44□□□□□ -2.34
PKP4Q99569 RNU6-557P-201ENST00000516842 110 ntBASIC0.44□□□□□ -2.34
PKP4Q99569 NAMPTP3-201ENST00000569273 224 ntBASIC0.44□□□□□ -2.34
PKP4Q99569 MIR3202-2-201ENST00000635980 79 ntBASIC0.44□□□□□ -2.34
PKP4Q99569 RNU6-208P-201ENST00000362431 107 ntBASIC0.43□□□□□ -2.34
PKP4Q99569 Y_RNA.264-201ENST00000364665 102 ntBASIC0.43□□□□□ -2.34
PKP4Q99569 SNORA50A-201ENST00000384225 134 ntBASIC0.43□□□□□ -2.34
PKP4Q99569 AC006210.1-201ENST00000424882 111 ntBASIC0.43□□□□□ -2.34
PKP4Q99569 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.43□□□□□ -2.34
PKP4Q99569 snoU13.17-201ENST00000458802 104 ntBASIC0.43□□□□□ -2.34
PKP4Q99569 AC097510.1-201ENST00000510945 133 ntBASIC0.43□□□□□ -2.34
PKP4Q99569 MIR4752-201ENST00000579672 72 ntBASIC0.43□□□□□ -2.34
PKP4Q99569 AC069503.3-201ENST00000618674 145 ntBASIC0.43□□□□□ -2.34
PKP4Q99569 AC010487.4-201ENST00000637027 61 ntBASIC0.43□□□□□ -2.34
PKP4Q99569 RNU6-161P-201ENST00000363051 106 ntBASIC0.42□□□□□ -2.34
PKP4Q99569 MIR193B-201ENST00000384907 83 ntBASIC0.42□□□□□ -2.34
PKP4Q99569 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
PKP4Q99569 RNU6-1177P-201ENST00000391058 104 ntBASIC0.42□□□□□ -2.34
PKP4Q99569 RNA5SP193-201ENST00000410353 107 ntBASIC0.42□□□□□ -2.34
PKP4Q99569 RNU6-863P-201ENST00000515989 104 ntBASIC0.42□□□□□ -2.34
PKP4Q99569 RNU6-1108P-201ENST00000516308 104 ntBASIC0.42□□□□□ -2.34
PKP4Q99569 MIR5706-201ENST00000579841 80 ntBASIC0.42□□□□□ -2.34
PKP4Q99569 RNU6-652P-201ENST00000365488 107 ntBASIC0.41□□□□□ -2.34
PKP4Q99569 RNU6-787P-201ENST00000384032 107 ntBASIC0.41□□□□□ -2.34
PKP4Q99569 SNORD110-201ENST00000408189 75 ntBASIC0.41□□□□□ -2.34
PKP4Q99569 RNU6-848P-201ENST00000515948 107 ntBASIC0.41□□□□□ -2.34
PKP4Q99569 RNU6-617P-201ENST00000516147 107 ntBASIC0.41□□□□□ -2.34
PKP4Q99569 RNU6-473P-201ENST00000516164 107 ntBASIC0.41□□□□□ -2.34
PKP4Q99569 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 256.2 ms