Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 RNU6-1099P-201ENST00000363533 107 ntBASIC0.45□□□□□ -2.34
CENPAP49450 SNORD118-201ENST00000363593 134 ntBASIC0.45□□□□□ -2.34
CENPAP49450 Y_RNA.163-201ENST00000363702 113 ntBASIC0.45□□□□□ -2.34
CENPAP49450 RNU4-36P-201ENST00000364294 144 ntBASIC0.45□□□□□ -2.34
CENPAP49450 MIR193B-201ENST00000384907 83 ntBASIC0.45□□□□□ -2.34
CENPAP49450 MIR519A1-201ENST00000385257 85 ntBASIC0.45□□□□□ -2.34
CENPAP49450 RNU6-1254P-201ENST00000391266 104 ntBASIC0.45□□□□□ -2.34
CENPAP49450 RNU7-161P-201ENST00000517289 62 ntBASIC0.45□□□□□ -2.34
CENPAP49450 MIR4711-201ENST00000578274 70 ntBASIC0.45□□□□□ -2.34
CENPAP49450 AC067863.3-201ENST00000624172 122 ntBASIC0.45□□□□□ -2.34
CENPAP49450 MIR6828-201ENST00000636181 60 ntBASIC0.45□□□□□ -2.34
CENPAP49450 RNU6-1260P-201ENST00000362944 107 ntBASIC0.44□□□□□ -2.34
CENPAP49450 Y_RNA.173-201ENST00000363776 113 ntBASIC0.44□□□□□ -2.34
CENPAP49450 RNU6-524P-201ENST00000384270 107 ntBASIC0.44□□□□□ -2.34
CENPAP49450 RNU6-243P-201ENST00000391140 107 ntBASIC0.44□□□□□ -2.34
CENPAP49450 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.44□□□□□ -2.34
CENPAP49450 MIR1273G-201ENST00000577677 100 ntBASIC0.44□□□□□ -2.34
CENPAP49450 MIR7107-201ENST00000611489 80 ntBASIC0.44□□□□□ -2.34
CENPAP49450 SNORD45B-201ENST00000364617 72 ntBASIC0.43□□□□□ -2.34
CENPAP49450 RNA5SP193-201ENST00000410353 107 ntBASIC0.43□□□□□ -2.34
CENPAP49450 AC114737.2-201ENST00000421583 173 ntBASIC0.43□□□□□ -2.34
CENPAP49450 AC098934.3-201ENST00000430450 190 ntBASIC0.43□□□□□ -2.34
CENPAP49450 AC109327.2-201ENST00000448339 378 ntBASIC0.43□□□□□ -2.34
CENPAP49450 U2.22-201ENST00000636441 106 ntBASIC0.43□□□□□ -2.34
CENPAP49450 Y_RNA.10-201ENST00000362371 110 ntBASIC0.42□□□□□ -2.34
CENPAP49450 RNA5SP403-201ENST00000363598 108 ntBASIC0.42□□□□□ -2.34
CENPAP49450 RNU6-1125P-201ENST00000363601 107 ntBASIC0.42□□□□□ -2.34
CENPAP49450 RNA5SP457-201ENST00000363657 124 ntBASIC0.42□□□□□ -2.34
CENPAP49450 RNU6-1163P-201ENST00000364516 107 ntBASIC0.42□□□□□ -2.34
CENPAP49450 Y_RNA.273-201ENST00000364703 102 ntBASIC0.42□□□□□ -2.34
CENPAP49450 RNU6-480P-201ENST00000384332 107 ntBASIC0.42□□□□□ -2.34
CENPAP49450 MIR1302-5-201ENST00000408164 150 ntBASIC0.42□□□□□ -2.34
CENPAP49450 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
CENPAP49450 MIRLET7D-201ENST00000362263 87 ntBASIC0.41□□□□□ -2.34
CENPAP49450 MIR3613-201ENST00000579844 87 ntBASIC0.41□□□□□ -2.34
CENPAP49450 MIR548AI-201ENST00000579940 88 ntBASIC0.41□□□□□ -2.34
CENPAP49450 RNU6-86P-201ENST00000606534 107 ntBASIC0.41□□□□□ -2.34
CENPAP49450 MIR924-201ENST00000638017 53 ntBASIC0.41□□□□□ -2.34
CENPAP49450 MIR103A1-201ENST00000362165 78 ntBASIC0.4□□□□□ -2.35
CENPAP49450 RNU6-726P-201ENST00000364680 107 ntBASIC0.4□□□□□ -2.35
CENPAP49450 AC069271.1-201ENST00000445577 156 ntBASIC0.4□□□□□ -2.35
CENPAP49450 RNU7-13P-201ENST00000516413 62 ntBASIC0.4□□□□□ -2.35
CENPAP49450 AC243829.3-201ENST00000622177 108 ntBASIC0.4□□□□□ -2.35
CENPAP49450 RNA5SP499-201ENST00000363982 119 ntBASIC0.39□□□□□ -2.35
CENPAP49450 SNORA50A-201ENST00000384225 134 ntBASIC0.39□□□□□ -2.35
CENPAP49450 MIR181B2-201ENST00000385004 89 ntBASIC0.39□□□□□ -2.35
CENPAP49450 RNU2-59P-201ENST00000410482 191 ntBASIC0.39□□□□□ -2.35
CENPAP49450 RNU6-589P-201ENST00000516485 107 ntBASIC0.39□□□□□ -2.35
CENPAP49450 MIR5087-201ENST00000635826 76 ntBASIC0.39□□□□□ -2.35
CENPAP49450 MIR330-201ENST00000362196 94 ntBASIC0.38□□□□□ -2.35
CENPAP49450 SNORD36A-201ENST00000362874 73 ntBASIC0.38□□□□□ -2.35
CENPAP49450 SNORD44.1-201ENST00000363202 61 ntBASIC0.38□□□□□ -2.35
CENPAP49450 Y_RNA.601-201ENST00000410500 113 ntBASIC0.38□□□□□ -2.35
CENPAP49450 Y_RNA.629-201ENST00000411368 105 ntBASIC0.38□□□□□ -2.35
CENPAP49450 RNU6-1290P-201ENST00000362957 109 ntBASIC0.37□□□□□ -2.35
CENPAP49450 Y_RNA.95-201ENST00000363079 95 ntBASIC0.37□□□□□ -2.35
CENPAP49450 RNU6-1244P-201ENST00000363614 108 ntBASIC0.37□□□□□ -2.35
CENPAP49450 RNU6-1325P-201ENST00000364905 105 ntBASIC0.37□□□□□ -2.35
CENPAP49450 RNU6-1126P-201ENST00000384002 107 ntBASIC0.37□□□□□ -2.35
CENPAP49450 Y_RNA.423-201ENST00000384057 113 ntBASIC0.37□□□□□ -2.35
CENPAP49450 SNORA19.1-201ENST00000410656 129 ntBASIC0.37□□□□□ -2.35
CENPAP49450 Y_RNA.709-201ENST00000516952 92 ntBASIC0.37□□□□□ -2.35
CENPAP49450 MIR4439-201ENST00000583746 80 ntBASIC0.37□□□□□ -2.35
CENPAP49450 AL161932.1-201ENST00000437408 146 ntBASIC0.36□□□□□ -2.35
CENPAP49450 RNU6-795P-201ENST00000516323 103 ntBASIC0.36□□□□□ -2.35
CENPAP49450 uc_338.28-201ENST00000612082 187 ntBASIC0.36□□□□□ -2.35
CENPAP49450 Y_RNA.78-201ENST00000362970 110 ntBASIC0.35□□□□□ -2.35
CENPAP49450 SNORA51.5-201ENST00000384126 131 ntBASIC0.35□□□□□ -2.35
CENPAP49450 RNU6-1113P-201ENST00000384348 107 ntBASIC0.35□□□□□ -2.35
CENPAP49450 RNU6-466P-201ENST00000391224 103 ntBASIC0.35□□□□□ -2.35
CENPAP49450 RNU6-554P-201ENST00000410466 106 ntBASIC0.35□□□□□ -2.35
CENPAP49450 RNU6-863P-201ENST00000515989 104 ntBASIC0.35□□□□□ -2.35
CENPAP49450 SCARNA23-201ENST00000516060 130 ntBASIC0.35□□□□□ -2.35
CENPAP49450 RNA5SP330-201ENST00000517096 96 ntBASIC0.35□□□□□ -2.35
CENPAP49450 MIR4752-201ENST00000579672 72 ntBASIC0.35□□□□□ -2.35
CENPAP49450 AC243829.6-201ENST00000612652 106 ntBASIC0.35□□□□□ -2.35
CENPAP49450 TRDV1-202ENST00000621643 102 ntBASIC0.35□□□□□ -2.35
CENPAP49450 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.35□□□□□ -2.35
CENPAP49450 AC090625.1-201ENST00000357130 210 ntBASIC0.34□□□□□ -2.36
CENPAP49450 VTRNA1-3-201ENST00000365645 89 ntBASIC0.34□□□□□ -2.36
CENPAP49450 Y_RNA.467-201ENST00000384297 102 ntBASIC0.34□□□□□ -2.36
CENPAP49450 RNU6-106P-201ENST00000384405 107 ntBASIC0.34□□□□□ -2.36
CENPAP49450 RNU6-813P-201ENST00000384691 107 ntBASIC0.34□□□□□ -2.36
CENPAP49450 SNORD41.1-201ENST00000391000 69 ntBASIC0.34□□□□□ -2.36
CENPAP49450 RNU6-904P-201ENST00000516206 101 ntBASIC0.34□□□□□ -2.36
CENPAP49450 MIR3920-201ENST00000581751 86 ntBASIC0.34□□□□□ -2.36
CENPAP49450 MIR8087-201ENST00000612745 78 ntBASIC0.34□□□□□ -2.36
CENPAP49450 AC025521.1-201ENST00000621624 286 ntBASIC0.34□□□□□ -2.36
CENPAP49450 RNA5SP62-201ENST00000363457 110 ntBASIC0.33□□□□□ -2.36
CENPAP49450 RNU6-957P-201ENST00000363652 99 ntBASIC0.33□□□□□ -2.36
CENPAP49450 Y_RNA.258-201ENST00000364613 105 ntBASIC0.33□□□□□ -2.36
CENPAP49450 Y_RNA.291-201ENST00000364886 113 ntBASIC0.33□□□□□ -2.36
CENPAP49450 AC073261.1-201ENST00000429409 121 ntBASIC0.33□□□□□ -2.36
CENPAP49450 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.33□□□□□ -2.36
CENPAP49450 RNU6-1265P-201ENST00000516342 103 ntBASIC0.33□□□□□ -2.36
CENPAP49450 RNA5SP134-201ENST00000516492 96 ntBASIC0.33□□□□□ -2.36
CENPAP49450 MIR548Z-201ENST00000584743 97 ntBASIC0.33□□□□□ -2.36
CENPAP49450 AC012531.4-201ENST00000616509 177 ntBASIC0.33□□□□□ -2.36
CENPAP49450 AL162376.1-201ENST00000624117 175 ntBASIC0.33□□□□□ -2.36
CENPAP49450 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 252.8 ms