Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 Y_RNA.56-201ENST00000362798 112 ntBASIC0.81□□□□□ -2.28
CLIP4Q8N3C7 Y_RNA.536-201ENST00000384621 113 ntBASIC0.81□□□□□ -2.28
CLIP4Q8N3C7 RNU6-535P-201ENST00000384722 107 ntBASIC0.81□□□□□ -2.28
CLIP4Q8N3C7 MIR635-201ENST00000384830 98 ntBASIC0.81□□□□□ -2.28
CLIP4Q8N3C7 SNORA40.13-201ENST00000516379 120 ntBASIC0.81□□□□□ -2.28
CLIP4Q8N3C7 MIR548H5-201ENST00000580314 60 ntBASIC0.81□□□□□ -2.28
CLIP4Q8N3C7 MIR4452-201ENST00000583004 71 ntBASIC0.81□□□□□ -2.28
CLIP4Q8N3C7 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CLIP4Q8N3C7 Y_RNA.342-201ENST00000365352 113 ntBASIC0.8□□□□□ -2.28
CLIP4Q8N3C7 SNORD114-22-201ENST00000365423 72 ntBASIC0.8□□□□□ -2.28
CLIP4Q8N3C7 RNU6-813P-201ENST00000384691 107 ntBASIC0.8□□□□□ -2.28
CLIP4Q8N3C7 RNU6-291P-201ENST00000384720 107 ntBASIC0.8□□□□□ -2.28
CLIP4Q8N3C7 MIR532-201ENST00000385025 91 ntBASIC0.8□□□□□ -2.28
CLIP4Q8N3C7 MTATP8P2-201ENST00000435212 202 ntBASIC0.8□□□□□ -2.28
CLIP4Q8N3C7 Y_RNA.677-201ENST00000516401 85 ntBASIC0.8□□□□□ -2.28
CLIP4Q8N3C7 AP003327.1-201ENST00000529684 127 ntBASIC0.8□□□□□ -2.28
CLIP4Q8N3C7 RNU6-1125P-201ENST00000363601 107 ntBASIC0.79□□□□□ -2.28
CLIP4Q8N3C7 Y_RNA.348-201ENST00000365403 103 ntBASIC0.79□□□□□ -2.28
CLIP4Q8N3C7 Y_RNA.466-201ENST00000384294 113 ntBASIC0.79□□□□□ -2.28
CLIP4Q8N3C7 RNU6-480P-201ENST00000384332 107 ntBASIC0.79□□□□□ -2.28
CLIP4Q8N3C7 RNU6-644P-201ENST00000391155 98 ntBASIC0.79□□□□□ -2.28
CLIP4Q8N3C7 SNORD99-201ENST00000408612 74 ntBASIC0.79□□□□□ -2.28
CLIP4Q8N3C7 RNU7-61P-201ENST00000515897 61 ntBASIC0.79□□□□□ -2.28
CLIP4Q8N3C7 MIR4698-201ENST00000577795 80 ntBASIC0.79□□□□□ -2.28
CLIP4Q8N3C7 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.79□□□□□ -2.28
CLIP4Q8N3C7 RNU7-10P-201ENST00000607194 63 ntBASIC0.79□□□□□ -2.28
CLIP4Q8N3C7 MIR2052-201ENST00000636055 55 ntBASIC0.79□□□□□ -2.28
CLIP4Q8N3C7 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.78□□□□□ -2.28
CLIP4Q8N3C7 Y_RNA.57-201ENST00000362806 113 ntBASIC0.78□□□□□ -2.28
CLIP4Q8N3C7 RNU6-1244P-201ENST00000363614 108 ntBASIC0.78□□□□□ -2.28
CLIP4Q8N3C7 RNA5SP245-201ENST00000364239 121 ntBASIC0.78□□□□□ -2.28
CLIP4Q8N3C7 RNA5SP117-201ENST00000365294 118 ntBASIC0.78□□□□□ -2.28
CLIP4Q8N3C7 MIR516A2-201ENST00000384888 90 ntBASIC0.78□□□□□ -2.28
CLIP4Q8N3C7 MIR181B2-201ENST00000385004 89 ntBASIC0.78□□□□□ -2.28
CLIP4Q8N3C7 MIR516A1-201ENST00000385033 90 ntBASIC0.78□□□□□ -2.28
CLIP4Q8N3C7 AC092628.1-201ENST00000436250 252 ntBASIC0.78□□□□□ -2.28
CLIP4Q8N3C7 AC002350.1-201ENST00000490759 375 ntBASIC0.78□□□□□ -2.28
CLIP4Q8N3C7 TRAJ51-201ENST00000504127 63 ntBASIC0.78□□□□□ -2.28
CLIP4Q8N3C7 RNU6-158P-201ENST00000517104 100 ntBASIC0.78□□□□□ -2.28
CLIP4Q8N3C7 MIR3973-201ENST00000579824 107 ntBASIC0.78□□□□□ -2.28
CLIP4Q8N3C7 AC103810.7-201ENST00000607821 91 ntBASIC0.78□□□□□ -2.28
CLIP4Q8N3C7 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
CLIP4Q8N3C7 SNORD114-2-201ENST00000363953 78 ntBASIC0.77□□□□□ -2.29
CLIP4Q8N3C7 RNU1-93P-201ENST00000364704 169 ntBASIC0.77□□□□□ -2.29
CLIP4Q8N3C7 RNU6-905P-201ENST00000384434 107 ntBASIC0.77□□□□□ -2.29
CLIP4Q8N3C7 MIR573-201ENST00000384964 99 ntBASIC0.77□□□□□ -2.29
CLIP4Q8N3C7 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.77□□□□□ -2.29
CLIP4Q8N3C7 SNORD63B-201ENST00000411005 70 ntBASIC0.77□□□□□ -2.29
CLIP4Q8N3C7 RNU7-106P-201ENST00000459514 67 ntBASIC0.77□□□□□ -2.29
CLIP4Q8N3C7 ACA64.5-201ENST00000516207 127 ntBASIC0.77□□□□□ -2.29
CLIP4Q8N3C7 SNORA31.14-201ENST00000516728 116 ntBASIC0.77□□□□□ -2.29
CLIP4Q8N3C7 Y_RNA.705-201ENST00000516862 110 ntBASIC0.77□□□□□ -2.29
CLIP4Q8N3C7 AC011195.1-201ENST00000578177 177 ntBASIC0.77□□□□□ -2.29
CLIP4Q8N3C7 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.77□□□□□ -2.29
CLIP4Q8N3C7 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.77□□□□□ -2.29
CLIP4Q8N3C7 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.76□□□□□ -2.29
CLIP4Q8N3C7 Y_RNA.96-201ENST00000363092 109 ntBASIC0.76□□□□□ -2.29
CLIP4Q8N3C7 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CLIP4Q8N3C7 RNU6-972P-201ENST00000391208 107 ntBASIC0.76□□□□□ -2.29
CLIP4Q8N3C7 RNU6-351P-201ENST00000516097 100 ntBASIC0.76□□□□□ -2.29
CLIP4Q8N3C7 AC138907.6-201ENST00000568401 126 ntBASIC0.76□□□□□ -2.29
CLIP4Q8N3C7 AC138869.1-201ENST00000568623 124 ntBASIC0.76□□□□□ -2.29
CLIP4Q8N3C7 uc_338.16-201ENST00000621804 95 ntBASIC0.76□□□□□ -2.29
CLIP4Q8N3C7 Y_RNA.32-201ENST00000362589 110 ntBASIC0.75□□□□□ -2.29
CLIP4Q8N3C7 RNU6-640P-201ENST00000363693 105 ntBASIC0.75□□□□□ -2.29
CLIP4Q8N3C7 Y_RNA.174-201ENST00000363781 105 ntBASIC0.75□□□□□ -2.29
CLIP4Q8N3C7 MIR608-201ENST00000384820 100 ntBASIC0.75□□□□□ -2.29
CLIP4Q8N3C7 MIR518E-201ENST00000385252 88 ntBASIC0.75□□□□□ -2.29
CLIP4Q8N3C7 RNU6-1254P-201ENST00000391266 104 ntBASIC0.75□□□□□ -2.29
CLIP4Q8N3C7 RNU6-887P-201ENST00000410660 100 ntBASIC0.75□□□□□ -2.29
CLIP4Q8N3C7 RNU6-162P-201ENST00000516228 103 ntBASIC0.75□□□□□ -2.29
CLIP4Q8N3C7 MIR3612-201ENST00000579753 87 ntBASIC0.75□□□□□ -2.29
CLIP4Q8N3C7 AL353765.1-201ENST00000605514 183 ntBASIC0.75□□□□□ -2.29
CLIP4Q8N3C7 MIR6857-201ENST00000613267 93 ntBASIC0.75□□□□□ -2.29
CLIP4Q8N3C7 MIR6767-201ENST00000637302 66 ntBASIC0.75□□□□□ -2.29
CLIP4Q8N3C7 MIR373-201ENST00000362273 69 ntBASIC0.74□□□□□ -2.29
CLIP4Q8N3C7 Y_RNA.508-201ENST00000384502 114 ntBASIC0.74□□□□□ -2.29
CLIP4Q8N3C7 MIR520E-201ENST00000384867 87 ntBASIC0.74□□□□□ -2.29
CLIP4Q8N3C7 RNU6-243P-201ENST00000391140 107 ntBASIC0.74□□□□□ -2.29
CLIP4Q8N3C7 AC244098.3-201ENST00000424803 96 ntBASIC0.74□□□□□ -2.29
CLIP4Q8N3C7 RNU7-195P-201ENST00000458793 62 ntBASIC0.74□□□□□ -2.29
CLIP4Q8N3C7 AL513043.2-201ENST00000573941 143 ntBASIC0.74□□□□□ -2.29
CLIP4Q8N3C7 MIR4653-201ENST00000585107 83 ntBASIC0.74□□□□□ -2.29
CLIP4Q8N3C7 AL078603.1-201ENST00000603824 313 ntBASIC0.74□□□□□ -2.29
CLIP4Q8N3C7 U7.3-201ENST00000616123 62 ntBASIC0.74□□□□□ -2.29
CLIP4Q8N3C7 AC025521.1-201ENST00000621624 286 ntBASIC0.74□□□□□ -2.29
CLIP4Q8N3C7 SNORD36A-201ENST00000362874 73 ntBASIC0.73□□□□□ -2.29
CLIP4Q8N3C7 SNORD58A-201ENST00000383875 65 ntBASIC0.73□□□□□ -2.29
CLIP4Q8N3C7 MIR644A-201ENST00000385262 94 ntBASIC0.73□□□□□ -2.29
CLIP4Q8N3C7 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.73□□□□□ -2.29
CLIP4Q8N3C7 RNY4P30-201ENST00000410216 95 ntBASIC0.73□□□□□ -2.29
CLIP4Q8N3C7 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.73□□□□□ -2.29
CLIP4Q8N3C7 RPS29P1-201ENST00000465274 159 ntBASIC0.73□□□□□ -2.29
CLIP4Q8N3C7 Y_RNA.809-201ENST00000516058 95 ntBASIC0.73□□□□□ -2.29
CLIP4Q8N3C7 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.73□□□□□ -2.29
CLIP4Q8N3C7 Y_RNA.118-201ENST00000363300 101 ntBASIC0.72□□□□□ -2.29
CLIP4Q8N3C7 Y_RNA.355-201ENST00000365462 98 ntBASIC0.72□□□□□ -2.29
CLIP4Q8N3C7 AC211469.2-201ENST00000605461 205 ntBASIC0.72□□□□□ -2.29
CLIP4Q8N3C7 Y_RNA.290-201ENST00000364879 114 ntBASIC0.71□□□□□ -2.3
CLIP4Q8N3C7 MIR599-201ENST00000385069 95 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 293.6 ms