Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 RNU6-571P-201ENST00000384128 107 ntBASIC0.86□□□□□ -2.27
COL2A1P02458 RNU6-24P-201ENST00000384440 107 ntBASIC0.86□□□□□ -2.27
COL2A1P02458 RNU6-1065P-201ENST00000384513 106 ntBASIC0.86□□□□□ -2.27
COL2A1P02458 MIR508-201ENST00000384857 115 ntBASIC0.86□□□□□ -2.27
COL2A1P02458 MT-TN-201ENST00000387400 73 ntBASIC0.86□□□□□ -2.27
COL2A1P02458 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.86□□□□□ -2.27
COL2A1P02458 snoU13.17-201ENST00000458802 104 ntBASIC0.86□□□□□ -2.27
COL2A1P02458 MIR6082-201ENST00000613604 109 ntBASIC0.86□□□□□ -2.27
COL2A1P02458 Y_RNA.788-201ENST00000622394 112 ntBASIC0.86□□□□□ -2.27
COL2A1P02458 Y_RNA.283-201ENST00000364798 112 ntBASIC0.85□□□□□ -2.27
COL2A1P02458 RNU6-364P-201ENST00000384387 107 ntBASIC0.85□□□□□ -2.27
COL2A1P02458 MT-TF-201ENST00000387314 71 ntBASIC0.85□□□□□ -2.27
COL2A1P02458 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
COL2A1P02458 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.85□□□□□ -2.27
COL2A1P02458 MIR18B-201ENST00000454574 71 ntBASIC0.85□□□□□ -2.27
COL2A1P02458 MIR4796-201ENST00000580742 81 ntBASIC0.85□□□□□ -2.27
COL2A1P02458 MIR3140-201ENST00000583685 90 ntBASIC0.85□□□□□ -2.27
COL2A1P02458 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
COL2A1P02458 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
COL2A1P02458 RNU6-811P-201ENST00000384069 107 ntBASIC0.84□□□□□ -2.28
COL2A1P02458 Y_RNA.565-201ENST00000384719 101 ntBASIC0.84□□□□□ -2.28
COL2A1P02458 MIR125B2-201ENST00000385128 89 ntBASIC0.84□□□□□ -2.28
COL2A1P02458 RPS26P5-201ENST00000418544 335 ntBASIC0.84□□□□□ -2.28
COL2A1P02458 AC092628.1-201ENST00000436250 252 ntBASIC0.84□□□□□ -2.28
COL2A1P02458 Y_RNA.648-201ENST00000459455 110 ntBASIC0.84□□□□□ -2.28
COL2A1P02458 MIR4676-201ENST00000583078 72 ntBASIC0.84□□□□□ -2.28
COL2A1P02458 MIR4712-201ENST00000583750 82 ntBASIC0.84□□□□□ -2.28
COL2A1P02458 MIR6835-201ENST00000621552 64 ntBASIC0.84□□□□□ -2.28
COL2A1P02458 MIR664A-201ENST00000626086 82 ntBASIC0.84□□□□□ -2.28
COL2A1P02458 RNU6-535P-201ENST00000384722 107 ntBASIC0.83□□□□□ -2.28
COL2A1P02458 MIR100-201ENST00000385259 80 ntBASIC0.83□□□□□ -2.28
COL2A1P02458 RNU6-129P-201ENST00000391022 107 ntBASIC0.83□□□□□ -2.28
COL2A1P02458 RNU6-994P-201ENST00000410507 111 ntBASIC0.83□□□□□ -2.28
COL2A1P02458 RNU7-102P-201ENST00000458948 62 ntBASIC0.83□□□□□ -2.28
COL2A1P02458 Y_RNA.809-201ENST00000516058 95 ntBASIC0.83□□□□□ -2.28
COL2A1P02458 RNU6-977P-201ENST00000516411 103 ntBASIC0.83□□□□□ -2.28
COL2A1P02458 MIR3064-201ENST00000581130 66 ntBASIC0.83□□□□□ -2.28
COL2A1P02458 SNORA63.2-201ENST00000362603 126 ntBASIC0.82□□□□□ -2.28
COL2A1P02458 Y_RNA.491-201ENST00000384417 107 ntBASIC0.82□□□□□ -2.28
COL2A1P02458 SCARNA18B-201ENST00000458806 135 ntBASIC0.82□□□□□ -2.28
COL2A1P02458 RNU6-448P-201ENST00000517052 107 ntBASIC0.82□□□□□ -2.28
COL2A1P02458 AL627230.5-201ENST00000619807 58 ntBASIC0.82□□□□□ -2.28
COL2A1P02458 AC027335.2-201ENST00000624030 375 ntBASIC0.82□□□□□ -2.28
COL2A1P02458 U6.100-201ENST00000636230 99 ntBASIC0.82□□□□□ -2.28
COL2A1P02458 MIR4662A-201ENST00000637499 67 ntBASIC0.82□□□□□ -2.28
COL2A1P02458 MIR6866-201ENST00000638146 69 ntBASIC0.82□□□□□ -2.28
COL2A1P02458 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
COL2A1P02458 RNA5SP327-201ENST00000362494 101 ntBASIC0.81□□□□□ -2.28
COL2A1P02458 RNU6-369P-201ENST00000362515 102 ntBASIC0.81□□□□□ -2.28
COL2A1P02458 Y_RNA.371-201ENST00000365591 113 ntBASIC0.81□□□□□ -2.28
COL2A1P02458 MIR520F-201ENST00000384824 87 ntBASIC0.81□□□□□ -2.28
COL2A1P02458 RNU6-466P-201ENST00000391224 103 ntBASIC0.81□□□□□ -2.28
COL2A1P02458 RNU7-21P-201ENST00000459430 62 ntBASIC0.81□□□□□ -2.28
COL2A1P02458 FGF7P7-201ENST00000514120 227 ntBASIC0.81□□□□□ -2.28
COL2A1P02458 AC106800.4-201ENST00000614905 153 ntBASIC0.81□□□□□ -2.28
COL2A1P02458 TRDV1-202ENST00000621643 102 ntBASIC0.81□□□□□ -2.28
COL2A1P02458 RNA5SP347-201ENST00000362445 119 ntBASIC0.8□□□□□ -2.28
COL2A1P02458 MIR599-201ENST00000385069 95 ntBASIC0.8□□□□□ -2.28
COL2A1P02458 SNORD89-201ENST00000390981 114 ntBASIC0.8□□□□□ -2.28
COL2A1P02458 SNORD111-201ENST00000408139 94 ntBASIC0.8□□□□□ -2.28
COL2A1P02458 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.8□□□□□ -2.28
COL2A1P02458 OR2A41P-201ENST00000473586 105 ntBASIC0.8□□□□□ -2.28
COL2A1P02458 SNORA70.22-201ENST00000517160 124 ntBASIC0.8□□□□□ -2.28
COL2A1P02458 MIR4804-201ENST00000581683 73 ntBASIC0.8□□□□□ -2.28
COL2A1P02458 AC104996.3-201ENST00000590718 94 ntBASIC0.8□□□□□ -2.28
COL2A1P02458 MIR377-201ENST00000362145 69 ntBASIC0.8□□□□□ -2.28
COL2A1P02458 MIR1-1-201ENST00000362147 71 ntBASIC0.8□□□□□ -2.28
COL2A1P02458 Y_RNA.42-201ENST00000362660 108 ntBASIC0.8□□□□□ -2.28
COL2A1P02458 SNORD33-201ENST00000362761 85 ntBASIC0.8□□□□□ -2.28
COL2A1P02458 Y_RNA.56-201ENST00000362798 112 ntBASIC0.8□□□□□ -2.28
COL2A1P02458 RNU6-624P-201ENST00000363411 107 ntBASIC0.8□□□□□ -2.28
COL2A1P02458 RNU6-1229P-201ENST00000364295 107 ntBASIC0.8□□□□□ -2.28
COL2A1P02458 RNU6-291P-201ENST00000384720 107 ntBASIC0.8□□□□□ -2.28
COL2A1P02458 MIR644A-201ENST00000385262 94 ntBASIC0.8□□□□□ -2.28
COL2A1P02458 MIR938-201ENST00000401216 83 ntBASIC0.8□□□□□ -2.28
COL2A1P02458 RNU7-56P-201ENST00000458744 62 ntBASIC0.8□□□□□ -2.28
COL2A1P02458 RNU6-902P-201ENST00000517212 91 ntBASIC0.8□□□□□ -2.28
COL2A1P02458 MIR3134-201ENST00000579433 74 ntBASIC0.8□□□□□ -2.28
COL2A1P02458 MIR548H5-201ENST00000580314 60 ntBASIC0.8□□□□□ -2.28
COL2A1P02458 MIR4696-201ENST00000581431 70 ntBASIC0.8□□□□□ -2.28
COL2A1P02458 MIR4422-201ENST00000581938 83 ntBASIC0.8□□□□□ -2.28
COL2A1P02458 AC243829.3-201ENST00000622177 108 ntBASIC0.8□□□□□ -2.28
COL2A1P02458 MIR618-201ENST00000385287 98 ntBASIC0.79□□□□□ -2.28
COL2A1P02458 AC002429.1-201ENST00000437672 148 ntBASIC0.79□□□□□ -2.28
COL2A1P02458 RNU7-90P-201ENST00000459216 62 ntBASIC0.79□□□□□ -2.28
COL2A1P02458 SNORD79.1-201ENST00000516069 84 ntBASIC0.79□□□□□ -2.28
COL2A1P02458 SNORA31.14-201ENST00000516728 116 ntBASIC0.79□□□□□ -2.28
COL2A1P02458 RNU6-664P-201ENST00000362381 107 ntBASIC0.78□□□□□ -2.28
COL2A1P02458 RNU6-330P-201ENST00000363015 107 ntBASIC0.78□□□□□ -2.28
COL2A1P02458 RNA5SP499-201ENST00000363982 119 ntBASIC0.78□□□□□ -2.28
COL2A1P02458 SNORA80D-201ENST00000384488 135 ntBASIC0.78□□□□□ -2.28
COL2A1P02458 RNU1-119P-201ENST00000391122 165 ntBASIC0.78□□□□□ -2.28
COL2A1P02458 U7.4-201ENST00000614961 63 ntBASIC0.78□□□□□ -2.28
COL2A1P02458 Y_RNA.207-201ENST00000364142 106 ntBASIC0.77□□□□□ -2.29
COL2A1P02458 Y_RNA.239-201ENST00000364444 113 ntBASIC0.77□□□□□ -2.29
COL2A1P02458 SNORA25.8-201ENST00000364831 128 ntBASIC0.77□□□□□ -2.29
COL2A1P02458 RNU6-1051P-201ENST00000365471 102 ntBASIC0.77□□□□□ -2.29
COL2A1P02458 Y_RNA.532-201ENST00000384590 113 ntBASIC0.77□□□□□ -2.29
COL2A1P02458 MIR520H-201ENST00000385126 88 ntBASIC0.77□□□□□ -2.29
COL2A1P02458 MIR548U-201ENST00000390728 81 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 253.2 ms