Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RNU1-40P-201ENST00000516816 164 ntBASIC2.08□□□□□ -2.08
USB1Q9BQ65 RNU1-97P-201ENST00000516872 164 ntBASIC2.08□□□□□ -2.08
USB1Q9BQ65 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
USB1Q9BQ65 Y_RNA.32-201ENST00000362589 110 ntBASIC2.07□□□□□ -2.08
USB1Q9BQ65 RNU6-1126P-201ENST00000384002 107 ntBASIC2.07□□□□□ -2.08
USB1Q9BQ65 SNORD75.2-201ENST00000408784 58 ntBASIC2.07□□□□□ -2.08
USB1Q9BQ65 AL356379.1-201ENST00000414105 126 ntBASIC2.07□□□□□ -2.08
USB1Q9BQ65 HMGN2P19-201ENST00000425149 265 ntBASIC2.07□□□□□ -2.08
USB1Q9BQ65 RNA5SP233-201ENST00000459153 113 ntBASIC2.07□□□□□ -2.08
USB1Q9BQ65 AC008413.1-201ENST00000511864 177 ntBASIC2.07□□□□□ -2.08
USB1Q9BQ65 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.07□□□□□ -2.08
USB1Q9BQ65 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.07□□□□□ -2.08
USB1Q9BQ65 MIR1273D-201ENST00000577266 86 ntBASIC2.07□□□□□ -2.08
USB1Q9BQ65 uc_338.16-201ENST00000621804 95 ntBASIC2.07□□□□□ -2.08
USB1Q9BQ65 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
USB1Q9BQ65 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.06□□□□□ -2.08
USB1Q9BQ65 MIR1-1-201ENST00000362147 71 ntBASIC2.06□□□□□ -2.08
USB1Q9BQ65 RNA5SP403-201ENST00000363598 108 ntBASIC2.06□□□□□ -2.08
USB1Q9BQ65 Y_RNA.174-201ENST00000363781 105 ntBASIC2.06□□□□□ -2.08
USB1Q9BQ65 MIR216B-201ENST00000390186 82 ntBASIC2.06□□□□□ -2.08
USB1Q9BQ65 RNU6-910P-201ENST00000390844 107 ntBASIC2.06□□□□□ -2.08
USB1Q9BQ65 RNU4-37P-201ENST00000410214 84 ntBASIC2.06□□□□□ -2.08
USB1Q9BQ65 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.06□□□□□ -2.08
USB1Q9BQ65 MIR548AG2-201ENST00000581228 64 ntBASIC2.06□□□□□ -2.08
USB1Q9BQ65 AL359821.1-201ENST00000605519 182 ntBASIC2.06□□□□□ -2.08
USB1Q9BQ65 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
USB1Q9BQ65 MIR3920-201ENST00000581751 86 ntBASIC2.05□□□□□ -2.08
USB1Q9BQ65 MIR4422-201ENST00000581938 83 ntBASIC2.05□□□□□ -2.08
USB1Q9BQ65 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.05□□□□□ -2.08
USB1Q9BQ65 MIR520F-201ENST00000384824 87 ntBASIC2.04□□□□□ -2.08
USB1Q9BQ65 RNU7-24P-201ENST00000458867 62 ntBASIC2.04□□□□□ -2.08
USB1Q9BQ65 uc_338.20-201ENST00000621563 178 ntBASIC2.04□□□□□ -2.08
USB1Q9BQ65 MIR6132-201ENST00000622083 109 ntBASIC2.04□□□□□ -2.08
USB1Q9BQ65 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
USB1Q9BQ65 MIR21-201ENST00000362134 72 ntBASIC2.03□□□□□ -2.08
USB1Q9BQ65 RNU6-495P-201ENST00000362995 107 ntBASIC2.03□□□□□ -2.08
USB1Q9BQ65 MIR221-201ENST00000385135 110 ntBASIC2.03□□□□□ -2.08
USB1Q9BQ65 RNU6-982P-201ENST00000516216 102 ntBASIC2.03□□□□□ -2.08
USB1Q9BQ65 RNU7-161P-201ENST00000517289 62 ntBASIC2.03□□□□□ -2.08
USB1Q9BQ65 AC069503.3-201ENST00000618674 145 ntBASIC2.03□□□□□ -2.08
USB1Q9BQ65 MIR617-201ENST00000385030 97 ntBASIC2.02□□□□□ -2.09
USB1Q9BQ65 SNORA48.3-201ENST00000391081 134 ntBASIC2.02□□□□□ -2.09
USB1Q9BQ65 SNORA40.6-201ENST00000391153 128 ntBASIC2.02□□□□□ -2.09
USB1Q9BQ65 SNORA3.2-201ENST00000408221 125 ntBASIC2.02□□□□□ -2.09
USB1Q9BQ65 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.02□□□□□ -2.09
USB1Q9BQ65 SNORD79.1-201ENST00000516069 84 ntBASIC2.02□□□□□ -2.09
USB1Q9BQ65 RNA5SP200-201ENST00000516360 103 ntBASIC2.02□□□□□ -2.09
USB1Q9BQ65 AC046143.2-201ENST00000609789 160 ntBASIC2.02□□□□□ -2.09
USB1Q9BQ65 AL109933.3-201ENST00000619095 188 ntBASIC2.02□□□□□ -2.09
USB1Q9BQ65 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
USB1Q9BQ65 RNA5SP289-201ENST00000362332 137 ntBASIC2.01□□□□□ -2.09
USB1Q9BQ65 RNU6-1039P-201ENST00000383931 107 ntBASIC2.01□□□□□ -2.09
USB1Q9BQ65 AC110620.1-201ENST00000416042 228 ntBASIC2.01□□□□□ -2.09
USB1Q9BQ65 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.01□□□□□ -2.09
USB1Q9BQ65 RNU7-104P-201ENST00000459398 79 ntBASIC2.01□□□□□ -2.09
USB1Q9BQ65 NAMPTP3-201ENST00000569273 224 ntBASIC2.01□□□□□ -2.09
USB1Q9BQ65 MIR4648-201ENST00000580107 72 ntBASIC2.01□□□□□ -2.09
USB1Q9BQ65 MIR6509-201ENST00000614603 85 ntBASIC2.01□□□□□ -2.09
USB1Q9BQ65 MIR6873-201ENST00000622788 63 ntBASIC2.01□□□□□ -2.09
USB1Q9BQ65 MIR676-201ENST00000390702 67 ntBASIC2□□□□□ -2.09
USB1Q9BQ65 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2□□□□□ -2.09
USB1Q9BQ65 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2□□□□□ -2.09
USB1Q9BQ65 AC008834.1-201ENST00000511612 175 ntBASIC2□□□□□ -2.09
USB1Q9BQ65 RNU6-902P-201ENST00000517212 91 ntBASIC2□□□□□ -2.09
USB1Q9BQ65 MIR6766-201ENST00000622641 72 ntBASIC2□□□□□ -2.09
USB1Q9BQ65 MIRLET7G-201ENST00000362280 84 ntBASIC1.99□□□□□ -2.09
USB1Q9BQ65 RNU6-1187P-201ENST00000364771 110 ntBASIC1.99□□□□□ -2.09
USB1Q9BQ65 RNA5SP37-201ENST00000365420 130 ntBASIC1.99□□□□□ -2.09
USB1Q9BQ65 RNA5SP338-201ENST00000410495 85 ntBASIC1.99□□□□□ -2.09
USB1Q9BQ65 MTND4LP1-201ENST00000446263 157 ntBASIC1.99□□□□□ -2.09
USB1Q9BQ65 AC067940.1-201ENST00000458411 300 ntBASIC1.99□□□□□ -2.09
USB1Q9BQ65 RN7SKP223-201ENST00000410582 62 ntBASIC1.98□□□□□ -2.09
USB1Q9BQ65 AL096840.1-201ENST00000603287 93 ntBASIC1.98□□□□□ -2.09
USB1Q9BQ65 MIR548O2-201ENST00000616090 70 ntBASIC1.98□□□□□ -2.09
USB1Q9BQ65 MIR219B-201ENST00000637023 88 ntBASIC1.98□□□□□ -2.09
USB1Q9BQ65 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
USB1Q9BQ65 ZNF355P-201ENST00000427301 3216 ntBASIC1.97□□□□□ -2.09
USB1Q9BQ65 RNU6-668P-201ENST00000364180 107 ntBASIC1.97□□□□□ -2.09
USB1Q9BQ65 MIR203A-201ENST00000384836 110 ntBASIC1.97□□□□□ -2.09
USB1Q9BQ65 MIR519E-201ENST00000385075 84 ntBASIC1.97□□□□□ -2.09
USB1Q9BQ65 MIR1827-201ENST00000408549 66 ntBASIC1.97□□□□□ -2.09
USB1Q9BQ65 RNA5SP364-201ENST00000516938 78 ntBASIC1.97□□□□□ -2.09
USB1Q9BQ65 AC067863.3-201ENST00000624172 122 ntBASIC1.97□□□□□ -2.09
USB1Q9BQ65 RNU6-669P-201ENST00000365575 107 ntBASIC1.96□□□□□ -2.1
USB1Q9BQ65 AC104435.1-201ENST00000483483 166 ntBASIC1.96□□□□□ -2.1
USB1Q9BQ65 RMST_2.1-201ENST00000617263 136 ntBASIC1.96□□□□□ -2.1
USB1Q9BQ65 RNU1-123P-201ENST00000458950 160 ntBASIC1.95□□□□□ -2.1
USB1Q9BQ65 SNORA70.22-201ENST00000517160 124 ntBASIC1.95□□□□□ -2.1
USB1Q9BQ65 MIR4781-201ENST00000585250 76 ntBASIC1.95□□□□□ -2.1
USB1Q9BQ65 AC012493.3-201ENST00000604494 112 ntBASIC1.95□□□□□ -2.1
USB1Q9BQ65 AL136317.1-201ENST00000612653 226 ntBASIC1.95□□□□□ -2.1
USB1Q9BQ65 RNU6-54P-201ENST00000365563 107 ntBASIC1.94□□□□□ -2.1
USB1Q9BQ65 RNA5SP489-201ENST00000410986 109 ntBASIC1.94□□□□□ -2.1
USB1Q9BQ65 RNU6-717P-201ENST00000459076 104 ntBASIC1.94□□□□□ -2.1
USB1Q9BQ65 AC073869.9-201ENST00000641610 120 ntBASIC1.94□□□□□ -2.1
USB1Q9BQ65 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.92□□□□□ -2.1
USB1Q9BQ65 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
USB1Q9BQ65 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
USB1Q9BQ65 RNA5SP117-201ENST00000365294 118 ntBASIC1.91□□□□□ -2.1
USB1Q9BQ65 snoU13.15-201ENST00000459407 104 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 201 ms