Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 Y_RNA.371-201ENST00000365591 113 ntBASIC1.42□□□□□ -2.18
EPHB3P54753 Y_RNA.386-201ENST00000383913 105 ntBASIC1.42□□□□□ -2.18
EPHB3P54753 RNU6-649P-201ENST00000384463 107 ntBASIC1.42□□□□□ -2.18
EPHB3P54753 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
EPHB3P54753 SNORD79.1-201ENST00000516069 84 ntBASIC1.42□□□□□ -2.18
EPHB3P54753 MIR6078-201ENST00000611069 100 ntBASIC1.42□□□□□ -2.18
EPHB3P54753 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
EPHB3P54753 RNU6-824P-201ENST00000363724 104 ntBASIC1.41□□□□□ -2.18
EPHB3P54753 SNORD115-44-201ENST00000365391 82 ntBASIC1.41□□□□□ -2.18
EPHB3P54753 SNORD26-201ENST00000384147 75 ntBASIC1.41□□□□□ -2.18
EPHB3P54753 MIR499A-201ENST00000384903 122 ntBASIC1.41□□□□□ -2.18
EPHB3P54753 MIR154-201ENST00000385243 84 ntBASIC1.41□□□□□ -2.18
EPHB3P54753 RNU6-910P-201ENST00000390844 107 ntBASIC1.41□□□□□ -2.18
EPHB3P54753 U3.27-201ENST00000391237 200 ntBASIC1.41□□□□□ -2.18
EPHB3P54753 MIR1265-201ENST00000408444 86 ntBASIC1.41□□□□□ -2.18
EPHB3P54753 RNU7-56P-201ENST00000458744 62 ntBASIC1.41□□□□□ -2.18
EPHB3P54753 SNORD115-31-201ENST00000365318 82 ntBASIC1.4□□□□□ -2.19
EPHB3P54753 RNU6-994P-201ENST00000410507 111 ntBASIC1.4□□□□□ -2.19
EPHB3P54753 RNU1-123P-201ENST00000458950 160 ntBASIC1.4□□□□□ -2.19
EPHB3P54753 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.4□□□□□ -2.19
EPHB3P54753 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
EPHB3P54753 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.4□□□□□ -2.19
EPHB3P54753 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.39□□□□□ -2.19
EPHB3P54753 MIR2113-201ENST00000459007 91 ntBASIC1.39□□□□□ -2.19
EPHB3P54753 AC125388.1-201ENST00000459631 156 ntBASIC1.39□□□□□ -2.19
EPHB3P54753 RNU6-977P-201ENST00000516411 103 ntBASIC1.39□□□□□ -2.19
EPHB3P54753 Y_RNA.32-201ENST00000362589 110 ntBASIC1.38□□□□□ -2.19
EPHB3P54753 SNORD12-201ENST00000391002 90 ntBASIC1.38□□□□□ -2.19
EPHB3P54753 RNU1-119P-201ENST00000391122 165 ntBASIC1.38□□□□□ -2.19
EPHB3P54753 RPS29P23-201ENST00000458635 123 ntBASIC1.38□□□□□ -2.19
EPHB3P54753 RNU6-287P-201ENST00000516230 98 ntBASIC1.38□□□□□ -2.19
EPHB3P54753 MIR3675-201ENST00000583661 73 ntBASIC1.38□□□□□ -2.19
EPHB3P54753 uc_338.16-201ENST00000621804 95 ntBASIC1.38□□□□□ -2.19
EPHB3P54753 U6.111-201ENST00000636093 83 ntBASIC1.38□□□□□ -2.19
EPHB3P54753 RNA5SP403-201ENST00000363598 108 ntBASIC1.37□□□□□ -2.19
EPHB3P54753 Y_RNA.174-201ENST00000363781 105 ntBASIC1.37□□□□□ -2.19
EPHB3P54753 Y_RNA.340-201ENST00000365330 92 ntBASIC1.37□□□□□ -2.19
EPHB3P54753 RNU6-1177P-201ENST00000391058 104 ntBASIC1.37□□□□□ -2.19
EPHB3P54753 SNORA40.6-201ENST00000391153 128 ntBASIC1.37□□□□□ -2.19
EPHB3P54753 SNORD30.1-201ENST00000391309 70 ntBASIC1.37□□□□□ -2.19
EPHB3P54753 MIR1827-201ENST00000408549 66 ntBASIC1.37□□□□□ -2.19
EPHB3P54753 RNU6-1057P-201ENST00000517162 102 ntBASIC1.37□□□□□ -2.19
EPHB3P54753 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
EPHB3P54753 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
EPHB3P54753 MIR1-1-201ENST00000362147 71 ntBASIC1.36□□□□□ -2.19
EPHB3P54753 RNU6-800P-201ENST00000384473 103 ntBASIC1.36□□□□□ -2.19
EPHB3P54753 MIR100-201ENST00000385259 80 ntBASIC1.36□□□□□ -2.19
EPHB3P54753 RNU6-663P-201ENST00000391105 106 ntBASIC1.36□□□□□ -2.19
EPHB3P54753 RNU6-955P-201ENST00000410497 104 ntBASIC1.36□□□□□ -2.19
EPHB3P54753 RNU6-1052P-201ENST00000411398 104 ntBASIC1.36□□□□□ -2.19
EPHB3P54753 RNU6-719P-201ENST00000516671 104 ntBASIC1.36□□□□□ -2.19
EPHB3P54753 SNORA31.14-201ENST00000516728 116 ntBASIC1.36□□□□□ -2.19
EPHB3P54753 MIR3660-201ENST00000584845 100 ntBASIC1.36□□□□□ -2.19
EPHB3P54753 RNU6-1126P-201ENST00000384002 107 ntBASIC1.35□□□□□ -2.19
EPHB3P54753 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.35□□□□□ -2.19
EPHB3P54753 RNU6-752P-201ENST00000516376 102 ntBASIC1.35□□□□□ -2.19
EPHB3P54753 RNU7-13P-201ENST00000516413 62 ntBASIC1.35□□□□□ -2.19
EPHB3P54753 Y_RNA.258-201ENST00000364613 105 ntBASIC1.34□□□□□ -2.19
EPHB3P54753 MIR520F-201ENST00000384824 87 ntBASIC1.34□□□□□ -2.19
EPHB3P54753 MIR1276-201ENST00000408707 83 ntBASIC1.34□□□□□ -2.19
EPHB3P54753 SNORA70.22-201ENST00000517160 124 ntBASIC1.34□□□□□ -2.19
EPHB3P54753 MIR548AG2-201ENST00000581228 64 ntBASIC1.34□□□□□ -2.19
EPHB3P54753 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.34□□□□□ -2.19
EPHB3P54753 RMST_2.1-201ENST00000617263 136 ntBASIC1.34□□□□□ -2.19
EPHB3P54753 SNORD115-24-201ENST00000363528 82 ntBASIC1.33□□□□□ -2.2
EPHB3P54753 MIR758-201ENST00000390227 88 ntBASIC1.33□□□□□ -2.2
EPHB3P54753 RNU7-161P-201ENST00000517289 62 ntBASIC1.33□□□□□ -2.2
EPHB3P54753 MIR3920-201ENST00000581751 86 ntBASIC1.33□□□□□ -2.2
EPHB3P54753 MIR8053-201ENST00000613344 75 ntBASIC1.33□□□□□ -2.2
EPHB3P54753 Y_RNA.205-201ENST00000364128 113 ntBASIC1.32□□□□□ -2.2
EPHB3P54753 MIR216B-201ENST00000390186 82 ntBASIC1.32□□□□□ -2.2
EPHB3P54753 AC067940.1-201ENST00000458411 300 ntBASIC1.32□□□□□ -2.2
EPHB3P54753 RNU6-274P-201ENST00000459566 107 ntBASIC1.32□□□□□ -2.2
EPHB3P54753 RNA5SP61-201ENST00000516453 100 ntBASIC1.32□□□□□ -2.2
EPHB3P54753 RNA5SP102-201ENST00000516865 106 ntBASIC1.32□□□□□ -2.2
EPHB3P54753 MIR6504-201ENST00000613520 61 ntBASIC1.32□□□□□ -2.2
EPHB3P54753 MIR7111-201ENST00000619751 72 ntBASIC1.32□□□□□ -2.2
EPHB3P54753 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
EPHB3P54753 RNU6-382P-201ENST00000365181 106 ntBASIC1.31□□□□□ -2.2
EPHB3P54753 RNU6-471P-201ENST00000383944 106 ntBASIC1.31□□□□□ -2.2
EPHB3P54753 MIR7974-201ENST00000615835 79 ntBASIC1.31□□□□□ -2.2
EPHB3P54753 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
EPHB3P54753 SNORD115-22-201ENST00000364456 82 ntBASIC1.3□□□□□ -2.2
EPHB3P54753 SNORD45A-201ENST00000384512 84 ntBASIC1.3□□□□□ -2.2
EPHB3P54753 MIR617-201ENST00000385030 97 ntBASIC1.3□□□□□ -2.2
EPHB3P54753 MIR150-201ENST00000385048 84 ntBASIC1.3□□□□□ -2.2
EPHB3P54753 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.3□□□□□ -2.2
EPHB3P54753 RNU7-24P-201ENST00000458867 62 ntBASIC1.3□□□□□ -2.2
EPHB3P54753 AC005520.4-201ENST00000604337 90 ntBASIC1.3□□□□□ -2.2
EPHB3P54753 MIR4773-1-201ENST00000637203 78 ntBASIC1.3□□□□□ -2.2
EPHB3P54753 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
EPHB3P54753 MIR26B-201ENST00000362251 77 ntBASIC1.29□□□□□ -2.2
EPHB3P54753 RNA5SP327-201ENST00000362494 101 ntBASIC1.29□□□□□ -2.2
EPHB3P54753 SNORD45.1-201ENST00000363181 77 ntBASIC1.29□□□□□ -2.2
EPHB3P54753 SNORD75.2-201ENST00000408784 58 ntBASIC1.29□□□□□ -2.2
EPHB3P54753 AC002429.1-201ENST00000437672 148 ntBASIC1.29□□□□□ -2.2
EPHB3P54753 RNU6-881P-201ENST00000516813 102 ntBASIC1.29□□□□□ -2.2
EPHB3P54753 Y_RNA.118-201ENST00000363300 101 ntBASIC1.28□□□□□ -2.2
EPHB3P54753 RNU6-895P-201ENST00000384125 103 ntBASIC1.28□□□□□ -2.2
EPHB3P54753 RNU6-604P-201ENST00000390917 100 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms