Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.62□□□□□ -2.15
USP11P51784 U6.81-201ENST00000612550 106 ntBASIC1.62□□□□□ -2.15
USP11P51784 MIR499A-201ENST00000384903 122 ntBASIC1.61□□□□□ -2.15
USP11P51784 MIR1265-201ENST00000408444 86 ntBASIC1.61□□□□□ -2.15
USP11P51784 RNU7-90P-201ENST00000459216 62 ntBASIC1.61□□□□□ -2.15
USP11P51784 Y_RNA.32-201ENST00000362589 110 ntBASIC1.6□□□□□ -2.15
USP11P51784 RNU6-649P-201ENST00000384463 107 ntBASIC1.6□□□□□ -2.15
USP11P51784 RNU6-977P-201ENST00000516411 103 ntBASIC1.6□□□□□ -2.15
USP11P51784 SNORA31.14-201ENST00000516728 116 ntBASIC1.6□□□□□ -2.15
USP11P51784 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
USP11P51784 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.6□□□□□ -2.15
USP11P51784 uc_338.16-201ENST00000621804 95 ntBASIC1.6□□□□□ -2.15
USP11P51784 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
USP11P51784 Y_RNA.258-201ENST00000364613 105 ntBASIC1.59□□□□□ -2.15
USP11P51784 MIR154-201ENST00000385243 84 ntBASIC1.59□□□□□ -2.15
USP11P51784 MIR548AG2-201ENST00000581228 64 ntBASIC1.59□□□□□ -2.15
USP11P51784 AL157834.3-201ENST00000615543 103 ntBASIC1.59□□□□□ -2.15
USP11P51784 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
USP11P51784 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
USP11P51784 Y_RNA.327-201ENST00000365201 102 ntBASIC1.58□□□□□ -2.16
USP11P51784 RNU6-994P-201ENST00000410507 111 ntBASIC1.58□□□□□ -2.16
USP11P51784 MIR3675-201ENST00000583661 73 ntBASIC1.58□□□□□ -2.16
USP11P51784 RNA5SP403-201ENST00000363598 108 ntBASIC1.57□□□□□ -2.16
USP11P51784 RNU6-681P-201ENST00000364012 104 ntBASIC1.57□□□□□ -2.16
USP11P51784 MIR100-201ENST00000385259 80 ntBASIC1.57□□□□□ -2.16
USP11P51784 RNU1-119P-201ENST00000391122 165 ntBASIC1.57□□□□□ -2.16
USP11P51784 SNORD30.1-201ENST00000391309 70 ntBASIC1.57□□□□□ -2.16
USP11P51784 RPS29P23-201ENST00000458635 123 ntBASIC1.57□□□□□ -2.16
USP11P51784 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.57□□□□□ -2.16
USP11P51784 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.57□□□□□ -2.16
USP11P51784 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
USP11P51784 Y_RNA.340-201ENST00000365330 92 ntBASIC1.56□□□□□ -2.16
USP11P51784 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.56□□□□□ -2.16
USP11P51784 RNU7-161P-201ENST00000517289 62 ntBASIC1.56□□□□□ -2.16
USP11P51784 MIR4421-201ENST00000578133 69 ntBASIC1.56□□□□□ -2.16
USP11P51784 U6.111-201ENST00000636093 83 ntBASIC1.56□□□□□ -2.16
USP11P51784 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
USP11P51784 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.55□□□□□ -2.16
USP11P51784 MIR1-1-201ENST00000362147 71 ntBASIC1.55□□□□□ -2.16
USP11P51784 SNORA7.1-201ENST00000363750 139 ntBASIC1.55□□□□□ -2.16
USP11P51784 RNU6-800P-201ENST00000384473 103 ntBASIC1.55□□□□□ -2.16
USP11P51784 MIR520F-201ENST00000384824 87 ntBASIC1.55□□□□□ -2.16
USP11P51784 MIR150-201ENST00000385048 84 ntBASIC1.55□□□□□ -2.16
USP11P51784 RNU6-1177P-201ENST00000391058 104 ntBASIC1.55□□□□□ -2.16
USP11P51784 AC125388.1-201ENST00000459631 156 ntBASIC1.55□□□□□ -2.16
USP11P51784 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.55□□□□□ -2.16
USP11P51784 RNA5SP61-201ENST00000516453 100 ntBASIC1.55□□□□□ -2.16
USP11P51784 RNU1-92P-201ENST00000517017 135 ntBASIC1.55□□□□□ -2.16
USP11P51784 MIR3920-201ENST00000581751 86 ntBASIC1.55□□□□□ -2.16
USP11P51784 SNORD115-24-201ENST00000363528 82 ntBASIC1.54□□□□□ -2.16
USP11P51784 RNU6-382P-201ENST00000365181 106 ntBASIC1.54□□□□□ -2.16
USP11P51784 RNU6-663P-201ENST00000391105 106 ntBASIC1.54□□□□□ -2.16
USP11P51784 U3.27-201ENST00000391237 200 ntBASIC1.54□□□□□ -2.16
USP11P51784 MIR1827-201ENST00000408549 66 ntBASIC1.54□□□□□ -2.16
USP11P51784 SNORA70.22-201ENST00000517160 124 ntBASIC1.54□□□□□ -2.16
USP11P51784 MIR7111-201ENST00000619751 72 ntBASIC1.54□□□□□ -2.16
USP11P51784 SNORD115-22-201ENST00000364456 82 ntBASIC1.53□□□□□ -2.16
USP11P51784 RNU6-392P-201ENST00000364926 101 ntBASIC1.53□□□□□ -2.16
USP11P51784 SNORD115-44-201ENST00000365391 82 ntBASIC1.53□□□□□ -2.16
USP11P51784 RNU6-1126P-201ENST00000384002 107 ntBASIC1.53□□□□□ -2.16
USP11P51784 SNORD45A-201ENST00000384512 84 ntBASIC1.53□□□□□ -2.16
USP11P51784 AC002429.1-201ENST00000437672 148 ntBASIC1.53□□□□□ -2.16
USP11P51784 RMST_2.1-201ENST00000617263 136 ntBASIC1.53□□□□□ -2.16
USP11P51784 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
USP11P51784 SNORD45.1-201ENST00000363181 77 ntBASIC1.52□□□□□ -2.17
USP11P51784 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.52□□□□□ -2.17
USP11P51784 RNU7-13P-201ENST00000516413 62 ntBASIC1.52□□□□□ -2.17
USP11P51784 RNU6-1057P-201ENST00000517162 102 ntBASIC1.52□□□□□ -2.17
USP11P51784 MIR4773-1-201ENST00000637203 78 ntBASIC1.52□□□□□ -2.17
USP11P51784 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
USP11P51784 MIR758-201ENST00000390227 88 ntBASIC1.51□□□□□ -2.17
USP11P51784 RNU1-123P-201ENST00000458950 160 ntBASIC1.51□□□□□ -2.17
USP11P51784 MIR7974-201ENST00000615835 79 ntBASIC1.51□□□□□ -2.17
USP11P51784 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
USP11P51784 Y_RNA.174-201ENST00000363781 105 ntBASIC1.5□□□□□ -2.17
USP11P51784 MIR222-201ENST00000384992 110 ntBASIC1.5□□□□□ -2.17
USP11P51784 RNU6-955P-201ENST00000410497 104 ntBASIC1.5□□□□□ -2.17
USP11P51784 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.5□□□□□ -2.17
USP11P51784 Y_RNA.355-201ENST00000365462 98 ntBASIC1.49□□□□□ -2.17
USP11P51784 SNORD12-201ENST00000391002 90 ntBASIC1.49□□□□□ -2.17
USP11P51784 MIR3660-201ENST00000584845 100 ntBASIC1.49□□□□□ -2.17
USP11P51784 AC005520.4-201ENST00000604337 90 ntBASIC1.49□□□□□ -2.17
USP11P51784 AL136317.1-201ENST00000612653 226 ntBASIC1.49□□□□□ -2.17
USP11P51784 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
USP11P51784 Y_RNA.205-201ENST00000364128 113 ntBASIC1.48□□□□□ -2.17
USP11P51784 MIR644A-201ENST00000385262 94 ntBASIC1.48□□□□□ -2.17
USP11P51784 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.48□□□□□ -2.17
USP11P51784 AC002350.1-201ENST00000490759 375 ntBASIC1.48□□□□□ -2.17
USP11P51784 AL078603.1-201ENST00000603824 313 ntBASIC1.48□□□□□ -2.17
USP11P51784 RNA5SP327-201ENST00000362494 101 ntBASIC1.47□□□□□ -2.17
USP11P51784 Y_RNA.118-201ENST00000363300 101 ntBASIC1.47□□□□□ -2.17
USP11P51784 SNORD116-24-201ENST00000384549 92 ntBASIC1.47□□□□□ -2.17
USP11P51784 SNORA40.6-201ENST00000391153 128 ntBASIC1.47□□□□□ -2.17
USP11P51784 MIR1276-201ENST00000408707 83 ntBASIC1.47□□□□□ -2.17
USP11P51784 RNU7-104P-201ENST00000459398 79 ntBASIC1.47□□□□□ -2.17
USP11P51784 AL353770.2-201ENST00000620024 78 ntBASIC1.47□□□□□ -2.17
USP11P51784 MIR617-201ENST00000385030 97 ntBASIC1.46□□□□□ -2.18
USP11P51784 MIR519E-201ENST00000385075 84 ntBASIC1.46□□□□□ -2.18
USP11P51784 RNU6-604P-201ENST00000390917 100 ntBASIC1.46□□□□□ -2.18
USP11P51784 RNU6-881P-201ENST00000516813 102 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms