Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.19□□□□□ -2.44
TRBV4-1A0A0J9YWV2 RNU6-106P-201ENST00000384405 107 ntBASIC-0.2□□□□□ -2.44
TRBV4-1A0A0J9YWV2 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.2□□□□□ -2.44
TRBV4-1A0A0J9YWV2 RNU6-972P-201ENST00000391208 107 ntBASIC-0.2□□□□□ -2.44
TRBV4-1A0A0J9YWV2 SNORD4B-201ENST00000459083 72 ntBASIC-0.2□□□□□ -2.44
TRBV4-1A0A0J9YWV2 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.21□□□□□ -2.44
TRBV4-1A0A0J9YWV2 Y_RNA.226-201ENST00000364337 114 ntBASIC-0.21□□□□□ -2.44
TRBV4-1A0A0J9YWV2 SNORA32.1-201ENST00000364514 115 ntBASIC-0.21□□□□□ -2.44
TRBV4-1A0A0J9YWV2 RNU6-132P-201ENST00000383863 107 ntBASIC-0.21□□□□□ -2.44
TRBV4-1A0A0J9YWV2 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.21□□□□□ -2.44
TRBV4-1A0A0J9YWV2 MIR1287-201ENST00000408492 90 ntBASIC-0.21□□□□□ -2.44
TRBV4-1A0A0J9YWV2 RNU6-554P-201ENST00000410466 106 ntBASIC-0.21□□□□□ -2.44
TRBV4-1A0A0J9YWV2 RNU6-313P-201ENST00000516317 112 ntBASIC-0.21□□□□□ -2.44
TRBV4-1A0A0J9YWV2 RNU6-175P-201ENST00000516896 107 ntBASIC-0.21□□□□□ -2.44
TRBV4-1A0A0J9YWV2 SNORD58A-201ENST00000383875 65 ntBASIC-0.22□□□□□ -2.44
TRBV4-1A0A0J9YWV2 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.22□□□□□ -2.44
TRBV4-1A0A0J9YWV2 MIR590-201ENST00000385008 97 ntBASIC-0.22□□□□□ -2.44
TRBV4-1A0A0J9YWV2 MIR548U-201ENST00000390728 81 ntBASIC-0.22□□□□□ -2.44
TRBV4-1A0A0J9YWV2 RNU6-887P-201ENST00000410660 100 ntBASIC-0.22□□□□□ -2.44
TRBV4-1A0A0J9YWV2 MIR3064-201ENST00000581130 66 ntBASIC-0.22□□□□□ -2.44
TRBV4-1A0A0J9YWV2 SNORA18.1-201ENST00000363418 128 ntBASIC-0.23□□□□□ -2.45
TRBV4-1A0A0J9YWV2 MIR598-201ENST00000384868 97 ntBASIC-0.23□□□□□ -2.45
TRBV4-1A0A0J9YWV2 MIR652-201ENST00000385278 98 ntBASIC-0.23□□□□□ -2.45
TRBV4-1A0A0J9YWV2 Y_RNA.676-201ENST00000516393 96 ntBASIC-0.23□□□□□ -2.45
TRBV4-1A0A0J9YWV2 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.23□□□□□ -2.45
TRBV4-1A0A0J9YWV2 MIR20A-201ENST00000362279 71 ntBASIC-0.24□□□□□ -2.45
TRBV4-1A0A0J9YWV2 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.24□□□□□ -2.45
TRBV4-1A0A0J9YWV2 SNORA19-201ENST00000384737 128 ntBASIC-0.24□□□□□ -2.45
TRBV4-1A0A0J9YWV2 RNA5SP63-201ENST00000391225 112 ntBASIC-0.24□□□□□ -2.45
TRBV4-1A0A0J9YWV2 RNU6-519P-201ENST00000410590 108 ntBASIC-0.24□□□□□ -2.45
TRBV4-1A0A0J9YWV2 RNU2-51P-201ENST00000410708 197 ntBASIC-0.24□□□□□ -2.45
TRBV4-1A0A0J9YWV2 MIR5190-201ENST00000581537 80 ntBASIC-0.24□□□□□ -2.45
TRBV4-1A0A0J9YWV2 AC104996.3-201ENST00000590718 94 ntBASIC-0.24□□□□□ -2.45
TRBV4-1A0A0J9YWV2 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.24□□□□□ -2.45
TRBV4-1A0A0J9YWV2 RNY1P4-201ENST00000384595 115 ntBASIC-0.25□□□□□ -2.45
TRBV4-1A0A0J9YWV2 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.25□□□□□ -2.45
TRBV4-1A0A0J9YWV2 AC244090.1-201ENST00000441884 93 ntBASIC-0.25□□□□□ -2.45
TRBV4-1A0A0J9YWV2 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.25□□□□□ -2.45
TRBV4-1A0A0J9YWV2 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.25□□□□□ -2.45
TRBV4-1A0A0J9YWV2 MIR6507-201ENST00000613630 70 ntBASIC-0.25□□□□□ -2.45
TRBV4-1A0A0J9YWV2 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.26□□□□□ -2.45
TRBV4-1A0A0J9YWV2 RNU6-54P-201ENST00000365563 107 ntBASIC-0.26□□□□□ -2.45
TRBV4-1A0A0J9YWV2 RNU6-811P-201ENST00000384069 107 ntBASIC-0.26□□□□□ -2.45
TRBV4-1A0A0J9YWV2 SNORD4A-201ENST00000459174 72 ntBASIC-0.26□□□□□ -2.45
TRBV4-1A0A0J9YWV2 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.26□□□□□ -2.45
TRBV4-1A0A0J9YWV2 SNORA63.2-201ENST00000362603 126 ntBASIC-0.27□□□□□ -2.45
TRBV4-1A0A0J9YWV2 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.27□□□□□ -2.45
TRBV4-1A0A0J9YWV2 RNA5SP98-201ENST00000363158 137 ntBASIC-0.27□□□□□ -2.45
TRBV4-1A0A0J9YWV2 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.27□□□□□ -2.45
TRBV4-1A0A0J9YWV2 SNORD116-10-201ENST00000363791 102 ntBASIC-0.27□□□□□ -2.45
TRBV4-1A0A0J9YWV2 RNU6-766P-201ENST00000362478 107 ntBASIC-0.28□□□□□ -2.45
TRBV4-1A0A0J9YWV2 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.28□□□□□ -2.45
TRBV4-1A0A0J9YWV2 AC244250.2-201ENST00000418731 148 ntBASIC-0.28□□□□□ -2.45
TRBV4-1A0A0J9YWV2 FGF7P7-201ENST00000514120 227 ntBASIC-0.28□□□□□ -2.45
TRBV4-1A0A0J9YWV2 MIR655-201ENST00000362159 97 ntBASIC-0.29□□□□□ -2.46
TRBV4-1A0A0J9YWV2 SNORD49B-201ENST00000365172 72 ntBASIC-0.29□□□□□ -2.46
TRBV4-1A0A0J9YWV2 SNORD114-12-201ENST00000365400 75 ntBASIC-0.29□□□□□ -2.46
TRBV4-1A0A0J9YWV2 MIR193B-201ENST00000384907 83 ntBASIC-0.29□□□□□ -2.46
TRBV4-1A0A0J9YWV2 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.29□□□□□ -2.46
TRBV4-1A0A0J9YWV2 RNU7-61P-201ENST00000515897 61 ntBASIC-0.29□□□□□ -2.46
TRBV4-1A0A0J9YWV2 RNU6-109P-201ENST00000516364 107 ntBASIC-0.29□□□□□ -2.46
TRBV4-1A0A0J9YWV2 RNU6-184P-201ENST00000516514 107 ntBASIC-0.29□□□□□ -2.46
TRBV4-1A0A0J9YWV2 RNU6-719P-201ENST00000516671 104 ntBASIC-0.29□□□□□ -2.46
TRBV4-1A0A0J9YWV2 SNORD114-4-201ENST00000363962 75 ntBASIC-0.3□□□□□ -2.46
TRBV4-1A0A0J9YWV2 SNORA24B-201ENST00000384176 131 ntBASIC-0.3□□□□□ -2.46
TRBV4-1A0A0J9YWV2 RNA5SP292-201ENST00000390974 118 ntBASIC-0.3□□□□□ -2.46
TRBV4-1A0A0J9YWV2 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.3□□□□□ -2.46
TRBV4-1A0A0J9YWV2 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.31□□□□□ -2.46
TRBV4-1A0A0J9YWV2 SNORD42B-201ENST00000458893 67 ntBASIC-0.31□□□□□ -2.46
TRBV4-1A0A0J9YWV2 RNU6-158P-201ENST00000517104 100 ntBASIC-0.31□□□□□ -2.46
TRBV4-1A0A0J9YWV2 RNU6-789P-201ENST00000517105 102 ntBASIC-0.31□□□□□ -2.46
TRBV4-1A0A0J9YWV2 MIR3140-201ENST00000583685 90 ntBASIC-0.31□□□□□ -2.46
TRBV4-1A0A0J9YWV2 MIR3666-201ENST00000607845 111 ntBASIC-0.31□□□□□ -2.46
TRBV4-1A0A0J9YWV2 MIR330-201ENST00000362196 94 ntBASIC-0.32□□□□□ -2.46
TRBV4-1A0A0J9YWV2 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.32□□□□□ -2.46
TRBV4-1A0A0J9YWV2 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.32□□□□□ -2.46
TRBV4-1A0A0J9YWV2 AL606753.1-201ENST00000427435 87 ntBASIC-0.32□□□□□ -2.46
TRBV4-1A0A0J9YWV2 SNORA18.5-201ENST00000516616 101 ntBASIC-0.32□□□□□ -2.46
TRBV4-1A0A0J9YWV2 AC026421.1-201ENST00000519101 163 ntBASIC-0.32□□□□□ -2.46
TRBV4-1A0A0J9YWV2 RN7SL793P-201ENST00000583259 296 ntBASIC-0.32□□□□□ -2.46
TRBV4-1A0A0J9YWV2 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.33□□□□□ -2.46
TRBV4-1A0A0J9YWV2 RNY4P18-201ENST00000391107 89 ntBASIC-0.33□□□□□ -2.46
TRBV4-1A0A0J9YWV2 RNU6-406P-201ENST00000516470 107 ntBASIC-0.33□□□□□ -2.46
TRBV4-1A0A0J9YWV2 RNU6-762P-201ENST00000517107 102 ntBASIC-0.33□□□□□ -2.46
TRBV4-1A0A0J9YWV2 RNU6-495P-201ENST00000362995 107 ntBASIC-0.34□□□□□ -2.46
TRBV4-1A0A0J9YWV2 SNORA49-201ENST00000386157 136 ntBASIC-0.34□□□□□ -2.46
TRBV4-1A0A0J9YWV2 MIR1273G-201ENST00000577677 100 ntBASIC-0.34□□□□□ -2.46
TRBV4-1A0A0J9YWV2 U7.3-201ENST00000616123 62 ntBASIC-0.34□□□□□ -2.46
TRBV4-1A0A0J9YWV2 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.35□□□□□ -2.47
TRBV4-1A0A0J9YWV2 RNY4P3-201ENST00000365254 95 ntBASIC-0.35□□□□□ -2.47
TRBV4-1A0A0J9YWV2 MIR582-201ENST00000365731 98 ntBASIC-0.35□□□□□ -2.47
TRBV4-1A0A0J9YWV2 MIR548E-201ENST00000408287 88 ntBASIC-0.35□□□□□ -2.47
TRBV4-1A0A0J9YWV2 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.35□□□□□ -2.47
TRBV4-1A0A0J9YWV2 AL031737.1-201ENST00000450125 223 ntBASIC-0.35□□□□□ -2.47
TRBV4-1A0A0J9YWV2 SNORD2-201ENST00000459163 69 ntBASIC-0.35□□□□□ -2.47
TRBV4-1A0A0J9YWV2 MIR8087-201ENST00000612745 78 ntBASIC-0.35□□□□□ -2.47
TRBV4-1A0A0J9YWV2 RNU4-32P-201ENST00000363404 141 ntBASIC-0.36□□□□□ -2.47
TRBV4-1A0A0J9YWV2 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.36□□□□□ -2.47
TRBV4-1A0A0J9YWV2 SNORD90-201ENST00000391145 111 ntBASIC-0.36□□□□□ -2.47
TRBV4-1A0A0J9YWV2 RNA5SP300-201ENST00000391197 107 ntBASIC-0.36□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 178.4 ms