Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
GRIK1P39086 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
GRIK1P39086 RNA5SP245-201ENST00000364239 121 ntBASIC1.9□□□□□ -2.11
GRIK1P39086 SNORD1A-201ENST00000364968 72 ntBASIC1.9□□□□□ -2.11
GRIK1P39086 AC097510.1-201ENST00000510945 133 ntBASIC1.9□□□□□ -2.11
GRIK1P39086 MIR548H5-201ENST00000580314 60 ntBASIC1.9□□□□□ -2.11
GRIK1P39086 MIR6082-201ENST00000613604 109 ntBASIC1.9□□□□□ -2.11
GRIK1P39086 MIR377-201ENST00000362145 69 ntBASIC1.89□□□□□ -2.11
GRIK1P39086 RNA5SP264-201ENST00000363115 107 ntBASIC1.89□□□□□ -2.11
GRIK1P39086 RNY4P3-201ENST00000365254 95 ntBASIC1.89□□□□□ -2.11
GRIK1P39086 RNU6-1065P-201ENST00000384513 106 ntBASIC1.89□□□□□ -2.11
GRIK1P39086 RNU1-78P-201ENST00000391248 165 ntBASIC1.89□□□□□ -2.11
GRIK1P39086 MIR4422-201ENST00000581938 83 ntBASIC1.89□□□□□ -2.11
GRIK1P39086 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.89□□□□□ -2.11
GRIK1P39086 MIR8081-201ENST00000611533 95 ntBASIC1.89□□□□□ -2.11
GRIK1P39086 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
GRIK1P39086 Y_RNA.56-201ENST00000362798 112 ntBASIC1.88□□□□□ -2.11
GRIK1P39086 Y_RNA.164-201ENST00000363709 102 ntBASIC1.88□□□□□ -2.11
GRIK1P39086 MIR18B-201ENST00000454574 71 ntBASIC1.88□□□□□ -2.11
GRIK1P39086 RNU6-982P-201ENST00000516216 102 ntBASIC1.88□□□□□ -2.11
GRIK1P39086 SNORA25.15-201ENST00000516487 89 ntBASIC1.88□□□□□ -2.11
GRIK1P39086 MIR4511-201ENST00000582784 87 ntBASIC1.88□□□□□ -2.11
GRIK1P39086 MIR4773-1-201ENST00000637203 78 ntBASIC1.88□□□□□ -2.11
GRIK1P39086 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
GRIK1P39086 RNU6-1216P-201ENST00000362590 107 ntBASIC1.87□□□□□ -2.11
GRIK1P39086 RNU6-382P-201ENST00000365181 106 ntBASIC1.87□□□□□ -2.11
GRIK1P39086 MIR599-201ENST00000385069 95 ntBASIC1.87□□□□□ -2.11
GRIK1P39086 RNU6-935P-201ENST00000410371 100 ntBASIC1.87□□□□□ -2.11
GRIK1P39086 AL133373.1-201ENST00000497098 94 ntBASIC1.87□□□□□ -2.11
GRIK1P39086 RNU6-1265P-201ENST00000516342 103 ntBASIC1.87□□□□□ -2.11
GRIK1P39086 MIR4419B-201ENST00000577260 68 ntBASIC1.87□□□□□ -2.11
GRIK1P39086 MIR4498-201ENST00000577599 66 ntBASIC1.87□□□□□ -2.11
GRIK1P39086 AC110620.1-201ENST00000416042 228 ntBASIC1.86□□□□□ -2.11
GRIK1P39086 AC097635.1-201ENST00000450678 155 ntBASIC1.86□□□□□ -2.11
GRIK1P39086 MIR3122-201ENST00000577243 73 ntBASIC1.86□□□□□ -2.11
GRIK1P39086 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
GRIK1P39086 RNU6-1187P-201ENST00000364771 110 ntBASIC1.85□□□□□ -2.11
GRIK1P39086 RNA5SP190-201ENST00000365222 118 ntBASIC1.85□□□□□ -2.11
GRIK1P39086 SNORA17.3-201ENST00000391159 129 ntBASIC1.85□□□□□ -2.11
GRIK1P39086 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.85□□□□□ -2.11
GRIK1P39086 MIR1257-201ENST00000408490 117 ntBASIC1.85□□□□□ -2.11
GRIK1P39086 RNU6-141P-201ENST00000410499 105 ntBASIC1.85□□□□□ -2.11
GRIK1P39086 RNU6-1053P-201ENST00000515930 101 ntBASIC1.85□□□□□ -2.11
GRIK1P39086 MIR3937-201ENST00000580135 106 ntBASIC1.85□□□□□ -2.11
GRIK1P39086 MIR8053-201ENST00000613344 75 ntBASIC1.85□□□□□ -2.11
GRIK1P39086 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
GRIK1P39086 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
GRIK1P39086 SNORA40.6-201ENST00000391153 128 ntBASIC1.84□□□□□ -2.11
GRIK1P39086 AC079150.2-201ENST00000443733 78 ntBASIC1.84□□□□□ -2.11
GRIK1P39086 SNORD13-201ENST00000459299 104 ntBASIC1.84□□□□□ -2.11
GRIK1P39086 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.83□□□□□ -2.12
GRIK1P39086 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
GRIK1P39086 RNU6-1177P-201ENST00000391058 104 ntBASIC1.83□□□□□ -2.12
GRIK1P39086 AC108667.1-201ENST00000428618 249 ntBASIC1.83□□□□□ -2.12
GRIK1P39086 RNU6-977P-201ENST00000516411 103 ntBASIC1.83□□□□□ -2.12
GRIK1P39086 MIR502-201ENST00000606349 86 ntBASIC1.83□□□□□ -2.12
GRIK1P39086 RNU7-10P-201ENST00000607194 63 ntBASIC1.83□□□□□ -2.12
GRIK1P39086 MIR4285-201ENST00000581001 85 ntBASIC1.82□□□□□ -2.12
GRIK1P39086 AL645939.4-201ENST00000604495 135 ntBASIC1.82□□□□□ -2.12
GRIK1P39086 AC103706.3-201ENST00000636297 85 ntBASIC1.82□□□□□ -2.12
GRIK1P39086 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
GRIK1P39086 RNU6-287P-201ENST00000516230 98 ntBASIC1.81□□□□□ -2.12
GRIK1P39086 RNU6-165P-201ENST00000517170 99 ntBASIC1.81□□□□□ -2.12
GRIK1P39086 AC019176.1-201ENST00000518519 225 ntBASIC1.81□□□□□ -2.12
GRIK1P39086 MIR4771-2-201ENST00000577758 74 ntBASIC1.81□□□□□ -2.12
GRIK1P39086 MIR4771-1-201ENST00000582617 74 ntBASIC1.81□□□□□ -2.12
GRIK1P39086 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
GRIK1P39086 AC244098.3-201ENST00000424803 96 ntBASIC1.8□□□□□ -2.12
GRIK1P39086 RNU6-902P-201ENST00000517212 91 ntBASIC1.8□□□□□ -2.12
GRIK1P39086 snoU13.31-201ENST00000607291 104 ntBASIC1.8□□□□□ -2.12
GRIK1P39086 RNU6-934P-201ENST00000365154 107 ntBASIC1.79□□□□□ -2.12
GRIK1P39086 Y_RNA.330-201ENST00000365230 109 ntBASIC1.79□□□□□ -2.12
GRIK1P39086 RNU6-614P-201ENST00000384369 107 ntBASIC1.79□□□□□ -2.12
GRIK1P39086 MIR125B2-201ENST00000385128 89 ntBASIC1.79□□□□□ -2.12
GRIK1P39086 RNU6-274P-201ENST00000459566 107 ntBASIC1.79□□□□□ -2.12
GRIK1P39086 AC138907.6-201ENST00000568401 126 ntBASIC1.79□□□□□ -2.12
GRIK1P39086 AC138869.1-201ENST00000568623 124 ntBASIC1.79□□□□□ -2.12
GRIK1P39086 U6.59-201ENST00000615686 107 ntBASIC1.79□□□□□ -2.12
GRIK1P39086 MIR378A-201ENST00000362177 66 ntBASIC1.78□□□□□ -2.12
GRIK1P39086 RNU6-829P-201ENST00000363700 112 ntBASIC1.78□□□□□ -2.12
GRIK1P39086 Y_RNA.226-201ENST00000364337 114 ntBASIC1.78□□□□□ -2.12
GRIK1P39086 RNU6-535P-201ENST00000384722 107 ntBASIC1.78□□□□□ -2.12
GRIK1P39086 MIR203A-201ENST00000384836 110 ntBASIC1.78□□□□□ -2.12
GRIK1P39086 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.78□□□□□ -2.12
GRIK1P39086 RNU6-765P-201ENST00000516916 99 ntBASIC1.78□□□□□ -2.12
GRIK1P39086 AC036111.3-201ENST00000526389 112 ntBASIC1.78□□□□□ -2.12
GRIK1P39086 NAMPTP3-201ENST00000569273 224 ntBASIC1.78□□□□□ -2.12
GRIK1P39086 MIR3664-201ENST00000579074 99 ntBASIC1.78□□□□□ -2.12
GRIK1P39086 MIR548AG2-201ENST00000581228 64 ntBASIC1.78□□□□□ -2.12
GRIK1P39086 MIR4781-201ENST00000585250 76 ntBASIC1.78□□□□□ -2.12
GRIK1P39086 AL078603.1-201ENST00000603824 313 ntBASIC1.78□□□□□ -2.12
GRIK1P39086 RNU6-669P-201ENST00000365575 107 ntBASIC1.77□□□□□ -2.13
GRIK1P39086 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.77□□□□□ -2.13
GRIK1P39086 RNU7-40P-201ENST00000516397 64 ntBASIC1.77□□□□□ -2.13
GRIK1P39086 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.77□□□□□ -2.13
GRIK1P39086 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
GRIK1P39086 SNORA75.2-201ENST00000391138 150 ntBASIC1.76□□□□□ -2.13
GRIK1P39086 SNORA75.3-201ENST00000391231 150 ntBASIC1.76□□□□□ -2.13
GRIK1P39086 AL512310.8-201ENST00000550183 120 ntBASIC1.76□□□□□ -2.13
GRIK1P39086 AC008608.1-201ENST00000603910 127 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms