Protein–RNA interactions for Protein: P12814

ACTN1, Alpha-actinin-1, humanhuman

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1P12814 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.17□□□□□ -2.44
ACTN1P12814 RNU7-188P-201ENST00000517063 64 ntBASIC-0.17□□□□□ -2.44
ACTN1P12814 uc_338.10-201ENST00000621872 182 ntBASIC-0.17□□□□□ -2.44
ACTN1P12814 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.17□□□□□ -2.44
ACTN1P12814 MT-TY-201ENST00000387409 66 ntBASIC-0.18□□□□□ -2.44
ACTN1P12814 MIR4536-1-201ENST00000583537 88 ntBASIC-0.18□□□□□ -2.44
ACTN1P12814 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.18□□□□□ -2.44
ACTN1P12814 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.19□□□□□ -2.44
ACTN1P12814 RNU6-813P-201ENST00000384691 107 ntBASIC-0.19□□□□□ -2.44
ACTN1P12814 MIR876-201ENST00000401147 81 ntBASIC-0.19□□□□□ -2.44
ACTN1P12814 RNU6-935P-201ENST00000410371 100 ntBASIC-0.19□□□□□ -2.44
ACTN1P12814 RNA5SP25-201ENST00000410815 110 ntBASIC-0.19□□□□□ -2.44
ACTN1P12814 RNU6-75P-201ENST00000515944 104 ntBASIC-0.19□□□□□ -2.44
ACTN1P12814 RNU6-758P-201ENST00000516292 89 ntBASIC-0.19□□□□□ -2.44
ACTN1P12814 AC012531.4-201ENST00000616509 177 ntBASIC-0.19□□□□□ -2.44
ACTN1P12814 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.2□□□□□ -2.44
ACTN1P12814 SNORA32.1-201ENST00000364514 115 ntBASIC-0.2□□□□□ -2.44
ACTN1P12814 RNU6-81P-201ENST00000365608 104 ntBASIC-0.2□□□□□ -2.44
ACTN1P12814 RNU6-154P-201ENST00000384306 106 ntBASIC-0.2□□□□□ -2.44
ACTN1P12814 RNU6-180P-201ENST00000516697 61 ntBASIC-0.2□□□□□ -2.44
ACTN1P12814 MIR4439-201ENST00000583746 80 ntBASIC-0.2□□□□□ -2.44
ACTN1P12814 AP001180.6-201ENST00000584918 159 ntBASIC-0.2□□□□□ -2.44
ACTN1P12814 RN7SL660P-201ENST00000614852 299 ntBASIC-0.2□□□□□ -2.44
ACTN1P12814 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.21□□□□□ -2.44
ACTN1P12814 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.21□□□□□ -2.44
ACTN1P12814 MIR451A-201ENST00000385059 72 ntBASIC-0.21□□□□□ -2.44
ACTN1P12814 MIR214-201ENST00000385214 110 ntBASIC-0.21□□□□□ -2.44
ACTN1P12814 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.21□□□□□ -2.44
ACTN1P12814 snoU13.19-201ENST00000459148 104 ntBASIC-0.21□□□□□ -2.44
ACTN1P12814 MIR4777-201ENST00000583710 86 ntBASIC-0.21□□□□□ -2.44
ACTN1P12814 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.21□□□□□ -2.44
ACTN1P12814 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.22□□□□□ -2.44
ACTN1P12814 RNU6-476P-201ENST00000384726 107 ntBASIC-0.22□□□□□ -2.44
ACTN1P12814 RNU7-85P-201ENST00000458851 63 ntBASIC-0.22□□□□□ -2.44
ACTN1P12814 MIR4493-201ENST00000584016 73 ntBASIC-0.22□□□□□ -2.44
ACTN1P12814 MIR1295B-201ENST00000636144 60 ntBASIC-0.22□□□□□ -2.44
ACTN1P12814 RNY4P3-201ENST00000365254 95 ntBASIC-0.23□□□□□ -2.45
ACTN1P12814 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.23□□□□□ -2.45
ACTN1P12814 CR383656.4-201ENST00000546909 122 ntBASIC-0.23□□□□□ -2.45
ACTN1P12814 MIR6129-201ENST00000616087 109 ntBASIC-0.23□□□□□ -2.45
ACTN1P12814 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.24□□□□□ -2.45
ACTN1P12814 AC104692.1-201ENST00000472406 90 ntBASIC-0.24□□□□□ -2.45
ACTN1P12814 RNU6-719P-201ENST00000516671 104 ntBASIC-0.24□□□□□ -2.45
ACTN1P12814 RNU6-644P-201ENST00000391155 98 ntBASIC-0.25□□□□□ -2.45
ACTN1P12814 FGF7P7-201ENST00000514120 227 ntBASIC-0.25□□□□□ -2.45
ACTN1P12814 SCARNA23-201ENST00000516060 130 ntBASIC-0.25□□□□□ -2.45
ACTN1P12814 RNU6-762P-201ENST00000517107 102 ntBASIC-0.25□□□□□ -2.45
ACTN1P12814 RNA5SP368-201ENST00000364298 116 ntBASIC-0.26□□□□□ -2.45
ACTN1P12814 SNORD114-29-201ENST00000364819 70 ntBASIC-0.26□□□□□ -2.45
ACTN1P12814 SNORD114-12-201ENST00000365400 75 ntBASIC-0.26□□□□□ -2.45
ACTN1P12814 RNU6-904P-201ENST00000516206 101 ntBASIC-0.26□□□□□ -2.45
ACTN1P12814 MIR4645-201ENST00000583158 77 ntBASIC-0.26□□□□□ -2.45
ACTN1P12814 MIR548O2-201ENST00000616090 70 ntBASIC-0.26□□□□□ -2.45
ACTN1P12814 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.26□□□□□ -2.45
ACTN1P12814 RNU6-132P-201ENST00000383863 107 ntBASIC-0.27□□□□□ -2.45
ACTN1P12814 RNU6-22P-201ENST00000384355 107 ntBASIC-0.27□□□□□ -2.45
ACTN1P12814 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.27□□□□□ -2.45
ACTN1P12814 MIR652-201ENST00000385278 98 ntBASIC-0.27□□□□□ -2.45
ACTN1P12814 MIR216B-201ENST00000390186 82 ntBASIC-0.27□□□□□ -2.45
ACTN1P12814 MIR1302-5-201ENST00000408164 150 ntBASIC-0.27□□□□□ -2.45
ACTN1P12814 RNU6-62P-201ENST00000516526 102 ntBASIC-0.27□□□□□ -2.45
ACTN1P12814 RNU6-54P-201ENST00000365563 107 ntBASIC-0.28□□□□□ -2.45
ACTN1P12814 SNORA19-201ENST00000384737 128 ntBASIC-0.28□□□□□ -2.45
ACTN1P12814 MIR604-201ENST00000384880 94 ntBASIC-0.28□□□□□ -2.45
ACTN1P12814 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.28□□□□□ -2.45
ACTN1P12814 RNU6-519P-201ENST00000410590 108 ntBASIC-0.28□□□□□ -2.45
ACTN1P12814 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.28□□□□□ -2.45
ACTN1P12814 MIR148A-201ENST00000362215 68 ntBASIC-0.29□□□□□ -2.46
ACTN1P12814 RNA5SP205-201ENST00000364653 136 ntBASIC-0.29□□□□□ -2.46
ACTN1P12814 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.29□□□□□ -2.46
ACTN1P12814 MIR590-201ENST00000385008 97 ntBASIC-0.29□□□□□ -2.46
ACTN1P12814 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.29□□□□□ -2.46
ACTN1P12814 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.29□□□□□ -2.46
ACTN1P12814 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.29□□□□□ -2.46
ACTN1P12814 MIR3910-1-201ENST00000580936 111 ntBASIC-0.29□□□□□ -2.46
ACTN1P12814 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.3□□□□□ -2.46
ACTN1P12814 RNU6-554P-201ENST00000410466 106 ntBASIC-0.3□□□□□ -2.46
ACTN1P12814 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.3□□□□□ -2.46
ACTN1P12814 RNU6-175P-201ENST00000516896 107 ntBASIC-0.3□□□□□ -2.46
ACTN1P12814 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.3□□□□□ -2.46
ACTN1P12814 AL627230.5-201ENST00000619807 58 ntBASIC-0.3□□□□□ -2.46
ACTN1P12814 AC132825.6-201ENST00000638861 357 ntBASIC-0.3□□□□□ -2.46
ACTN1P12814 SNORD114-15-201ENST00000364687 72 ntBASIC-0.31□□□□□ -2.46
ACTN1P12814 MIR548U-201ENST00000390728 81 ntBASIC-0.31□□□□□ -2.46
ACTN1P12814 SNORD4B-201ENST00000459083 72 ntBASIC-0.31□□□□□ -2.46
ACTN1P12814 SNORA18.1-201ENST00000363418 128 ntBASIC-0.32□□□□□ -2.46
ACTN1P12814 SNORD49B-201ENST00000365172 72 ntBASIC-0.32□□□□□ -2.46
ACTN1P12814 RNU6-46P-201ENST00000383860 107 ntBASIC-0.32□□□□□ -2.46
ACTN1P12814 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.32□□□□□ -2.46
ACTN1P12814 RNU6-313P-201ENST00000516317 112 ntBASIC-0.32□□□□□ -2.46
ACTN1P12814 RNU6-109P-201ENST00000516364 107 ntBASIC-0.32□□□□□ -2.46
ACTN1P12814 RNU6-184P-201ENST00000516514 107 ntBASIC-0.32□□□□□ -2.46
ACTN1P12814 MIR3064-201ENST00000581130 66 ntBASIC-0.32□□□□□ -2.46
ACTN1P12814 MIR101-1-201ENST00000362265 75 ntBASIC-0.33□□□□□ -2.46
ACTN1P12814 RNU6-30P-201ENST00000384561 107 ntBASIC-0.33□□□□□ -2.46
ACTN1P12814 AC104996.3-201ENST00000590718 94 ntBASIC-0.33□□□□□ -2.46
ACTN1P12814 AC108676.2-201ENST00000605225 163 ntBASIC-0.33□□□□□ -2.46
ACTN1P12814 MIR6507-201ENST00000613630 70 ntBASIC-0.33□□□□□ -2.46
ACTN1P12814 MIR20A-201ENST00000362279 71 ntBASIC-0.34□□□□□ -2.46
ACTN1P12814 RNU6-811P-201ENST00000384069 107 ntBASIC-0.34□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 219.9 ms