Protein–RNA interactions for Protein: A6NJ46

NKX6-3, Homeobox protein Nkx-6.3, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3A6NJ46 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.22□□□□□ -2.44
NKX6-3A6NJ46 AC012531.4-201ENST00000616509 177 ntBASIC-0.22□□□□□ -2.44
NKX6-3A6NJ46 MIR1295B-201ENST00000636144 60 ntBASIC-0.22□□□□□ -2.44
NKX6-3A6NJ46 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.23□□□□□ -2.45
NKX6-3A6NJ46 AC008267.6-201ENST00000441664 139 ntBASIC-0.23□□□□□ -2.45
NKX6-3A6NJ46 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.23□□□□□ -2.45
NKX6-3A6NJ46 RNU6-719P-201ENST00000516671 104 ntBASIC-0.23□□□□□ -2.45
NKX6-3A6NJ46 RNU6-762P-201ENST00000517107 102 ntBASIC-0.23□□□□□ -2.45
NKX6-3A6NJ46 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.23□□□□□ -2.45
NKX6-3A6NJ46 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.24□□□□□ -2.45
NKX6-3A6NJ46 RNU7-85P-201ENST00000458851 63 ntBASIC-0.24□□□□□ -2.45
NKX6-3A6NJ46 FGF7P7-201ENST00000514120 227 ntBASIC-0.24□□□□□ -2.45
NKX6-3A6NJ46 MIR4777-201ENST00000583710 86 ntBASIC-0.24□□□□□ -2.45
NKX6-3A6NJ46 MIR4439-201ENST00000583746 80 ntBASIC-0.24□□□□□ -2.45
NKX6-3A6NJ46 SNORD114-29-201ENST00000364819 70 ntBASIC-0.25□□□□□ -2.45
NKX6-3A6NJ46 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.25□□□□□ -2.45
NKX6-3A6NJ46 AC104692.1-201ENST00000472406 90 ntBASIC-0.25□□□□□ -2.45
NKX6-3A6NJ46 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.26□□□□□ -2.45
NKX6-3A6NJ46 MIR652-201ENST00000385278 98 ntBASIC-0.26□□□□□ -2.45
NKX6-3A6NJ46 RNU6-54P-201ENST00000365563 107 ntBASIC-0.27□□□□□ -2.45
NKX6-3A6NJ46 RNU6-132P-201ENST00000383863 107 ntBASIC-0.27□□□□□ -2.45
NKX6-3A6NJ46 RNU6-476P-201ENST00000384726 107 ntBASIC-0.27□□□□□ -2.45
NKX6-3A6NJ46 MIR214-201ENST00000385214 110 ntBASIC-0.27□□□□□ -2.45
NKX6-3A6NJ46 MIR6129-201ENST00000616087 109 ntBASIC-0.27□□□□□ -2.45
NKX6-3A6NJ46 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.27□□□□□ -2.45
NKX6-3A6NJ46 MIR148A-201ENST00000362215 68 ntBASIC-0.28□□□□□ -2.45
NKX6-3A6NJ46 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.28□□□□□ -2.45
NKX6-3A6NJ46 RNU6-644P-201ENST00000391155 98 ntBASIC-0.28□□□□□ -2.45
NKX6-3A6NJ46 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.28□□□□□ -2.45
NKX6-3A6NJ46 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.28□□□□□ -2.45
NKX6-3A6NJ46 SCARNA23-201ENST00000516060 130 ntBASIC-0.28□□□□□ -2.45
NKX6-3A6NJ46 RNU6-175P-201ENST00000516896 107 ntBASIC-0.28□□□□□ -2.45
NKX6-3A6NJ46 MIR548O2-201ENST00000616090 70 ntBASIC-0.28□□□□□ -2.45
NKX6-3A6NJ46 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.28□□□□□ -2.45
NKX6-3A6NJ46 RNU6-81P-201ENST00000365608 104 ntBASIC-0.29□□□□□ -2.46
NKX6-3A6NJ46 RNU6-46P-201ENST00000383860 107 ntBASIC-0.29□□□□□ -2.46
NKX6-3A6NJ46 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.29□□□□□ -2.46
NKX6-3A6NJ46 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.29□□□□□ -2.46
NKX6-3A6NJ46 MIR216B-201ENST00000390186 82 ntBASIC-0.29□□□□□ -2.46
NKX6-3A6NJ46 RNU6-519P-201ENST00000410590 108 ntBASIC-0.29□□□□□ -2.46
NKX6-3A6NJ46 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.29□□□□□ -2.46
NKX6-3A6NJ46 SNORD49B-201ENST00000365172 72 ntBASIC-0.3□□□□□ -2.46
NKX6-3A6NJ46 SNORD4A-201ENST00000459174 72 ntBASIC-0.3□□□□□ -2.46
NKX6-3A6NJ46 RNU6-904P-201ENST00000516206 101 ntBASIC-0.3□□□□□ -2.46
NKX6-3A6NJ46 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.3□□□□□ -2.46
NKX6-3A6NJ46 IGLVI-20-201ENST00000519296 130 ntBASIC-0.3□□□□□ -2.46
NKX6-3A6NJ46 MIR6507-201ENST00000613630 70 ntBASIC-0.3□□□□□ -2.46
NKX6-3A6NJ46 SNORA19-201ENST00000384737 128 ntBASIC-0.31□□□□□ -2.46
NKX6-3A6NJ46 MIR1302-5-201ENST00000408164 150 ntBASIC-0.31□□□□□ -2.46
NKX6-3A6NJ46 AC244250.2-201ENST00000418731 148 ntBASIC-0.31□□□□□ -2.46
NKX6-3A6NJ46 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.31□□□□□ -2.46
NKX6-3A6NJ46 MIR20A-201ENST00000362279 71 ntBASIC-0.32□□□□□ -2.46
NKX6-3A6NJ46 RNA5SP98-201ENST00000363158 137 ntBASIC-0.32□□□□□ -2.46
NKX6-3A6NJ46 SNORD114-31-201ENST00000363219 75 ntBASIC-0.32□□□□□ -2.46
NKX6-3A6NJ46 SNORA18.1-201ENST00000363418 128 ntBASIC-0.32□□□□□ -2.46
NKX6-3A6NJ46 MIR590-201ENST00000385008 97 ntBASIC-0.32□□□□□ -2.46
NKX6-3A6NJ46 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.32□□□□□ -2.46
NKX6-3A6NJ46 SNORD4B-201ENST00000459083 72 ntBASIC-0.32□□□□□ -2.46
NKX6-3A6NJ46 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.32□□□□□ -2.46
NKX6-3A6NJ46 MIR3064-201ENST00000581130 66 ntBASIC-0.32□□□□□ -2.46
NKX6-3A6NJ46 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.33□□□□□ -2.46
NKX6-3A6NJ46 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.33□□□□□ -2.46
NKX6-3A6NJ46 RNU6-22P-201ENST00000384355 107 ntBASIC-0.33□□□□□ -2.46
NKX6-3A6NJ46 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.33□□□□□ -2.46
NKX6-3A6NJ46 MIR548U-201ENST00000390728 81 ntBASIC-0.33□□□□□ -2.46
NKX6-3A6NJ46 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.33□□□□□ -2.46
NKX6-3A6NJ46 RNU6-109P-201ENST00000516364 107 ntBASIC-0.33□□□□□ -2.46
NKX6-3A6NJ46 RNU6-184P-201ENST00000516514 107 ntBASIC-0.33□□□□□ -2.46
NKX6-3A6NJ46 RNU6-62P-201ENST00000516526 102 ntBASIC-0.33□□□□□ -2.46
NKX6-3A6NJ46 MIR3140-201ENST00000583685 90 ntBASIC-0.33□□□□□ -2.46
NKX6-3A6NJ46 RNU6-554P-201ENST00000410466 106 ntBASIC-0.34□□□□□ -2.46
NKX6-3A6NJ46 RNU6-320P-201ENST00000516511 106 ntBASIC-0.34□□□□□ -2.46
NKX6-3A6NJ46 AP000676.1-201ENST00000533307 52 ntBASIC-0.34□□□□□ -2.46
NKX6-3A6NJ46 AC104996.3-201ENST00000590718 94 ntBASIC-0.34□□□□□ -2.46
NKX6-3A6NJ46 RNU4-32P-201ENST00000363404 141 ntBASIC-0.35□□□□□ -2.47
NKX6-3A6NJ46 RNA5SP205-201ENST00000364653 136 ntBASIC-0.35□□□□□ -2.47
NKX6-3A6NJ46 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.35□□□□□ -2.47
NKX6-3A6NJ46 RNU6-811P-201ENST00000384069 107 ntBASIC-0.35□□□□□ -2.47
NKX6-3A6NJ46 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.35□□□□□ -2.47
NKX6-3A6NJ46 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.35□□□□□ -2.47
NKX6-3A6NJ46 U3.27-201ENST00000391237 200 ntBASIC-0.35□□□□□ -2.47
NKX6-3A6NJ46 RNU7-61P-201ENST00000515897 61 ntBASIC-0.35□□□□□ -2.47
NKX6-3A6NJ46 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.35□□□□□ -2.47
NKX6-3A6NJ46 RNA5SP292-201ENST00000390974 118 ntBASIC-0.36□□□□□ -2.47
NKX6-3A6NJ46 RNU6-972P-201ENST00000391208 107 ntBASIC-0.36□□□□□ -2.47
NKX6-3A6NJ46 RNU6-887P-201ENST00000410660 100 ntBASIC-0.36□□□□□ -2.47
NKX6-3A6NJ46 AC244090.1-201ENST00000441884 93 ntBASIC-0.36□□□□□ -2.47
NKX6-3A6NJ46 RNU6-162P-201ENST00000516228 103 ntBASIC-0.36□□□□□ -2.47
NKX6-3A6NJ46 MIR3910-1-201ENST00000580936 111 ntBASIC-0.36□□□□□ -2.47
NKX6-3A6NJ46 MIR4645-201ENST00000583158 77 ntBASIC-0.36□□□□□ -2.47
NKX6-3A6NJ46 SNORD58A-201ENST00000383875 65 ntBASIC-0.37□□□□□ -2.47
NKX6-3A6NJ46 RNU6-106P-201ENST00000384405 107 ntBASIC-0.37□□□□□ -2.47
NKX6-3A6NJ46 RNU6-455P-201ENST00000384681 107 ntBASIC-0.37□□□□□ -2.47
NKX6-3A6NJ46 SNORD42B-201ENST00000458893 67 ntBASIC-0.37□□□□□ -2.47
NKX6-3A6NJ46 MIR5589-201ENST00000579442 60 ntBASIC-0.37□□□□□ -2.47
NKX6-3A6NJ46 AC132825.6-201ENST00000638861 357 ntBASIC-0.37□□□□□ -2.47
NKX6-3A6NJ46 SNORD14C-201ENST00000365382 88 ntBASIC-0.38□□□□□ -2.47
NKX6-3A6NJ46 MIR582-201ENST00000365731 98 ntBASIC-0.38□□□□□ -2.47
NKX6-3A6NJ46 RNU6-313P-201ENST00000516317 112 ntBASIC-0.38□□□□□ -2.47
NKX6-3A6NJ46 RNA5SP395-201ENST00000516567 118 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 175.8 ms