Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC104984.5-201ENST00000586878 94 ntBASIC1.65□□□□□ -2.15
SSU72Q9NP77 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.65□□□□□ -2.15
SSU72Q9NP77 Y_RNA.788-201ENST00000622394 112 ntBASIC1.65□□□□□ -2.15
SSU72Q9NP77 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
SSU72Q9NP77 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
SSU72Q9NP77 SNORA80D-201ENST00000384488 135 ntBASIC1.64□□□□□ -2.15
SSU72Q9NP77 SNORA3.2-201ENST00000408221 125 ntBASIC1.64□□□□□ -2.15
SSU72Q9NP77 AC008608.1-201ENST00000603910 127 ntBASIC1.64□□□□□ -2.15
SSU72Q9NP77 RNU7-10P-201ENST00000607194 63 ntBASIC1.64□□□□□ -2.15
SSU72Q9NP77 AC145423.2-201ENST00000610631 239 ntBASIC1.64□□□□□ -2.15
SSU72Q9NP77 TRDV1-202ENST00000621643 102 ntBASIC1.64□□□□□ -2.15
SSU72Q9NP77 RNU6-161P-201ENST00000363051 106 ntBASIC1.63□□□□□ -2.15
SSU72Q9NP77 RNU6-291P-201ENST00000384720 107 ntBASIC1.63□□□□□ -2.15
SSU72Q9NP77 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SSU72Q9NP77 Y_RNA.532-201ENST00000384590 113 ntBASIC1.62□□□□□ -2.15
SSU72Q9NP77 RNU6-1108P-201ENST00000516308 104 ntBASIC1.62□□□□□ -2.15
SSU72Q9NP77 MIR4648-201ENST00000580107 72 ntBASIC1.62□□□□□ -2.15
SSU72Q9NP77 MIR4804-201ENST00000581683 73 ntBASIC1.62□□□□□ -2.15
SSU72Q9NP77 U6.100-201ENST00000636230 99 ntBASIC1.62□□□□□ -2.15
SSU72Q9NP77 RNU6-686P-201ENST00000364839 107 ntBASIC1.61□□□□□ -2.15
SSU72Q9NP77 MIR548U-201ENST00000390728 81 ntBASIC1.61□□□□□ -2.15
SSU72Q9NP77 MIR1261-201ENST00000408659 82 ntBASIC1.61□□□□□ -2.15
SSU72Q9NP77 AC097635.1-201ENST00000450678 155 ntBASIC1.61□□□□□ -2.15
SSU72Q9NP77 RNU7-56P-201ENST00000458744 62 ntBASIC1.61□□□□□ -2.15
SSU72Q9NP77 RNU7-102P-201ENST00000458948 62 ntBASIC1.61□□□□□ -2.15
SSU72Q9NP77 RNU7-90P-201ENST00000459216 62 ntBASIC1.61□□□□□ -2.15
SSU72Q9NP77 RNU1-41P-201ENST00000516161 162 ntBASIC1.61□□□□□ -2.15
SSU72Q9NP77 RNU1-48P-201ENST00000516400 162 ntBASIC1.61□□□□□ -2.15
SSU72Q9NP77 MIR4696-201ENST00000581431 70 ntBASIC1.61□□□□□ -2.15
SSU72Q9NP77 MTRNR2L2-201ENST00000604882 87 ntBASIC1.61□□□□□ -2.15
SSU72Q9NP77 AC027335.2-201ENST00000624030 375 ntBASIC1.61□□□□□ -2.15
SSU72Q9NP77 MIR938-201ENST00000401216 83 ntBASIC1.6□□□□□ -2.15
SSU72Q9NP77 snoU13.17-201ENST00000458802 104 ntBASIC1.6□□□□□ -2.15
SSU72Q9NP77 SCARNA18B-201ENST00000458806 135 ntBASIC1.6□□□□□ -2.15
SSU72Q9NP77 RNU6-523P-201ENST00000516304 54 ntBASIC1.6□□□□□ -2.15
SSU72Q9NP77 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.6□□□□□ -2.15
SSU72Q9NP77 MIR599-201ENST00000385069 95 ntBASIC1.59□□□□□ -2.15
SSU72Q9NP77 MIR320A-201ENST00000385302 82 ntBASIC1.59□□□□□ -2.15
SSU72Q9NP77 FGF7P7-201ENST00000514120 227 ntBASIC1.59□□□□□ -2.15
SSU72Q9NP77 RNU6-1265P-201ENST00000516342 103 ntBASIC1.59□□□□□ -2.15
SSU72Q9NP77 AC138907.6-201ENST00000568401 126 ntBASIC1.59□□□□□ -2.15
SSU72Q9NP77 AC138869.1-201ENST00000568623 124 ntBASIC1.59□□□□□ -2.15
SSU72Q9NP77 MIR6715A-201ENST00000615929 79 ntBASIC1.59□□□□□ -2.15
SSU72Q9NP77 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SSU72Q9NP77 RNU6-664P-201ENST00000362381 107 ntBASIC1.58□□□□□ -2.16
SSU72Q9NP77 RNU6-1094P-201ENST00000362416 104 ntBASIC1.58□□□□□ -2.16
SSU72Q9NP77 RNU6-535P-201ENST00000384722 107 ntBASIC1.58□□□□□ -2.16
SSU72Q9NP77 snoU13.26-201ENST00000459452 105 ntBASIC1.58□□□□□ -2.16
SSU72Q9NP77 U7.4-201ENST00000614961 63 ntBASIC1.58□□□□□ -2.16
SSU72Q9NP77 AC084768.2-201ENST00000622736 221 ntBASIC1.58□□□□□ -2.16
SSU72Q9NP77 RNU6-364P-201ENST00000384387 107 ntBASIC1.57□□□□□ -2.16
SSU72Q9NP77 RNU6-997P-201ENST00000384725 107 ntBASIC1.57□□□□□ -2.16
SSU72Q9NP77 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.57□□□□□ -2.16
SSU72Q9NP77 Y_RNA.565-201ENST00000384719 101 ntBASIC1.56□□□□□ -2.16
SSU72Q9NP77 MIR504-201ENST00000385065 83 ntBASIC1.56□□□□□ -2.16
SSU72Q9NP77 AC244505.6-201ENST00000452829 130 ntBASIC1.56□□□□□ -2.16
SSU72Q9NP77 AC004223.1-201ENST00000479840 271 ntBASIC1.56□□□□□ -2.16
SSU72Q9NP77 Y_RNA.660-201ENST00000516002 120 ntBASIC1.56□□□□□ -2.16
SSU72Q9NP77 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SSU72Q9NP77 RNU6-1051P-201ENST00000365471 102 ntBASIC1.55□□□□□ -2.16
SSU72Q9NP77 SNORD77.2-201ENST00000391045 68 ntBASIC1.55□□□□□ -2.16
SSU72Q9NP77 AC002429.1-201ENST00000437672 148 ntBASIC1.55□□□□□ -2.16
SSU72Q9NP77 RNU6-977P-201ENST00000516411 103 ntBASIC1.55□□□□□ -2.16
SSU72Q9NP77 SNORA70.22-201ENST00000517160 124 ntBASIC1.55□□□□□ -2.16
SSU72Q9NP77 MIR4781-201ENST00000585250 76 ntBASIC1.55□□□□□ -2.16
SSU72Q9NP77 SNORD101-201ENST00000384027 73 ntBASIC1.54□□□□□ -2.16
SSU72Q9NP77 snoU13.15-201ENST00000459407 104 ntBASIC1.54□□□□□ -2.16
SSU72Q9NP77 MIR3134-201ENST00000579433 74 ntBASIC1.54□□□□□ -2.16
SSU72Q9NP77 MIR4285-201ENST00000581001 85 ntBASIC1.54□□□□□ -2.16
SSU72Q9NP77 MIR3140-201ENST00000583685 90 ntBASIC1.54□□□□□ -2.16
SSU72Q9NP77 uc_338.16-201ENST00000621804 95 ntBASIC1.54□□□□□ -2.16
SSU72Q9NP77 RNU6-208P-201ENST00000362431 107 ntBASIC1.53□□□□□ -2.16
SSU72Q9NP77 Y_RNA.239-201ENST00000364444 113 ntBASIC1.53□□□□□ -2.16
SSU72Q9NP77 MIR1827-201ENST00000408549 66 ntBASIC1.53□□□□□ -2.16
SSU72Q9NP77 RNU6-994P-201ENST00000410507 111 ntBASIC1.53□□□□□ -2.16
SSU72Q9NP77 AC139453.2-201ENST00000487255 133 ntBASIC1.53□□□□□ -2.16
SSU72Q9NP77 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
SSU72Q9NP77 RNA5SP327-201ENST00000362494 101 ntBASIC1.52□□□□□ -2.17
SSU72Q9NP77 Y_RNA.32-201ENST00000362589 110 ntBASIC1.52□□□□□ -2.17
SSU72Q9NP77 SNORD114-1-201ENST00000362705 72 ntBASIC1.52□□□□□ -2.17
SSU72Q9NP77 MIR100-201ENST00000385259 80 ntBASIC1.52□□□□□ -2.17
SSU72Q9NP77 SNORD12-201ENST00000391002 90 ntBASIC1.52□□□□□ -2.17
SSU72Q9NP77 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.52□□□□□ -2.17
SSU72Q9NP77 Y_RNA.596-201ENST00000410462 109 ntBASIC1.52□□□□□ -2.17
SSU72Q9NP77 SNORA31.14-201ENST00000516728 116 ntBASIC1.52□□□□□ -2.17
SSU72Q9NP77 MIR502-201ENST00000606349 86 ntBASIC1.52□□□□□ -2.17
SSU72Q9NP77 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.52□□□□□ -2.17
SSU72Q9NP77 MIR1-1-201ENST00000362147 71 ntBASIC1.51□□□□□ -2.17
SSU72Q9NP77 RNU1-42P-201ENST00000364033 160 ntBASIC1.51□□□□□ -2.17
SSU72Q9NP77 Y_RNA.207-201ENST00000364142 106 ntBASIC1.51□□□□□ -2.17
SSU72Q9NP77 SNORA25.9-201ENST00000365087 128 ntBASIC1.51□□□□□ -2.17
SSU72Q9NP77 SNORA24B-201ENST00000384176 131 ntBASIC1.51□□□□□ -2.17
SSU72Q9NP77 MIR583-201ENST00000384846 75 ntBASIC1.51□□□□□ -2.17
SSU72Q9NP77 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.51□□□□□ -2.17
SSU72Q9NP77 RNU1-119P-201ENST00000391122 165 ntBASIC1.51□□□□□ -2.17
SSU72Q9NP77 AC074348.1-201ENST00000426503 132 ntBASIC1.51□□□□□ -2.17
SSU72Q9NP77 AL359821.1-201ENST00000605519 182 ntBASIC1.51□□□□□ -2.17
SSU72Q9NP77 BX248123.2-201ENST00000606318 124 ntBASIC1.51□□□□□ -2.17
SSU72Q9NP77 AL157834.3-201ENST00000615543 103 ntBASIC1.51□□□□□ -2.17
SSU72Q9NP77 RMST_2.1-201ENST00000617263 136 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 206.5 ms