Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 RNU6-535P-201ENST00000384722 107 ntBASIC1.3□□□□□ -2.2
FOXS1O43638 MIR599-201ENST00000385069 95 ntBASIC1.3□□□□□ -2.2
FOXS1O43638 SNORD77.2-201ENST00000391045 68 ntBASIC1.3□□□□□ -2.2
FOXS1O43638 SNORD90-201ENST00000391145 111 ntBASIC1.3□□□□□ -2.2
FOXS1O43638 MIR4804-201ENST00000581683 73 ntBASIC1.3□□□□□ -2.2
FOXS1O43638 MTRNR2L2-201ENST00000604882 87 ntBASIC1.3□□□□□ -2.2
FOXS1O43638 RNU6-664P-201ENST00000362381 107 ntBASIC1.29□□□□□ -2.2
FOXS1O43638 SNORA7.1-201ENST00000363750 139 ntBASIC1.29□□□□□ -2.2
FOXS1O43638 RNA5SP245-201ENST00000364239 121 ntBASIC1.29□□□□□ -2.2
FOXS1O43638 Y_RNA.239-201ENST00000364444 113 ntBASIC1.29□□□□□ -2.2
FOXS1O43638 RNU6-994P-201ENST00000410507 111 ntBASIC1.29□□□□□ -2.2
FOXS1O43638 RNU7-102P-201ENST00000458948 62 ntBASIC1.29□□□□□ -2.2
FOXS1O43638 MIR4696-201ENST00000581431 70 ntBASIC1.29□□□□□ -2.2
FOXS1O43638 U6.100-201ENST00000636230 99 ntBASIC1.29□□□□□ -2.2
FOXS1O43638 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.29□□□□□ -2.2
FOXS1O43638 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.29□□□□□ -2.2
FOXS1O43638 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
FOXS1O43638 RNU6-208P-201ENST00000362431 107 ntBASIC1.28□□□□□ -2.2
FOXS1O43638 SNORD101-201ENST00000384027 73 ntBASIC1.28□□□□□ -2.2
FOXS1O43638 Y_RNA.545-201ENST00000384652 105 ntBASIC1.28□□□□□ -2.2
FOXS1O43638 Y_RNA.565-201ENST00000384719 101 ntBASIC1.28□□□□□ -2.2
FOXS1O43638 RNU7-56P-201ENST00000458744 62 ntBASIC1.28□□□□□ -2.2
FOXS1O43638 RNU6-1265P-201ENST00000516342 103 ntBASIC1.28□□□□□ -2.2
FOXS1O43638 SNORA70.22-201ENST00000517160 124 ntBASIC1.28□□□□□ -2.2
FOXS1O43638 AC068338.1-201ENST00000565567 176 ntBASIC1.28□□□□□ -2.2
FOXS1O43638 AC008608.1-201ENST00000603910 127 ntBASIC1.28□□□□□ -2.2
FOXS1O43638 Y_RNA.788-201ENST00000622394 112 ntBASIC1.28□□□□□ -2.2
FOXS1O43638 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
FOXS1O43638 Y_RNA.338-201ENST00000365320 114 ntBASIC1.27□□□□□ -2.21
FOXS1O43638 RNU6-1051P-201ENST00000365471 102 ntBASIC1.27□□□□□ -2.21
FOXS1O43638 SNORD12-201ENST00000391002 90 ntBASIC1.27□□□□□ -2.21
FOXS1O43638 AC244505.6-201ENST00000452829 130 ntBASIC1.27□□□□□ -2.21
FOXS1O43638 SCARNA18B-201ENST00000458806 135 ntBASIC1.27□□□□□ -2.21
FOXS1O43638 RNU1-123P-201ENST00000458950 160 ntBASIC1.27□□□□□ -2.21
FOXS1O43638 RNU6-977P-201ENST00000516411 103 ntBASIC1.27□□□□□ -2.21
FOXS1O43638 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
FOXS1O43638 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
FOXS1O43638 MIR1-1-201ENST00000362147 71 ntBASIC1.26□□□□□ -2.21
FOXS1O43638 Y_RNA.532-201ENST00000384590 113 ntBASIC1.26□□□□□ -2.21
FOXS1O43638 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.26□□□□□ -2.21
FOXS1O43638 Y_RNA.596-201ENST00000410462 109 ntBASIC1.26□□□□□ -2.21
FOXS1O43638 AL359821.1-201ENST00000605519 182 ntBASIC1.26□□□□□ -2.21
FOXS1O43638 MIR1297-201ENST00000637311 77 ntBASIC1.26□□□□□ -2.21
FOXS1O43638 MIR100-201ENST00000385259 80 ntBASIC1.25□□□□□ -2.21
FOXS1O43638 RNU1-119P-201ENST00000391122 165 ntBASIC1.25□□□□□ -2.21
FOXS1O43638 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.25□□□□□ -2.21
FOXS1O43638 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.25□□□□□ -2.21
FOXS1O43638 AC004223.1-201ENST00000479840 271 ntBASIC1.25□□□□□ -2.21
FOXS1O43638 AC139453.2-201ENST00000487255 133 ntBASIC1.25□□□□□ -2.21
FOXS1O43638 RNU6-807P-201ENST00000516805 107 ntBASIC1.25□□□□□ -2.21
FOXS1O43638 MIR4285-201ENST00000581001 85 ntBASIC1.25□□□□□ -2.21
FOXS1O43638 MIR3660-201ENST00000584845 100 ntBASIC1.25□□□□□ -2.21
FOXS1O43638 RNY4P3-201ENST00000365254 95 ntBASIC1.24□□□□□ -2.21
FOXS1O43638 MIR1827-201ENST00000408549 66 ntBASIC1.24□□□□□ -2.21
FOXS1O43638 snoU13.17-201ENST00000458802 104 ntBASIC1.24□□□□□ -2.21
FOXS1O43638 RNU6-523P-201ENST00000516304 54 ntBASIC1.24□□□□□ -2.21
FOXS1O43638 RNU6-303P-201ENST00000517091 106 ntBASIC1.24□□□□□ -2.21
FOXS1O43638 MIR4781-201ENST00000585250 76 ntBASIC1.24□□□□□ -2.21
FOXS1O43638 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.24□□□□□ -2.21
FOXS1O43638 AL353770.2-201ENST00000620024 78 ntBASIC1.24□□□□□ -2.21
FOXS1O43638 RNU5F-1-201ENST00000362507 117 ntBASIC1.23□□□□□ -2.21
FOXS1O43638 Y_RNA.207-201ENST00000364142 106 ntBASIC1.23□□□□□ -2.21
FOXS1O43638 MIR758-201ENST00000390227 88 ntBASIC1.23□□□□□ -2.21
FOXS1O43638 SNORA40.6-201ENST00000391153 128 ntBASIC1.23□□□□□ -2.21
FOXS1O43638 RNU6-935P-201ENST00000410371 100 ntBASIC1.23□□□□□ -2.21
FOXS1O43638 AC074348.1-201ENST00000426503 132 ntBASIC1.23□□□□□ -2.21
FOXS1O43638 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.23□□□□□ -2.21
FOXS1O43638 MIR3134-201ENST00000579433 74 ntBASIC1.23□□□□□ -2.21
FOXS1O43638 YWHAEP2-201ENST00000580066 112 ntBASIC1.23□□□□□ -2.21
FOXS1O43638 YWHAEP3-201ENST00000582767 121 ntBASIC1.23□□□□□ -2.21
FOXS1O43638 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
FOXS1O43638 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
FOXS1O43638 Y_RNA.12-201ENST00000362393 112 ntBASIC1.22□□□□□ -2.21
FOXS1O43638 RNU6-997P-201ENST00000384725 107 ntBASIC1.22□□□□□ -2.21
FOXS1O43638 MIR520F-201ENST00000384824 87 ntBASIC1.22□□□□□ -2.21
FOXS1O43638 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.22□□□□□ -2.21
FOXS1O43638 AC002429.1-201ENST00000437672 148 ntBASIC1.22□□□□□ -2.21
FOXS1O43638 AC067940.1-201ENST00000458411 300 ntBASIC1.22□□□□□ -2.21
FOXS1O43638 RNU6-1053P-201ENST00000515930 101 ntBASIC1.22□□□□□ -2.21
FOXS1O43638 AL157834.3-201ENST00000615543 103 ntBASIC1.22□□□□□ -2.21
FOXS1O43638 MIR7974-201ENST00000615835 79 ntBASIC1.22□□□□□ -2.21
FOXS1O43638 uc_338.16-201ENST00000621804 95 ntBASIC1.22□□□□□ -2.21
FOXS1O43638 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
FOXS1O43638 RNU6-321P-201ENST00000410912 106 ntBASIC1.21□□□□□ -2.22
FOXS1O43638 SNORA31.14-201ENST00000516728 116 ntBASIC1.21□□□□□ -2.22
FOXS1O43638 MIR4484-201ENST00000582855 83 ntBASIC1.21□□□□□ -2.22
FOXS1O43638 MIR3140-201ENST00000583685 90 ntBASIC1.21□□□□□ -2.22
FOXS1O43638 RMST_2.1-201ENST00000617263 136 ntBASIC1.21□□□□□ -2.22
FOXS1O43638 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
FOXS1O43638 Y_RNA.32-201ENST00000362589 110 ntBASIC1.2□□□□□ -2.22
FOXS1O43638 Y_RNA.174-201ENST00000363781 105 ntBASIC1.2□□□□□ -2.22
FOXS1O43638 Y_RNA.327-201ENST00000365201 102 ntBASIC1.2□□□□□ -2.22
FOXS1O43638 RNU6-411P-201ENST00000384451 107 ntBASIC1.2□□□□□ -2.22
FOXS1O43638 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
FOXS1O43638 SNORD115-44-201ENST00000365391 82 ntBASIC1.19□□□□□ -2.22
FOXS1O43638 SNORA24B-201ENST00000384176 131 ntBASIC1.19□□□□□ -2.22
FOXS1O43638 SNORA25-201ENST00000384384 134 ntBASIC1.19□□□□□ -2.22
FOXS1O43638 MIR222-201ENST00000384992 110 ntBASIC1.19□□□□□ -2.22
FOXS1O43638 RPS29P23-201ENST00000458635 123 ntBASIC1.19□□□□□ -2.22
FOXS1O43638 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 226.3 ms