Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.06□□□□□ -2.24
TIMP4Q99727 SNORD115-37-201ENST00000363768 82 ntBASIC1.05□□□□□ -2.24
TIMP4Q99727 MIR599-201ENST00000385069 95 ntBASIC1.05□□□□□ -2.24
TIMP4Q99727 MIR520H-201ENST00000385126 88 ntBASIC1.05□□□□□ -2.24
TIMP4Q99727 MIR1236-201ENST00000408340 102 ntBASIC1.05□□□□□ -2.24
TIMP4Q99727 AC093729.1-201ENST00000513074 128 ntBASIC1.05□□□□□ -2.24
TIMP4Q99727 AC138907.6-201ENST00000568401 126 ntBASIC1.05□□□□□ -2.24
TIMP4Q99727 AC138869.1-201ENST00000568623 124 ntBASIC1.05□□□□□ -2.24
TIMP4Q99727 MIR6504-201ENST00000613520 61 ntBASIC1.05□□□□□ -2.24
TIMP4Q99727 RMST_2.1-201ENST00000617263 136 ntBASIC1.05□□□□□ -2.24
TIMP4Q99727 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
TIMP4Q99727 RNU6-228P-201ENST00000362700 106 ntBASIC1.04□□□□□ -2.24
TIMP4Q99727 SNORA25.8-201ENST00000364831 128 ntBASIC1.04□□□□□ -2.24
TIMP4Q99727 Y_RNA.313-201ENST00000365095 103 ntBASIC1.04□□□□□ -2.24
TIMP4Q99727 Y_RNA.508-201ENST00000384502 114 ntBASIC1.04□□□□□ -2.24
TIMP4Q99727 MIR942-201ENST00000401111 86 ntBASIC1.04□□□□□ -2.24
TIMP4Q99727 MIR1255A-201ENST00000408338 113 ntBASIC1.04□□□□□ -2.24
TIMP4Q99727 AL606490.4-201ENST00000423117 127 ntBASIC1.04□□□□□ -2.24
TIMP4Q99727 SNORD124-201ENST00000459577 104 ntBASIC1.04□□□□□ -2.24
TIMP4Q99727 RNU7-171P-201ENST00000459581 62 ntBASIC1.04□□□□□ -2.24
TIMP4Q99727 OR2A41P-201ENST00000473586 105 ntBASIC1.04□□□□□ -2.24
TIMP4Q99727 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.03□□□□□ -2.24
TIMP4Q99727 MIRLET7F1-201ENST00000362202 87 ntBASIC1.03□□□□□ -2.24
TIMP4Q99727 Y_RNA.221-201ENST00000364248 96 ntBASIC1.03□□□□□ -2.24
TIMP4Q99727 RNU6-652P-201ENST00000365488 107 ntBASIC1.03□□□□□ -2.24
TIMP4Q99727 RNU6-811P-201ENST00000384069 107 ntBASIC1.03□□□□□ -2.24
TIMP4Q99727 RNU6-75P-201ENST00000515944 104 ntBASIC1.03□□□□□ -2.24
TIMP4Q99727 MIR4295-201ENST00000585286 85 ntBASIC1.03□□□□□ -2.24
TIMP4Q99727 TRDV1-202ENST00000621643 102 ntBASIC1.03□□□□□ -2.24
TIMP4Q99727 RNU6-1260P-201ENST00000362944 107 ntBASIC1.02□□□□□ -2.25
TIMP4Q99727 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
TIMP4Q99727 RNU6-787P-201ENST00000384032 107 ntBASIC1.02□□□□□ -2.25
TIMP4Q99727 RNA5SP292-201ENST00000390974 118 ntBASIC1.02□□□□□ -2.25
TIMP4Q99727 MIR1285-1-201ENST00000408593 84 ntBASIC1.02□□□□□ -2.25
TIMP4Q99727 RNA5SP225-201ENST00000410874 135 ntBASIC1.02□□□□□ -2.25
TIMP4Q99727 FABP5P4-201ENST00000437203 171 ntBASIC1.02□□□□□ -2.25
TIMP4Q99727 SNORA31.14-201ENST00000516728 116 ntBASIC1.02□□□□□ -2.25
TIMP4Q99727 AL136317.1-201ENST00000612653 226 ntBASIC1.02□□□□□ -2.25
TIMP4Q99727 MIR3202-2-201ENST00000635980 79 ntBASIC1.02□□□□□ -2.25
TIMP4Q99727 Y_RNA.32-201ENST00000362589 110 ntBASIC1.01□□□□□ -2.25
TIMP4Q99727 RNU6-132P-201ENST00000383863 107 ntBASIC1.01□□□□□ -2.25
TIMP4Q99727 MIR519A1-201ENST00000385257 85 ntBASIC1.01□□□□□ -2.25
TIMP4Q99727 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
TIMP4Q99727 Y_RNA.607-201ENST00000410597 98 ntBASIC1.01□□□□□ -2.25
TIMP4Q99727 AC097635.1-201ENST00000450678 155 ntBASIC1.01□□□□□ -2.25
TIMP4Q99727 AC087343.1-201ENST00000477341 475 ntBASIC1.01□□□□□ -2.25
TIMP4Q99727 SNORA25.13-201ENST00000516395 103 ntBASIC1□□□□□ -2.25
TIMP4Q99727 RNU6-1110P-201ENST00000516462 101 ntBASIC1□□□□□ -2.25
TIMP4Q99727 SNORA18.5-201ENST00000516616 101 ntBASIC1□□□□□ -2.25
TIMP4Q99727 RNA5SP404-201ENST00000517118 132 ntBASIC1□□□□□ -2.25
TIMP4Q99727 MIR4666B-201ENST00000578142 81 ntBASIC1□□□□□ -2.25
TIMP4Q99727 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
TIMP4Q99727 MIR96-201ENST00000362288 78 ntBASIC0.99□□□□□ -2.25
TIMP4Q99727 RNA5SP117-201ENST00000365294 118 ntBASIC0.99□□□□□ -2.25
TIMP4Q99727 MIR19B1-201ENST00000384829 87 ntBASIC0.99□□□□□ -2.25
TIMP4Q99727 SNORD105-201ENST00000386910 85 ntBASIC0.99□□□□□ -2.25
TIMP4Q99727 RNU6-1275P-201ENST00000391087 107 ntBASIC0.99□□□□□ -2.25
TIMP4Q99727 U7.7-201ENST00000459276 60 ntBASIC0.99□□□□□ -2.25
TIMP4Q99727 MIR3064-201ENST00000581130 66 ntBASIC0.99□□□□□ -2.25
TIMP4Q99727 AC104996.3-201ENST00000590718 94 ntBASIC0.99□□□□□ -2.25
TIMP4Q99727 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.99□□□□□ -2.25
TIMP4Q99727 uc_338.16-201ENST00000621804 95 ntBASIC0.99□□□□□ -2.25
TIMP4Q99727 SNORD114-27-201ENST00000363766 70 ntBASIC0.98□□□□□ -2.25
TIMP4Q99727 RNU6-1335P-201ENST00000365426 107 ntBASIC0.98□□□□□ -2.25
TIMP4Q99727 Y_RNA.491-201ENST00000384417 107 ntBASIC0.98□□□□□ -2.25
TIMP4Q99727 MIR644A-201ENST00000385262 94 ntBASIC0.98□□□□□ -2.25
TIMP4Q99727 MIR548U-201ENST00000390728 81 ntBASIC0.98□□□□□ -2.25
TIMP4Q99727 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
TIMP4Q99727 MIR4796-201ENST00000580742 81 ntBASIC0.98□□□□□ -2.25
TIMP4Q99727 U6.100-201ENST00000636230 99 ntBASIC0.98□□□□□ -2.25
TIMP4Q99727 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
TIMP4Q99727 SNORD115-24-201ENST00000363528 82 ntBASIC0.97□□□□□ -2.25
TIMP4Q99727 SNORD114-22-201ENST00000365423 72 ntBASIC0.97□□□□□ -2.25
TIMP4Q99727 MIR200A-201ENST00000384875 90 ntBASIC0.97□□□□□ -2.25
TIMP4Q99727 MIR518E-201ENST00000385252 88 ntBASIC0.97□□□□□ -2.25
TIMP4Q99727 AC002350.1-201ENST00000490759 375 ntBASIC0.97□□□□□ -2.25
TIMP4Q99727 Y_RNA.685-201ENST00000516532 108 ntBASIC0.97□□□□□ -2.25
TIMP4Q99727 AC140658.3-201ENST00000567603 271 ntBASIC0.97□□□□□ -2.25
TIMP4Q99727 MIR4452-201ENST00000583004 71 ntBASIC0.97□□□□□ -2.25
TIMP4Q99727 Y_RNA.174-201ENST00000363781 105 ntBASIC0.96□□□□□ -2.26
TIMP4Q99727 Y_RNA.316-201ENST00000365118 111 ntBASIC0.96□□□□□ -2.26
TIMP4Q99727 SNORD101-201ENST00000384027 73 ntBASIC0.96□□□□□ -2.26
TIMP4Q99727 AC244505.6-201ENST00000452829 130 ntBASIC0.96□□□□□ -2.26
TIMP4Q99727 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.96□□□□□ -2.26
TIMP4Q99727 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.95□□□□□ -2.26
TIMP4Q99727 RNU6-664P-201ENST00000362381 107 ntBASIC0.95□□□□□ -2.26
TIMP4Q99727 RNU1-124P-201ENST00000363861 145 ntBASIC0.95□□□□□ -2.26
TIMP4Q99727 Y_RNA.224-201ENST00000364308 111 ntBASIC0.95□□□□□ -2.26
TIMP4Q99727 Y_RNA.239-201ENST00000364444 113 ntBASIC0.95□□□□□ -2.26
TIMP4Q99727 RNU1-93P-201ENST00000364704 169 ntBASIC0.95□□□□□ -2.26
TIMP4Q99727 SNORD114-24-201ENST00000365029 72 ntBASIC0.95□□□□□ -2.26
TIMP4Q99727 AL450471.1-201ENST00000447509 127 ntBASIC0.95□□□□□ -2.26
TIMP4Q99727 MIR4696-201ENST00000581431 70 ntBASIC0.95□□□□□ -2.26
TIMP4Q99727 SNORD114-21-201ENST00000606412 72 ntBASIC0.95□□□□□ -2.26
TIMP4Q99727 SNORD90-201ENST00000391145 111 ntBASIC0.94□□□□□ -2.26
TIMP4Q99727 Y_RNA.596-201ENST00000410462 109 ntBASIC0.94□□□□□ -2.26
TIMP4Q99727 AC103810.9-201ENST00000606688 112 ntBASIC0.94□□□□□ -2.26
TIMP4Q99727 MIR3612-201ENST00000579753 87 ntBASIC0.93□□□□□ -2.26
TIMP4Q99727 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.93□□□□□ -2.26
TIMP4Q99727 RNU7-104P-201ENST00000459398 79 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 241.2 ms