Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AL512310.12-203ENST00000640543 90 ntBASIC0.64□□□□□ -2.31
HOXA13P31271 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
HOXA13P31271 MIR18A-201ENST00000362310 71 ntBASIC0.63□□□□□ -2.31
HOXA13P31271 RNA5SP347-201ENST00000362445 119 ntBASIC0.63□□□□□ -2.31
HOXA13P31271 SNORA63.4-201ENST00000362763 126 ntBASIC0.63□□□□□ -2.31
HOXA13P31271 Y_RNA.309-201ENST00000365046 111 ntBASIC0.63□□□□□ -2.31
HOXA13P31271 Y_RNA.323-201ENST00000365157 109 ntBASIC0.63□□□□□ -2.31
HOXA13P31271 RNY4P18-201ENST00000391107 89 ntBASIC0.63□□□□□ -2.31
HOXA13P31271 MIR936-201ENST00000401264 98 ntBASIC0.63□□□□□ -2.31
HOXA13P31271 MIR1912-201ENST00000410389 80 ntBASIC0.63□□□□□ -2.31
HOXA13P31271 RNU6-554P-201ENST00000410466 106 ntBASIC0.63□□□□□ -2.31
HOXA13P31271 SNRPGP12-201ENST00000449481 213 ntBASIC0.63□□□□□ -2.31
HOXA13P31271 TRAJ51-201ENST00000504127 63 ntBASIC0.63□□□□□ -2.31
HOXA13P31271 RNU6-229P-201ENST00000516614 102 ntBASIC0.63□□□□□ -2.31
HOXA13P31271 Y_RNA.709-201ENST00000516952 92 ntBASIC0.63□□□□□ -2.31
HOXA13P31271 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.62□□□□□ -2.31
HOXA13P31271 RNU6-215P-201ENST00000365169 102 ntBASIC0.62□□□□□ -2.31
HOXA13P31271 RNA5SP193-201ENST00000410353 107 ntBASIC0.62□□□□□ -2.31
HOXA13P31271 Y_RNA.629-201ENST00000411368 105 ntBASIC0.62□□□□□ -2.31
HOXA13P31271 AL442128.1-201ENST00000615151 90 ntBASIC0.62□□□□□ -2.31
HOXA13P31271 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
HOXA13P31271 RNU6-834P-201ENST00000362367 110 ntBASIC0.61□□□□□ -2.31
HOXA13P31271 RNU6-832P-201ENST00000363319 107 ntBASIC0.61□□□□□ -2.31
HOXA13P31271 RNU6-1099P-201ENST00000363533 107 ntBASIC0.61□□□□□ -2.31
HOXA13P31271 RNU6-106P-201ENST00000384405 107 ntBASIC0.61□□□□□ -2.31
HOXA13P31271 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
HOXA13P31271 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.61□□□□□ -2.31
HOXA13P31271 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.61□□□□□ -2.31
HOXA13P31271 RNA5SP121-201ENST00000516537 101 ntBASIC0.61□□□□□ -2.31
HOXA13P31271 RNU6-850P-201ENST00000516934 103 ntBASIC0.61□□□□□ -2.31
HOXA13P31271 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.61□□□□□ -2.31
HOXA13P31271 AC141557.1-201ENST00000540982 400 ntBASIC0.61□□□□□ -2.31
HOXA13P31271 MIR4711-201ENST00000578274 70 ntBASIC0.61□□□□□ -2.31
HOXA13P31271 MIR4694-201ENST00000578534 80 ntBASIC0.61□□□□□ -2.31
HOXA13P31271 MIR101-2-201ENST00000362195 79 ntBASIC0.6□□□□□ -2.31
HOXA13P31271 Y_RNA.163-201ENST00000363702 113 ntBASIC0.6□□□□□ -2.31
HOXA13P31271 RNA5SP117-201ENST00000365294 118 ntBASIC0.6□□□□□ -2.31
HOXA13P31271 MIR140-201ENST00000385282 100 ntBASIC0.6□□□□□ -2.31
HOXA13P31271 RNU4-54P-201ENST00000516428 129 ntBASIC0.6□□□□□ -2.31
HOXA13P31271 RNU6-1018P-201ENST00000516577 106 ntBASIC0.6□□□□□ -2.31
HOXA13P31271 RNY3P2-201ENST00000362918 102 ntBASIC0.59□□□□□ -2.31
HOXA13P31271 SNORD18A-201ENST00000363753 72 ntBASIC0.59□□□□□ -2.31
HOXA13P31271 SNORD38.1-201ENST00000363863 68 ntBASIC0.59□□□□□ -2.31
HOXA13P31271 RNU6-945P-201ENST00000383947 107 ntBASIC0.59□□□□□ -2.31
HOXA13P31271 MIR548G-201ENST00000408442 89 ntBASIC0.59□□□□□ -2.31
HOXA13P31271 SPINT5P-201ENST00000448174 155 ntBASIC0.59□□□□□ -2.31
HOXA13P31271 RNU7-106P-201ENST00000459514 67 ntBASIC0.59□□□□□ -2.31
HOXA13P31271 MIR3678-201ENST00000578455 94 ntBASIC0.59□□□□□ -2.31
HOXA13P31271 MIR450A1-201ENST00000362262 91 ntBASIC0.58□□□□□ -2.32
HOXA13P31271 Y_RNA.49-201ENST00000362714 112 ntBASIC0.58□□□□□ -2.32
HOXA13P31271 SNORA36.1-201ENST00000363424 132 ntBASIC0.58□□□□□ -2.32
HOXA13P31271 RNU6-1163P-201ENST00000364516 107 ntBASIC0.58□□□□□ -2.32
HOXA13P31271 RNU4-45P-201ENST00000365469 141 ntBASIC0.58□□□□□ -2.32
HOXA13P31271 Y_RNA.377-201ENST00000365644 108 ntBASIC0.58□□□□□ -2.32
HOXA13P31271 RNU6-44P-201ENST00000384045 107 ntBASIC0.58□□□□□ -2.32
HOXA13P31271 MIR590-201ENST00000385008 97 ntBASIC0.58□□□□□ -2.32
HOXA13P31271 SNORD63B-201ENST00000411005 70 ntBASIC0.58□□□□□ -2.32
HOXA13P31271 RNU7-195P-201ENST00000458793 62 ntBASIC0.58□□□□□ -2.32
HOXA13P31271 RNU6-795P-201ENST00000516323 103 ntBASIC0.58□□□□□ -2.32
HOXA13P31271 AC018659.1-201ENST00000551083 169 ntBASIC0.58□□□□□ -2.32
HOXA13P31271 MTND5P40-201ENST00000559945 246 ntBASIC0.58□□□□□ -2.32
HOXA13P31271 MIR548AI-201ENST00000579940 88 ntBASIC0.58□□□□□ -2.32
HOXA13P31271 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.58□□□□□ -2.32
HOXA13P31271 Y_RNA.56-201ENST00000362798 112 ntBASIC0.57□□□□□ -2.32
HOXA13P31271 SNORD114-26-201ENST00000363543 72 ntBASIC0.57□□□□□ -2.32
HOXA13P31271 Y_RNA.173-201ENST00000363776 113 ntBASIC0.57□□□□□ -2.32
HOXA13P31271 Y_RNA.467-201ENST00000384297 102 ntBASIC0.57□□□□□ -2.32
HOXA13P31271 MIR516A2-201ENST00000384888 90 ntBASIC0.57□□□□□ -2.32
HOXA13P31271 MIR516A1-201ENST00000385033 90 ntBASIC0.57□□□□□ -2.32
HOXA13P31271 MIR216A-201ENST00000385063 110 ntBASIC0.57□□□□□ -2.32
HOXA13P31271 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.57□□□□□ -2.32
HOXA13P31271 AC109327.2-201ENST00000448339 378 ntBASIC0.57□□□□□ -2.32
HOXA13P31271 Y_RNA.659-201ENST00000515994 113 ntBASIC0.57□□□□□ -2.32
HOXA13P31271 RNU6-904P-201ENST00000516206 101 ntBASIC0.57□□□□□ -2.32
HOXA13P31271 RNU6-109P-201ENST00000516364 107 ntBASIC0.57□□□□□ -2.32
HOXA13P31271 RNU6-412P-201ENST00000516434 106 ntBASIC0.57□□□□□ -2.32
HOXA13P31271 RNU6-184P-201ENST00000516514 107 ntBASIC0.57□□□□□ -2.32
HOXA13P31271 RNA5SP480-201ENST00000516840 109 ntBASIC0.57□□□□□ -2.32
HOXA13P31271 RNU6-537P-201ENST00000517277 103 ntBASIC0.57□□□□□ -2.32
HOXA13P31271 AC012531.4-201ENST00000616509 177 ntBASIC0.57□□□□□ -2.32
HOXA13P31271 AC243829.3-201ENST00000622177 108 ntBASIC0.57□□□□□ -2.32
HOXA13P31271 RNU6-170P-201ENST00000362832 104 ntBASIC0.56□□□□□ -2.32
HOXA13P31271 RNU6-571P-201ENST00000384128 107 ntBASIC0.56□□□□□ -2.32
HOXA13P31271 AL157398.1-201ENST00000452981 186 ntBASIC0.56□□□□□ -2.32
HOXA13P31271 RNA5SP94-201ENST00000516917 108 ntBASIC0.56□□□□□ -2.32
HOXA13P31271 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.56□□□□□ -2.32
HOXA13P31271 RNU6-1244P-201ENST00000363614 108 ntBASIC0.55□□□□□ -2.32
HOXA13P31271 Y_RNA.567-201ENST00000384736 106 ntBASIC0.55□□□□□ -2.32
HOXA13P31271 AL035461.1-201ENST00000421490 332 ntBASIC0.55□□□□□ -2.32
HOXA13P31271 AL161932.1-201ENST00000437408 146 ntBASIC0.55□□□□□ -2.32
HOXA13P31271 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.55□□□□□ -2.32
HOXA13P31271 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
HOXA13P31271 Y_RNA.466-201ENST00000384294 113 ntBASIC0.54□□□□□ -2.32
HOXA13P31271 AC244505.6-201ENST00000452829 130 ntBASIC0.54□□□□□ -2.32
HOXA13P31271 RNU6-469P-201ENST00000516253 101 ntBASIC0.54□□□□□ -2.32
HOXA13P31271 RNU6-919P-201ENST00000516731 104 ntBASIC0.54□□□□□ -2.32
HOXA13P31271 RNU7-161P-201ENST00000517289 62 ntBASIC0.54□□□□□ -2.32
HOXA13P31271 MIR548H5-201ENST00000580314 60 ntBASIC0.54□□□□□ -2.32
HOXA13P31271 RN7SL793P-201ENST00000583259 296 ntBASIC0.54□□□□□ -2.32
HOXA13P31271 MIR4777-201ENST00000583710 86 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 222.4 ms