Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 MIR7-2-201ENST00000384970 110 ntBASIC2.74□□□□□ -1.97
CHGAP10645 SNORA75.2-201ENST00000391138 150 ntBASIC2.74□□□□□ -1.97
CHGAP10645 SNORA75.3-201ENST00000391231 150 ntBASIC2.74□□□□□ -1.97
CHGAP10645 snoU13.18-201ENST00000459483 104 ntBASIC2.74□□□□□ -1.97
CHGAP10645 SNORA31.2-201ENST00000516019 134 ntBASIC2.74□□□□□ -1.97
CHGAP10645 AL096840.1-201ENST00000603287 93 ntBASIC2.74□□□□□ -1.97
CHGAP10645 AL359821.1-201ENST00000605519 182 ntBASIC2.74□□□□□ -1.97
CHGAP10645 AC106800.4-201ENST00000614905 153 ntBASIC2.74□□□□□ -1.97
CHGAP10645 TRDV1-202ENST00000621643 102 ntBASIC2.74□□□□□ -1.97
CHGAP10645 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CHGAP10645 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CHGAP10645 Y_RNA.42-201ENST00000362660 108 ntBASIC2.73□□□□□ -1.97
CHGAP10645 MIR9-3-201ENST00000385084 90 ntBASIC2.73□□□□□ -1.97
CHGAP10645 AC015818.7-201ENST00000428754 109 ntBASIC2.73□□□□□ -1.97
CHGAP10645 AC008834.1-201ENST00000511612 175 ntBASIC2.73□□□□□ -1.97
CHGAP10645 Y_RNA.697-201ENST00000516776 113 ntBASIC2.73□□□□□ -1.97
CHGAP10645 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.73□□□□□ -1.97
CHGAP10645 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.72□□□□□ -1.97
CHGAP10645 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.72□□□□□ -1.97
CHGAP10645 RPS26P5-201ENST00000418544 335 ntBASIC2.72□□□□□ -1.97
CHGAP10645 RPS27P16-201ENST00000425758 201 ntBASIC2.72□□□□□ -1.97
CHGAP10645 AC097635.1-201ENST00000450678 155 ntBASIC2.72□□□□□ -1.97
CHGAP10645 MIR514B-201ENST00000516774 80 ntBASIC2.72□□□□□ -1.97
CHGAP10645 AL591704.2-201ENST00000421658 181 ntBASIC2.71□□□□□ -1.98
CHGAP10645 RNU7-156P-201ENST00000517214 74 ntBASIC2.71□□□□□ -1.98
CHGAP10645 AC138907.6-201ENST00000568401 126 ntBASIC2.71□□□□□ -1.98
CHGAP10645 AC138869.1-201ENST00000568623 124 ntBASIC2.71□□□□□ -1.98
CHGAP10645 MIR1297-201ENST00000637311 77 ntBASIC2.71□□□□□ -1.98
CHGAP10645 RNU6-208P-201ENST00000362431 107 ntBASIC2.7□□□□□ -1.98
CHGAP10645 RNA5SP82-201ENST00000516707 92 ntBASIC2.7□□□□□ -1.98
CHGAP10645 RNU6-807P-201ENST00000516805 107 ntBASIC2.7□□□□□ -1.98
CHGAP10645 RNU6-448P-201ENST00000517052 107 ntBASIC2.7□□□□□ -1.98
CHGAP10645 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CHGAP10645 Y_RNA.239-201ENST00000364444 113 ntBASIC2.69□□□□□ -1.98
CHGAP10645 MIR520H-201ENST00000385126 88 ntBASIC2.69□□□□□ -1.98
CHGAP10645 MIR6840-201ENST00000611937 71 ntBASIC2.69□□□□□ -1.98
CHGAP10645 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.67□□□□□ -1.98
CHGAP10645 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CHGAP10645 Y_RNA.363-201ENST00000365529 113 ntBASIC2.67□□□□□ -1.98
CHGAP10645 MIR676-201ENST00000390702 67 ntBASIC2.67□□□□□ -1.98
CHGAP10645 RNU7-21P-201ENST00000459430 62 ntBASIC2.67□□□□□ -1.98
CHGAP10645 RNU6-902P-201ENST00000517212 91 ntBASIC2.67□□□□□ -1.98
CHGAP10645 MIR4676-201ENST00000583078 72 ntBASIC2.67□□□□□ -1.98
CHGAP10645 AL645939.4-201ENST00000604495 135 ntBASIC2.67□□□□□ -1.98
CHGAP10645 Y_RNA.788-201ENST00000622394 112 ntBASIC2.67□□□□□ -1.98
CHGAP10645 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.66□□□□□ -1.98
CHGAP10645 SNORA80D-201ENST00000384488 135 ntBASIC2.66□□□□□ -1.98
CHGAP10645 RNU4-62P-201ENST00000410125 130 ntBASIC2.66□□□□□ -1.98
CHGAP10645 AP1B1P2-201ENST00000416196 106 ntBASIC2.66□□□□□ -1.98
CHGAP10645 AL606490.4-201ENST00000423117 127 ntBASIC2.66□□□□□ -1.98
CHGAP10645 SCARNA18B-201ENST00000458806 135 ntBASIC2.66□□□□□ -1.98
CHGAP10645 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.66□□□□□ -1.98
CHGAP10645 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
CHGAP10645 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
CHGAP10645 RNU6-664P-201ENST00000362381 107 ntBASIC2.65□□□□□ -1.99
CHGAP10645 Y_RNA.224-201ENST00000364308 111 ntBASIC2.65□□□□□ -1.99
CHGAP10645 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CHGAP10645 RNU6-364P-201ENST00000384387 107 ntBASIC2.65□□□□□ -1.99
CHGAP10645 RNU7-40P-201ENST00000516397 64 ntBASIC2.65□□□□□ -1.99
CHGAP10645 AC023827.1-201ENST00000569247 97 ntBASIC2.65□□□□□ -1.99
CHGAP10645 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.65□□□□□ -1.99
CHGAP10645 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CHGAP10645 RNY4P3-201ENST00000365254 95 ntBASIC2.64□□□□□ -1.99
CHGAP10645 SNORD101-201ENST00000384027 73 ntBASIC2.64□□□□□ -1.99
CHGAP10645 MIR599-201ENST00000385069 95 ntBASIC2.64□□□□□ -1.99
CHGAP10645 RNU6-788P-201ENST00000390967 104 ntBASIC2.64□□□□□ -1.99
CHGAP10645 MIR938-201ENST00000401216 83 ntBASIC2.64□□□□□ -1.99
CHGAP10645 RNA5SP489-201ENST00000410986 109 ntBASIC2.64□□□□□ -1.99
CHGAP10645 RNU6-411P-201ENST00000384451 107 ntBASIC2.63□□□□□ -1.99
CHGAP10645 MIR934-201ENST00000401241 83 ntBASIC2.63□□□□□ -1.99
CHGAP10645 RNU7-90P-201ENST00000459216 62 ntBASIC2.63□□□□□ -1.99
CHGAP10645 AC025033.1-201ENST00000463883 194 ntBASIC2.63□□□□□ -1.99
CHGAP10645 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.63□□□□□ -1.99
CHGAP10645 RNU6-303P-201ENST00000517091 106 ntBASIC2.63□□□□□ -1.99
CHGAP10645 MIR5694-201ENST00000581190 76 ntBASIC2.63□□□□□ -1.99
CHGAP10645 MIR4303-201ENST00000581299 66 ntBASIC2.63□□□□□ -1.99
CHGAP10645 MIR4696-201ENST00000581431 70 ntBASIC2.63□□□□□ -1.99
CHGAP10645 MTRNR2L2-201ENST00000604882 87 ntBASIC2.63□□□□□ -1.99
CHGAP10645 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.63□□□□□ -1.99
CHGAP10645 RNU5F-1-201ENST00000362507 117 ntBASIC2.62□□□□□ -1.99
CHGAP10645 RNU6-1051P-201ENST00000365471 102 ntBASIC2.62□□□□□ -1.99
CHGAP10645 RNU6-535P-201ENST00000384722 107 ntBASIC2.62□□□□□ -1.99
CHGAP10645 SNORD90-201ENST00000391145 111 ntBASIC2.62□□□□□ -1.99
CHGAP10645 RNU6-523P-201ENST00000516304 54 ntBASIC2.62□□□□□ -1.99
CHGAP10645 AC027335.2-201ENST00000624030 375 ntBASIC2.62□□□□□ -1.99
CHGAP10645 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CHGAP10645 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CHGAP10645 MIR144-201ENST00000384886 86 ntBASIC2.61□□□□□ -1.99
CHGAP10645 Y_RNA.596-201ENST00000410462 109 ntBASIC2.61□□□□□ -1.99
CHGAP10645 AC004223.1-201ENST00000479840 271 ntBASIC2.61□□□□□ -1.99
CHGAP10645 MIR3134-201ENST00000579433 74 ntBASIC2.61□□□□□ -1.99
CHGAP10645 U6.100-201ENST00000636230 99 ntBASIC2.61□□□□□ -1.99
CHGAP10645 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CHGAP10645 Y_RNA.532-201ENST00000384590 113 ntBASIC2.6□□□□□ -1.99
CHGAP10645 RNU6-910P-201ENST00000390844 107 ntBASIC2.6□□□□□ -1.99
CHGAP10645 RNU1-40P-201ENST00000516816 164 ntBASIC2.6□□□□□ -1.99
CHGAP10645 RNU1-97P-201ENST00000516872 164 ntBASIC2.6□□□□□ -1.99
CHGAP10645 YWHAEP2-201ENST00000580066 112 ntBASIC2.6□□□□□ -1.99
CHGAP10645 YWHAEP3-201ENST00000582767 121 ntBASIC2.6□□□□□ -1.99
CHGAP10645 RNU6-291P-201ENST00000384720 107 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 222.5 ms