Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 RNA5SP436-201ENST00000516020 115 ntBASIC0.97□□□□□ -2.25
NOTCH3Q9UM47 AC138907.6-201ENST00000568401 126 ntBASIC0.97□□□□□ -2.25
NOTCH3Q9UM47 AC138869.1-201ENST00000568623 124 ntBASIC0.97□□□□□ -2.25
NOTCH3Q9UM47 AC013244.2-201ENST00000603396 103 ntBASIC0.97□□□□□ -2.25
NOTCH3Q9UM47 U1.36-201ENST00000620684 176 ntBASIC0.97□□□□□ -2.25
NOTCH3Q9UM47 AL359851.1-201ENST00000569460 4997 ntBASIC0.97□□□□□ -2.25
NOTCH3Q9UM47 SNORD45.1-201ENST00000363181 77 ntBASIC0.97□□□□□ -2.25
NOTCH3Q9UM47 SNORA25.5-201ENST00000363782 126 ntBASIC0.97□□□□□ -2.25
NOTCH3Q9UM47 RNU1-36P-201ENST00000365130 165 ntBASIC0.97□□□□□ -2.25
NOTCH3Q9UM47 Y_RNA.536-201ENST00000384621 113 ntBASIC0.97□□□□□ -2.25
NOTCH3Q9UM47 RNU6-654P-201ENST00000364373 107 ntBASIC0.96□□□□□ -2.26
NOTCH3Q9UM47 SNORA6-201ENST00000384033 151 ntBASIC0.96□□□□□ -2.26
NOTCH3Q9UM47 MIR617-201ENST00000385030 97 ntBASIC0.96□□□□□ -2.26
NOTCH3Q9UM47 MIR519A1-201ENST00000385257 85 ntBASIC0.96□□□□□ -2.26
NOTCH3Q9UM47 JTBP1-201ENST00000441314 247 ntBASIC0.96□□□□□ -2.26
NOTCH3Q9UM47 RNU6-982P-201ENST00000516216 102 ntBASIC0.96□□□□□ -2.26
NOTCH3Q9UM47 AP003716.2-201ENST00000528260 108 ntBASIC0.96□□□□□ -2.26
NOTCH3Q9UM47 SNORA9.1-201ENST00000362412 131 ntBASIC0.95□□□□□ -2.26
NOTCH3Q9UM47 Y_RNA.443-201ENST00000384135 111 ntBASIC0.95□□□□□ -2.26
NOTCH3Q9UM47 RNU6-1054P-201ENST00000411293 104 ntBASIC0.95□□□□□ -2.26
NOTCH3Q9UM47 RNU7-24P-201ENST00000458867 62 ntBASIC0.95□□□□□ -2.26
NOTCH3Q9UM47 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
NOTCH3Q9UM47 SUMO2P12-201ENST00000405924 140 ntBASIC0.95□□□□□ -2.26
NOTCH3Q9UM47 MIR1257-201ENST00000408490 117 ntBASIC0.95□□□□□ -2.26
NOTCH3Q9UM47 AL161935.2-201ENST00000414627 60 ntBASIC0.95□□□□□ -2.26
NOTCH3Q9UM47 MIR2115-201ENST00000516657 100 ntBASIC0.95□□□□□ -2.26
NOTCH3Q9UM47 MIR7974-201ENST00000615835 79 ntBASIC0.95□□□□□ -2.26
NOTCH3Q9UM47 RNU6-895P-201ENST00000384125 103 ntBASIC0.94□□□□□ -2.26
NOTCH3Q9UM47 SNORA24B-201ENST00000384176 131 ntBASIC0.94□□□□□ -2.26
NOTCH3Q9UM47 MIR588-201ENST00000384900 83 ntBASIC0.94□□□□□ -2.26
NOTCH3Q9UM47 RNU6-1177P-201ENST00000391058 104 ntBASIC0.94□□□□□ -2.26
NOTCH3Q9UM47 AC092628.1-201ENST00000436250 252 ntBASIC0.94□□□□□ -2.26
NOTCH3Q9UM47 AL691482.2-201ENST00000457453 84 ntBASIC0.94□□□□□ -2.26
NOTCH3Q9UM47 RNU6-752P-201ENST00000516376 102 ntBASIC0.94□□□□□ -2.26
NOTCH3Q9UM47 Y_RNA.56-201ENST00000362798 112 ntBASIC0.94□□□□□ -2.26
NOTCH3Q9UM47 RNU6-824P-201ENST00000363724 104 ntBASIC0.94□□□□□ -2.26
NOTCH3Q9UM47 RNA5SP192-201ENST00000364404 120 ntBASIC0.94□□□□□ -2.26
NOTCH3Q9UM47 SNORD113.3-201ENST00000364630 78 ntBASIC0.94□□□□□ -2.26
NOTCH3Q9UM47 Y_RNA.330-201ENST00000365230 109 ntBASIC0.94□□□□□ -2.26
NOTCH3Q9UM47 SNORD90-201ENST00000391145 111 ntBASIC0.94□□□□□ -2.26
NOTCH3Q9UM47 MTND4LP1-201ENST00000446263 157 ntBASIC0.94□□□□□ -2.26
NOTCH3Q9UM47 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.94□□□□□ -2.26
NOTCH3Q9UM47 AL133373.1-201ENST00000497098 94 ntBASIC0.94□□□□□ -2.26
NOTCH3Q9UM47 MIR3122-201ENST00000577243 73 ntBASIC0.94□□□□□ -2.26
NOTCH3Q9UM47 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.94□□□□□ -2.26
NOTCH3Q9UM47 MIR4295-201ENST00000585286 85 ntBASIC0.94□□□□□ -2.26
NOTCH3Q9UM47 TRDV1-202ENST00000621643 102 ntBASIC0.94□□□□□ -2.26
NOTCH3Q9UM47 MIR6739-201ENST00000622461 75 ntBASIC0.94□□□□□ -2.26
NOTCH3Q9UM47 MIR6516-201ENST00000630554 81 ntBASIC0.94□□□□□ -2.26
NOTCH3Q9UM47 RNA5SP264-201ENST00000363115 107 ntBASIC0.93□□□□□ -2.26
NOTCH3Q9UM47 RNU6-669P-201ENST00000365575 107 ntBASIC0.93□□□□□ -2.26
NOTCH3Q9UM47 MIR17-201ENST00000385012 84 ntBASIC0.93□□□□□ -2.26
NOTCH3Q9UM47 RNU6-274P-201ENST00000459566 107 ntBASIC0.93□□□□□ -2.26
NOTCH3Q9UM47 RNU6-165P-201ENST00000517170 99 ntBASIC0.93□□□□□ -2.26
NOTCH3Q9UM47 SNORA3A-201ENST00000364113 130 ntBASIC0.93□□□□□ -2.26
NOTCH3Q9UM47 SNORD41-201ENST00000386967 70 ntBASIC0.93□□□□□ -2.26
NOTCH3Q9UM47 MIR216B-201ENST00000390186 82 ntBASIC0.93□□□□□ -2.26
NOTCH3Q9UM47 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
NOTCH3Q9UM47 AC103706.3-201ENST00000636297 85 ntBASIC0.93□□□□□ -2.26
NOTCH3Q9UM47 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
NOTCH3Q9UM47 AC023934.1-201ENST00000574529 2389 ntBASIC0.92□□□□□ -2.26
NOTCH3Q9UM47 RNU6-495P-201ENST00000362995 107 ntBASIC0.92□□□□□ -2.26
NOTCH3Q9UM47 MIR203A-201ENST00000384836 110 ntBASIC0.92□□□□□ -2.26
NOTCH3Q9UM47 MIR3664-201ENST00000579074 99 ntBASIC0.92□□□□□ -2.26
NOTCH3Q9UM47 MTRNR2L2-201ENST00000604882 87 ntBASIC0.92□□□□□ -2.26
NOTCH3Q9UM47 MIR6082-201ENST00000613604 109 ntBASIC0.92□□□□□ -2.26
NOTCH3Q9UM47 MIR8074-201ENST00000615081 81 ntBASIC0.92□□□□□ -2.26
NOTCH3Q9UM47 MIR4773-1-201ENST00000637203 78 ntBASIC0.92□□□□□ -2.26
NOTCH3Q9UM47 MIR524-201ENST00000385242 87 ntBASIC0.92□□□□□ -2.26
NOTCH3Q9UM47 MIR942-201ENST00000401111 86 ntBASIC0.92□□□□□ -2.26
NOTCH3Q9UM47 RNU6-977P-201ENST00000516411 103 ntBASIC0.92□□□□□ -2.26
NOTCH3Q9UM47 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
NOTCH3Q9UM47 RNU6-1335P-201ENST00000365426 107 ntBASIC0.91□□□□□ -2.26
NOTCH3Q9UM47 Y_RNA.457-201ENST00000384237 111 ntBASIC0.91□□□□□ -2.26
NOTCH3Q9UM47 MIR633-201ENST00000384821 98 ntBASIC0.91□□□□□ -2.26
NOTCH3Q9UM47 MIR125B2-201ENST00000385128 89 ntBASIC0.91□□□□□ -2.26
NOTCH3Q9UM47 RNU7-102P-201ENST00000458948 62 ntBASIC0.91□□□□□ -2.26
NOTCH3Q9UM47 RNU6-881P-201ENST00000516813 102 ntBASIC0.91□□□□□ -2.26
NOTCH3Q9UM47 MIR4804-201ENST00000581683 73 ntBASIC0.91□□□□□ -2.26
NOTCH3Q9UM47 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.91□□□□□ -2.26
NOTCH3Q9UM47 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
NOTCH3Q9UM47 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.91□□□□□ -2.26
NOTCH3Q9UM47 Y_RNA.13-201ENST00000362403 112 ntBASIC0.9□□□□□ -2.26
NOTCH3Q9UM47 SNORA67.1-201ENST00000364749 141 ntBASIC0.9□□□□□ -2.26
NOTCH3Q9UM47 RNU1-52P-201ENST00000384190 164 ntBASIC0.9□□□□□ -2.26
NOTCH3Q9UM47 MIR513A1-201ENST00000385138 129 ntBASIC0.9□□□□□ -2.26
NOTCH3Q9UM47 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.9□□□□□ -2.26
NOTCH3Q9UM47 AC079140.2-201ENST00000506193 142 ntBASIC0.9□□□□□ -2.26
NOTCH3Q9UM47 Y_RNA.809-201ENST00000516058 95 ntBASIC0.9□□□□□ -2.26
NOTCH3Q9UM47 RNU6-765P-201ENST00000516916 99 ntBASIC0.9□□□□□ -2.26
NOTCH3Q9UM47 MIR6509-201ENST00000614603 85 ntBASIC0.9□□□□□ -2.26
NOTCH3Q9UM47 RNU6-829P-201ENST00000363700 112 ntBASIC0.9□□□□□ -2.27
NOTCH3Q9UM47 RNU6-1187P-201ENST00000364771 110 ntBASIC0.9□□□□□ -2.27
NOTCH3Q9UM47 SNORD1A-201ENST00000364968 72 ntBASIC0.9□□□□□ -2.27
NOTCH3Q9UM47 SNORD116-24-201ENST00000384549 92 ntBASIC0.9□□□□□ -2.27
NOTCH3Q9UM47 SNORD75.2-201ENST00000408784 58 ntBASIC0.9□□□□□ -2.27
NOTCH3Q9UM47 AC055731.1-201ENST00000474387 401 ntBASIC0.9□□□□□ -2.27
NOTCH3Q9UM47 SNORA31.14-201ENST00000516728 116 ntBASIC0.9□□□□□ -2.27
NOTCH3Q9UM47 AC015688.6-201ENST00000577737 104 ntBASIC0.9□□□□□ -2.27
NOTCH3Q9UM47 MIR103A2-201ENST00000362154 78 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 194.9 ms