Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 Y_RNA.95-201ENST00000363079 95 ntBASIC0.19□□□□□ -2.38
GTF3C4Q9UKN8 SNORA51.5-201ENST00000384126 131 ntBASIC0.19□□□□□ -2.38
GTF3C4Q9UKN8 MIR519E-201ENST00000385075 84 ntBASIC0.19□□□□□ -2.38
GTF3C4Q9UKN8 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.19□□□□□ -2.38
GTF3C4Q9UKN8 MIR501-201ENST00000390204 84 ntBASIC0.19□□□□□ -2.38
GTF3C4Q9UKN8 RNU6-243P-201ENST00000391140 107 ntBASIC0.19□□□□□ -2.38
GTF3C4Q9UKN8 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.19□□□□□ -2.38
GTF3C4Q9UKN8 RNU7-85P-201ENST00000458851 63 ntBASIC0.19□□□□□ -2.38
GTF3C4Q9UKN8 RNU6-75P-201ENST00000515944 104 ntBASIC0.19□□□□□ -2.38
GTF3C4Q9UKN8 RNU6-904P-201ENST00000516206 101 ntBASIC0.19□□□□□ -2.38
GTF3C4Q9UKN8 RNU6-287P-201ENST00000516230 98 ntBASIC0.19□□□□□ -2.38
GTF3C4Q9UKN8 RNU7-13P-201ENST00000516413 62 ntBASIC0.19□□□□□ -2.38
GTF3C4Q9UKN8 AC069113.3-201ENST00000521019 150 ntBASIC0.19□□□□□ -2.38
GTF3C4Q9UKN8 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.19□□□□□ -2.38
GTF3C4Q9UKN8 Y_RNA.30-201ENST00000362572 97 ntBASIC0.18□□□□□ -2.38
GTF3C4Q9UKN8 RNA5SP257-201ENST00000363023 116 ntBASIC0.18□□□□□ -2.38
GTF3C4Q9UKN8 MIR643-201ENST00000385267 97 ntBASIC0.18□□□□□ -2.38
GTF3C4Q9UKN8 RNU6-127P-201ENST00000390897 107 ntBASIC0.18□□□□□ -2.38
GTF3C4Q9UKN8 RNA5SP63-201ENST00000391225 112 ntBASIC0.18□□□□□ -2.38
GTF3C4Q9UKN8 Y_RNA.283-201ENST00000364798 112 ntBASIC0.17□□□□□ -2.38
GTF3C4Q9UKN8 Y_RNA.374-201ENST00000365606 101 ntBASIC0.17□□□□□ -2.38
GTF3C4Q9UKN8 RNY4P18-201ENST00000391107 89 ntBASIC0.17□□□□□ -2.38
GTF3C4Q9UKN8 MIR1295A-201ENST00000408463 79 ntBASIC0.17□□□□□ -2.38
GTF3C4Q9UKN8 MIR548H2-201ENST00000408874 88 ntBASIC0.17□□□□□ -2.38
GTF3C4Q9UKN8 HMGN2P22-201ENST00000427588 175 ntBASIC0.17□□□□□ -2.38
GTF3C4Q9UKN8 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.17□□□□□ -2.38
GTF3C4Q9UKN8 MIR6718-201ENST00000616153 80 ntBASIC0.17□□□□□ -2.38
GTF3C4Q9UKN8 MIR450A1-201ENST00000362262 91 ntBASIC0.16□□□□□ -2.38
GTF3C4Q9UKN8 SNORA63.4-201ENST00000362763 126 ntBASIC0.16□□□□□ -2.38
GTF3C4Q9UKN8 Y_RNA.207-201ENST00000364142 106 ntBASIC0.16□□□□□ -2.38
GTF3C4Q9UKN8 RNU6-1325P-201ENST00000364905 105 ntBASIC0.16□□□□□ -2.38
GTF3C4Q9UKN8 RNU6-1056P-201ENST00000383996 107 ntBASIC0.16□□□□□ -2.38
GTF3C4Q9UKN8 RNU6-644P-201ENST00000391155 98 ntBASIC0.16□□□□□ -2.38
GTF3C4Q9UKN8 MIR2113-201ENST00000459007 91 ntBASIC0.16□□□□□ -2.38
GTF3C4Q9UKN8 Y_RNA.709-201ENST00000516952 92 ntBASIC0.16□□□□□ -2.38
GTF3C4Q9UKN8 AC096720.1-201ENST00000604441 183 ntBASIC0.16□□□□□ -2.38
GTF3C4Q9UKN8 MIRLET7F1-201ENST00000362202 87 ntBASIC0.15□□□□□ -2.39
GTF3C4Q9UKN8 RNA5SP128-201ENST00000365305 116 ntBASIC0.15□□□□□ -2.39
GTF3C4Q9UKN8 RNU6-132P-201ENST00000383863 107 ntBASIC0.15□□□□□ -2.39
GTF3C4Q9UKN8 SNORD20-201ENST00000384550 80 ntBASIC0.15□□□□□ -2.39
GTF3C4Q9UKN8 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.15□□□□□ -2.39
GTF3C4Q9UKN8 AC093423.1-201ENST00000440817 142 ntBASIC0.15□□□□□ -2.39
GTF3C4Q9UKN8 RNU6-162P-201ENST00000516228 103 ntBASIC0.15□□□□□ -2.39
GTF3C4Q9UKN8 MIR4696-201ENST00000581431 70 ntBASIC0.15□□□□□ -2.39
GTF3C4Q9UKN8 SNORD45B-201ENST00000364617 72 ntBASIC0.14□□□□□ -2.39
GTF3C4Q9UKN8 RNU6-813P-201ENST00000384691 107 ntBASIC0.14□□□□□ -2.39
GTF3C4Q9UKN8 Y_RNA.601-201ENST00000410500 113 ntBASIC0.14□□□□□ -2.39
GTF3C4Q9UKN8 RNU7-61P-201ENST00000515897 61 ntBASIC0.14□□□□□ -2.39
GTF3C4Q9UKN8 MIR548AE1-201ENST00000583292 70 ntBASIC0.14□□□□□ -2.39
GTF3C4Q9UKN8 MIR4473-201ENST00000583731 91 ntBASIC0.14□□□□□ -2.39
GTF3C4Q9UKN8 MIR3925-201ENST00000584674 77 ntBASIC0.14□□□□□ -2.39
GTF3C4Q9UKN8 MTRNR2L2-201ENST00000604882 87 ntBASIC0.14□□□□□ -2.39
GTF3C4Q9UKN8 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.14□□□□□ -2.39
GTF3C4Q9UKN8 MIR4315-1-201ENST00000636800 73 ntBASIC0.14□□□□□ -2.39
GTF3C4Q9UKN8 MIR4315-2-201ENST00000640925 73 ntBASIC0.14□□□□□ -2.39
GTF3C4Q9UKN8 RNU1-141P-201ENST00000364623 158 ntBASIC0.13□□□□□ -2.39
GTF3C4Q9UKN8 SNORD90-201ENST00000391145 111 ntBASIC0.13□□□□□ -2.39
GTF3C4Q9UKN8 RNA5SP299-201ENST00000391203 116 ntBASIC0.13□□□□□ -2.39
GTF3C4Q9UKN8 SNORD110-201ENST00000408189 75 ntBASIC0.13□□□□□ -2.39
GTF3C4Q9UKN8 SCARNA23-201ENST00000516060 130 ntBASIC0.13□□□□□ -2.39
GTF3C4Q9UKN8 RNU6-412P-201ENST00000516434 106 ntBASIC0.13□□□□□ -2.39
GTF3C4Q9UKN8 RNU5B-6P-201ENST00000516765 68 ntBASIC0.13□□□□□ -2.39
GTF3C4Q9UKN8 AC104408.1-201ENST00000605241 170 ntBASIC0.13□□□□□ -2.39
GTF3C4Q9UKN8 SNORA9.1-201ENST00000362412 131 ntBASIC0.12□□□□□ -2.39
GTF3C4Q9UKN8 RNU6-1125P-201ENST00000363601 107 ntBASIC0.12□□□□□ -2.39
GTF3C4Q9UKN8 RNU4-36P-201ENST00000364294 144 ntBASIC0.12□□□□□ -2.39
GTF3C4Q9UKN8 RNU6-756P-201ENST00000383997 107 ntBASIC0.12□□□□□ -2.39
GTF3C4Q9UKN8 RNU6-480P-201ENST00000384332 107 ntBASIC0.12□□□□□ -2.39
GTF3C4Q9UKN8 MIR617-201ENST00000385030 97 ntBASIC0.12□□□□□ -2.39
GTF3C4Q9UKN8 Y_RNA.596-201ENST00000410462 109 ntBASIC0.12□□□□□ -2.39
GTF3C4Q9UKN8 AC006210.1-201ENST00000424882 111 ntBASIC0.12□□□□□ -2.39
GTF3C4Q9UKN8 RNU6-664P-201ENST00000362381 107 ntBASIC0.11□□□□□ -2.39
GTF3C4Q9UKN8 SNORD114-5-201ENST00000362928 70 ntBASIC0.11□□□□□ -2.39
GTF3C4Q9UKN8 SNORD101-201ENST00000384027 73 ntBASIC0.11□□□□□ -2.39
GTF3C4Q9UKN8 MIR106A-201ENST00000384870 81 ntBASIC0.11□□□□□ -2.39
GTF3C4Q9UKN8 RNU6-466P-201ENST00000391224 103 ntBASIC0.11□□□□□ -2.39
GTF3C4Q9UKN8 Y_RNA.648-201ENST00000459455 110 ntBASIC0.11□□□□□ -2.39
GTF3C4Q9UKN8 RNU6-789P-201ENST00000517105 102 ntBASIC0.11□□□□□ -2.39
GTF3C4Q9UKN8 MIR4677-201ENST00000584153 80 ntBASIC0.11□□□□□ -2.39
GTF3C4Q9UKN8 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.1□□□□□ -2.39
GTF3C4Q9UKN8 RNA5SP214-201ENST00000363378 118 ntBASIC0.1□□□□□ -2.39
GTF3C4Q9UKN8 Y_RNA.190-201ENST00000363964 101 ntBASIC0.1□□□□□ -2.39
GTF3C4Q9UKN8 SNORD114-9-201ENST00000364370 72 ntBASIC0.1□□□□□ -2.39
GTF3C4Q9UKN8 Y_RNA.273-201ENST00000364703 102 ntBASIC0.1□□□□□ -2.39
GTF3C4Q9UKN8 RNU6-215P-201ENST00000365169 102 ntBASIC0.1□□□□□ -2.39
GTF3C4Q9UKN8 MIR593-201ENST00000384856 100 ntBASIC0.1□□□□□ -2.39
GTF3C4Q9UKN8 MIR1302-5-201ENST00000408164 150 ntBASIC0.1□□□□□ -2.39
GTF3C4Q9UKN8 RNU6-1052P-201ENST00000411398 104 ntBASIC0.1□□□□□ -2.39
GTF3C4Q9UKN8 Y_RNA.681-201ENST00000516445 113 ntBASIC0.1□□□□□ -2.39
GTF3C4Q9UKN8 RNU6-719P-201ENST00000516671 104 ntBASIC0.1□□□□□ -2.39
GTF3C4Q9UKN8 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.1□□□□□ -2.39
GTF3C4Q9UKN8 MIR2909-201ENST00000617113 69 ntBASIC0.1□□□□□ -2.39
GTF3C4Q9UKN8 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.1□□□□□ -2.39
GTF3C4Q9UKN8 RNU6-834P-201ENST00000362367 110 ntBASIC0.09□□□□□ -2.4
GTF3C4Q9UKN8 RNU6-44P-201ENST00000384045 107 ntBASIC0.09□□□□□ -2.4
GTF3C4Q9UKN8 RNA5SP292-201ENST00000390974 118 ntBASIC0.09□□□□□ -2.4
GTF3C4Q9UKN8 SNORD4B-201ENST00000459083 72 ntBASIC0.09□□□□□ -2.4
GTF3C4Q9UKN8 AC026421.1-201ENST00000519101 163 ntBASIC0.09□□□□□ -2.4
GTF3C4Q9UKN8 YWHAEP2-201ENST00000580066 112 ntBASIC0.09□□□□□ -2.4
GTF3C4Q9UKN8 MIR548AD-201ENST00000584780 82 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms