Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 RNU6-1307P-201ENST00000391012 103 ntBASIC0.87□□□□□ -2.27
KRT9P35527 RNU6-644P-201ENST00000391155 98 ntBASIC0.87□□□□□ -2.27
KRT9P35527 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.87□□□□□ -2.27
KRT9P35527 AC096949.1-201ENST00000412047 152 ntBASIC0.87□□□□□ -2.27
KRT9P35527 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.87□□□□□ -2.27
KRT9P35527 AC109327.2-201ENST00000448339 378 ntBASIC0.87□□□□□ -2.27
KRT9P35527 RNU7-61P-201ENST00000515897 61 ntBASIC0.87□□□□□ -2.27
KRT9P35527 MIR5000-201ENST00000577717 103 ntBASIC0.87□□□□□ -2.27
KRT9P35527 MIR4439-201ENST00000583746 80 ntBASIC0.87□□□□□ -2.27
KRT9P35527 MALAT1.1-201ENST00000618249 95 ntBASIC0.87□□□□□ -2.27
KRT9P35527 MIR30D-201ENST00000362283 70 ntBASIC0.86□□□□□ -2.27
KRT9P35527 Y_RNA.247-201ENST00000364500 92 ntBASIC0.86□□□□□ -2.27
KRT9P35527 RNY1P2-201ENST00000364820 117 ntBASIC0.86□□□□□ -2.27
KRT9P35527 RNU6-813P-201ENST00000384691 107 ntBASIC0.86□□□□□ -2.27
KRT9P35527 RNU6-972P-201ENST00000391208 107 ntBASIC0.86□□□□□ -2.27
KRT9P35527 MIR548G-201ENST00000408442 89 ntBASIC0.86□□□□□ -2.27
KRT9P35527 SNORD93-201ENST00000408813 74 ntBASIC0.86□□□□□ -2.27
KRT9P35527 SNORD83.1-201ENST00000411362 77 ntBASIC0.86□□□□□ -2.27
KRT9P35527 RPS26P5-201ENST00000418544 335 ntBASIC0.86□□□□□ -2.27
KRT9P35527 MIR18B-201ENST00000454574 71 ntBASIC0.86□□□□□ -2.27
KRT9P35527 Y_RNA.705-201ENST00000516862 110 ntBASIC0.86□□□□□ -2.27
KRT9P35527 MIR4777-201ENST00000583710 86 ntBASIC0.86□□□□□ -2.27
KRT9P35527 MIR548Z-201ENST00000584743 97 ntBASIC0.86□□□□□ -2.27
KRT9P35527 MIR4653-201ENST00000585107 83 ntBASIC0.86□□□□□ -2.27
KRT9P35527 RNU6-86P-201ENST00000606534 107 ntBASIC0.86□□□□□ -2.27
KRT9P35527 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.86□□□□□ -2.27
KRT9P35527 uc_338.6-201ENST00000613544 171 ntBASIC0.86□□□□□ -2.27
KRT9P35527 AC091304.10-201ENST00000641554 121 ntBASIC0.86□□□□□ -2.27
KRT9P35527 Y_RNA.342-201ENST00000365352 113 ntBASIC0.85□□□□□ -2.27
KRT9P35527 MIR488-201ENST00000365739 83 ntBASIC0.85□□□□□ -2.27
KRT9P35527 RNU6-49P-201ENST00000384256 107 ntBASIC0.85□□□□□ -2.27
KRT9P35527 Y_RNA.467-201ENST00000384297 102 ntBASIC0.85□□□□□ -2.27
KRT9P35527 Y_RNA.567-201ENST00000384736 106 ntBASIC0.85□□□□□ -2.27
KRT9P35527 MIR216A-201ENST00000385063 110 ntBASIC0.85□□□□□ -2.27
KRT9P35527 U8.15-201ENST00000390947 134 ntBASIC0.85□□□□□ -2.27
KRT9P35527 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.85□□□□□ -2.27
KRT9P35527 RNU6-162P-201ENST00000516228 103 ntBASIC0.85□□□□□ -2.27
KRT9P35527 RNU6-1006P-201ENST00000516998 103 ntBASIC0.85□□□□□ -2.27
KRT9P35527 MIR4500-201ENST00000579472 76 ntBASIC0.85□□□□□ -2.27
KRT9P35527 U7.3-201ENST00000616123 62 ntBASIC0.85□□□□□ -2.27
KRT9P35527 Y_RNA.119-201ENST00000363301 96 ntBASIC0.84□□□□□ -2.27
KRT9P35527 RNA5SP133-201ENST00000363368 119 ntBASIC0.84□□□□□ -2.27
KRT9P35527 RNU6-934P-201ENST00000365154 107 ntBASIC0.84□□□□□ -2.27
KRT9P35527 RNY1P7-201ENST00000384743 110 ntBASIC0.84□□□□□ -2.27
KRT9P35527 SNORD105-201ENST00000386910 85 ntBASIC0.84□□□□□ -2.27
KRT9P35527 RNU6-887P-201ENST00000410660 100 ntBASIC0.84□□□□□ -2.27
KRT9P35527 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.84□□□□□ -2.27
KRT9P35527 U6.109-201ENST00000636749 87 ntBASIC0.84□□□□□ -2.27
KRT9P35527 MIR4679-1-201ENST00000637619 75 ntBASIC0.84□□□□□ -2.27
KRT9P35527 MIR6866-201ENST00000638146 69 ntBASIC0.84□□□□□ -2.27
KRT9P35527 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
KRT9P35527 RNU6-369P-201ENST00000362515 102 ntBASIC0.83□□□□□ -2.28
KRT9P35527 RNU6-1125P-201ENST00000363601 107 ntBASIC0.83□□□□□ -2.28
KRT9P35527 RNU6-1163P-201ENST00000364516 107 ntBASIC0.83□□□□□ -2.28
KRT9P35527 RNU6-480P-201ENST00000384332 107 ntBASIC0.83□□□□□ -2.28
KRT9P35527 Y_RNA.558-201ENST00000384685 113 ntBASIC0.83□□□□□ -2.28
KRT9P35527 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.83□□□□□ -2.28
KRT9P35527 RNU6-844P-201ENST00000517175 102 ntBASIC0.83□□□□□ -2.28
KRT9P35527 AC138749.4-201ENST00000563970 127 ntBASIC0.83□□□□□ -2.28
KRT9P35527 AC090897.1-201ENST00000580909 226 ntBASIC0.83□□□□□ -2.28
KRT9P35527 RNU6-403P-201ENST00000363163 104 ntBASIC0.82□□□□□ -2.28
KRT9P35527 Y_RNA.290-201ENST00000364879 114 ntBASIC0.82□□□□□ -2.28
KRT9P35527 RNU6-1134P-201ENST00000365156 101 ntBASIC0.82□□□□□ -2.28
KRT9P35527 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
KRT9P35527 RNU6-110P-201ENST00000384508 104 ntBASIC0.82□□□□□ -2.28
KRT9P35527 AC026421.1-201ENST00000519101 163 ntBASIC0.82□□□□□ -2.28
KRT9P35527 CYP3A137P-201ENST00000562436 69 ntBASIC0.82□□□□□ -2.28
KRT9P35527 MIR4491-201ENST00000581087 68 ntBASIC0.82□□□□□ -2.28
KRT9P35527 RN7SL793P-201ENST00000583259 296 ntBASIC0.82□□□□□ -2.28
KRT9P35527 AC103810.7-201ENST00000607821 91 ntBASIC0.82□□□□□ -2.28
KRT9P35527 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
KRT9P35527 HSBP1P2-201ENST00000299671 229 ntBASIC0.81□□□□□ -2.28
KRT9P35527 Y_RNA.173-201ENST00000363776 113 ntBASIC0.81□□□□□ -2.28
KRT9P35527 SNORD58A-201ENST00000383875 65 ntBASIC0.81□□□□□ -2.28
KRT9P35527 SNORA72.6-201ENST00000384520 129 ntBASIC0.81□□□□□ -2.28
KRT9P35527 MIR1257-201ENST00000408490 117 ntBASIC0.81□□□□□ -2.28
KRT9P35527 RNU4-83P-201ENST00000410863 133 ntBASIC0.81□□□□□ -2.28
KRT9P35527 AL606490.4-201ENST00000423117 127 ntBASIC0.81□□□□□ -2.28
KRT9P35527 RNU7-185P-201ENST00000459215 60 ntBASIC0.81□□□□□ -2.28
KRT9P35527 SNORA72.7-201ENST00000516349 94 ntBASIC0.81□□□□□ -2.28
KRT9P35527 MIR4771-2-201ENST00000577758 74 ntBASIC0.81□□□□□ -2.28
KRT9P35527 AC011195.1-201ENST00000578177 177 ntBASIC0.81□□□□□ -2.28
KRT9P35527 MIR4771-1-201ENST00000582617 74 ntBASIC0.81□□□□□ -2.28
KRT9P35527 RNU4-58P-201ENST00000363192 141 ntBASIC0.8□□□□□ -2.28
KRT9P35527 RNU6-1244P-201ENST00000363614 108 ntBASIC0.8□□□□□ -2.28
KRT9P35527 SNORD116-10-201ENST00000363791 102 ntBASIC0.8□□□□□ -2.28
KRT9P35527 Y_RNA.190-201ENST00000363964 101 ntBASIC0.8□□□□□ -2.28
KRT9P35527 SNORD73B-201ENST00000364394 72 ntBASIC0.8□□□□□ -2.28
KRT9P35527 RNU1-119P-201ENST00000391122 165 ntBASIC0.8□□□□□ -2.28
KRT9P35527 AC244098.3-201ENST00000424803 96 ntBASIC0.8□□□□□ -2.28
KRT9P35527 RNU6-531P-201ENST00000516694 104 ntBASIC0.8□□□□□ -2.28
KRT9P35527 MIR4714-201ENST00000580728 77 ntBASIC0.8□□□□□ -2.28
KRT9P35527 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.8□□□□□ -2.28
KRT9P35527 MIR101-2-201ENST00000362195 79 ntBASIC0.79□□□□□ -2.28
KRT9P35527 RNU6-571P-201ENST00000384128 107 ntBASIC0.79□□□□□ -2.28
KRT9P35527 MIR181B2-201ENST00000385004 89 ntBASIC0.79□□□□□ -2.28
KRT9P35527 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
KRT9P35527 BX276092.1-201ENST00000427368 251 ntBASIC0.79□□□□□ -2.28
KRT9P35527 SNORA25.16-201ENST00000516741 121 ntBASIC0.79□□□□□ -2.28
KRT9P35527 MIR8066-201ENST00000617280 78 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 190.1 ms